mRNA_H-paniculata_contig39107.10184.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR) HSP 1 Score: 154 bits (388), Expect = 1.290e-38 Identity = 104/343 (30.32%), Postives = 157/343 (45.77%), Query Frame = 1
Query: 4 PKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLPP-----------------------------------------------------ETNLLVA-VYVDDLVIAGRHENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
P+S E + +W+AAM+ E L NGTW+ G LP GRKAI +KW+F K +DGS+ +YKARLVAQGFSQ+ G+D+F+T + AYL+ P+EEE++ + P E L +A V+VDD + G +D FK ++++ F + G+LS +G++V NG I+I Q Y+ +L+R+G +C+ V TP++ VK+ P++ Y +GSLMYA+TGTRPDIA+A ++ P + K +F
Sbjct: 832 PRSVDECKTRDDWPQWKAAMDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYVLIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHEGKLNMALVHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVT--RKNGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPAD-----VPYAAAIGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVF 1164
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A2P4Y5K5_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5K5_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.670e-38 Identity = 97/263 (36.88%), Postives = 147/263 (55.89%), Query Frame = 1
Query: 1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAYLN-APVEEELFFKLPPETNLLVAVYVDDLVIAGRH-ENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
EPK E + G R A+ E ++ G + + +LP ++A+ TKW+FK K DGS+ +YKARLVA+GF Q G D+ ET + +N P L+ K+ +L+ VYVDD+++ G E I E K + RF M D G S +LGIEV D +G++T+SQ YI+++L+R+G +C+ +PV+ +K+ ++ K P +R VG+L + T TRP+IA+A +R ME+P E KRIF
Sbjct: 600 EPKPFQEAVNGSGQAHRRKAIRAELKSMRLRGVFRA---AKLPNNQRAVGTKWVFKIKRNADGSIEKYKARLVAKGFVQKYGIDYTETLSPVVNYGPC---LYIKIVNSECVLLLVYVDDVLVTGNSAELIAEVKRQLKSRFEMTDSGKCSFILGIEV-VDNADGSVTLSQARYIKDILERFGMQDCKPTASPVDISMKLVSSDATTKLGAP------FREAVGALTHLMTSTRPNIAFAVGYVSRFMENPQVEHWIAVKRIF 849
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 151 bits (382), Expect = 8.200e-38 Identity = 108/345 (31.30%), Postives = 159/345 (46.09%), Query Frame = 1
Query: 4 PKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLPP------------------------ETN------------------------------LLVAVYVDDLVIAGRH-ENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKV--KISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRI 780
P+S E E +W+ AM+EE + + GT+ ED LPAGR I KW+F +K EDG+++RYKARLVAQG+SQ+ G D+ ET A AYLN +EEE++ + P E N ++ V+VDDL+I E++ E K + F +KDLG +++GIE++ D NGTI++SQ YI VL R+G R V TP++ V K + P+ G Y+ ++GSL+YA+ GTRPDI++A + + +P E + KR+
Sbjct: 879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG----YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRV 1216
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A438IJY3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IJY3_VITVI) HSP 1 Score: 150 bits (379), Expect = 2.000e-37 Identity = 95/273 (34.80%), Postives = 141/273 (51.65%), Query Frame = 1
Query: 1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAY-----------LNAPVEEELFFKLPPETNLLVAVYVDDLVIAGRHENI-DEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNST-EYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRI 780
+P S + + ++EKW AM++E ++ NG W+ + LP G K I KWIFK K G++ RYKA LVA+GF+Q EG D+ ET + L V++ ++ K +++ +YVDD+++A + E K +S +F MKDLG+ S VLGI++ D G + +SQ +YI +VL R+G C TPV K S+ + E Y +GSLMYA TRPDIAY R + +P + KR+
Sbjct: 747 DPISVSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVE---LPKGVKLIGCKWIFKIKRDSKGNIVRYKAHLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALENTVDQCIYLKFSGTKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILRLSQKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAIGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 1016
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: UPI000B76FC47 (uncharacterized protein LOC110661558 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76FC47) HSP 1 Score: 149 bits (376), Expect = 4.890e-37 Identity = 99/248 (39.92%), Postives = 141/248 (56.85%), Query Frame = 1
Query: 43 EKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA--AYLNAPVEEELFFKLP------------PETNLLVAVYVDDLVIAGRHEN-IDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRME 741
E+WRAAM +E AL NGTW E+ L G+K I KW++K K DGSV RYK RLV G +QVEG DF + + A+L+ +EEE+ K+P L V +YVDDL+I+ + + +FK+ +S+ F MKDLG L LGIEV + NG I + Q Y+ +V+ G C+ TP+E K+++ ES D +P +YR +VG L+Y T TRP+++Y H A+ M+
Sbjct: 505 ERWRAAMRKEIQALEDNGTWTVEN---LSFGKKTIGRKWVYKIKYNSDGSVKRYKTRLVILGNNQVEGIDFHQMDVQNAFLHGDLEEEVDIKIPLGFASQLPRKVSGTVQLNVLIYVDDLIISSNDVSAVQKFKNYLSRCFHMKDLGKLKFFLGIEVARNS-NG-IFLCQRKYVLDVISEVGLLGCKPAKTPLEQNHKLALTESEDM-DDP----AQYRRLVGRLIYL-TITRPELSYCVHILAQFMQ 741
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A699GM13_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699GM13_TANCI) HSP 1 Score: 147 bits (372), Expect = 1.040e-36 Identity = 93/275 (33.82%), Postives = 150/275 (54.55%), Query Frame = 1
Query: 1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAYLNAPVEEELFFKLPPETNLLVAVY----------VDDLVIAGRHEN----IDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
+P++ E ++ ++A W+ A+E+E G++++N TW D LP G K + KWIFKRK+K DG++ ++KA LV QGF Q EG D+F+T A LF +P NL++ +D+ V + + +D+ K +S RF MKD+G +LGI+++ + N I I+Q YI ++LK++ +C V TP++ K+ + + KP + EY +G LMYA T TR DIAYA + +R +P ++ R+F
Sbjct: 329 DPRTYNEAMQSRDAAFWKEAIEDEIGSIMENNTWVLSD---LPRGYKPLGCKWIFKRKMKVDGTIDKFKAPLVVQGFRQTEGIDYFDTYAPVARITTIR-LFLAIPAIHNLVIHQMDVKTTFLNGDLDEKVYMKQPKGFFMPVDKTKKFLSSRFSMKDMGETDDILGIKIKRE--NKRIVITQSHYIEKILKKFNREDCSPVSTPMDPVEKLKL--NTGKPID----QLEYSKAIGCLMYAMTSTRLDIAYAVGRLSRFTSNPSRQLWKAITRVF 591
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A438GQ37_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GQ37_VITVI) HSP 1 Score: 147 bits (371), Expect = 2.070e-36 Identity = 99/291 (34.02%), Postives = 141/291 (48.45%), Query Frame = 1
Query: 1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFET-----------------------------NAAYLNAPVEEELFFKLPPETNLLVAVYVDDLVIAGRHENI-DEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNG-NSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRI 780
+P + + +K ++KW AM EE+ ++ N WE LP G K I KWIFK K +G+V RYKARL+A+GF+Q EG DF ET A+LN ++E ++ + + +YVDD+++A +I + K +S+ F MKDLG S VLGI++ D G + +SQ +YI +VL+RYG + TPV K S+ + E Y VGSLMYA TRPDIAY R + +P KR+
Sbjct: 397 DPINFQQAMKSSNSQKWIEAMNEEYKSMQDNKVWELVP---LPVGTKPIGCKWIFKTKRDSNGNVERYKARLIAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMW---SKYIFLVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMNHWRAAKRV 681
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A6L2P354_TANCI (Uncharacterized protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2P354_TANCI) HSP 1 Score: 146 bits (369), Expect = 4.040e-36 Identity = 94/285 (32.98%), Postives = 150/285 (52.63%), Query Frame = 1
Query: 34 QEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLPPE-----TNLLVAVYVDDLVIAGRHEN-IDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
+E+ + A+++E G+++KN TW D LP G K + KWIFKRK+K DG++ ++KARL+ QGF Q EG +F+T A A+LN ++EE++ K P +++ +YVD+++I +N +DE K +S RF MKD+G +LGI+++ + N I I+Q YI ++LK++ +C V P++ K+ + KP + EY +G LMYA TRPDIAYA + +R +P ++ R F
Sbjct: 663 EESRDQKEAIDDEIGSVMKNNTWVLSD---LPHGCKPLGCKWIFKRKMKVDGTIDKFKARLIIQGFRQKEGIGYFDTYALVARITTIRLLLALAAIHNLVIHQMDVKTAFLNGDLDEEVYMKQPKGFVMSGKRVIICLYVDNMLIFRTDQNQVDETKKFLSSRFLMKDMGKADVILGIKIKRE--NKGIVITQSHYIEKILKKFNREDCSPVSIPMDPVEKLKP--NTRKPID----QLEYSRAIGCLMYAMISTRPDIAYAVGRLSRFTSNPSRQHWKAIIRAF 936
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A2N9GMX8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GMX8_FAGSY) HSP 1 Score: 142 bits (359), Expect = 5.760e-36 Identity = 99/264 (37.50%), Postives = 140/264 (53.03%), Query Frame = 1
Query: 52 RAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA------AYLNAPVEEELFFKLPP------------------------ETNL-LVAVYVDDLVIAGRHE-NIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDP 747
R AM +E AL K TW D LP G+ A+ KW++K K + DGSV RYKARLVA+GF+Q G D+ ET A A+LN + EE++ + PP T + L+ +YVDD++I G I + + +SQ+F MKDLG+LS LG+EV +SQ Y ++L + G + V TP+E VK++ + EP ++T YR +VGSL+Y T T PD+AYA H ++ M P
Sbjct: 62 RQAMADELDALHKTHTW---DMTTLPPGKSAVGCKWVYKIKTRADGSVERYKARLVARGFTQEYGIDYEETFAPMDVKNAFLNGDLLEEVYMQPPPGYPDSQNQGFIPSSYDSALFIRHTSTGITLILLYVDDMIITGDDPAGIRDLQQFLSQQFEMKDLGTLSYFLGLEVTSSSDG--YYLSQAKYASDLLSKAGLTDSNTVSTPLELNVKLNSTDG-----EPLSDATLYRKLVGSLIYL-TVTHPDLAYAVHLVSQFMSAP 314
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A2U1PVD2_ARTAN (Zinc finger, CCHC-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PVD2_ARTAN) HSP 1 Score: 143 bits (360), Expect = 6.870e-35 Identity = 97/348 (27.87%), Postives = 159/348 (45.69%), Query Frame = 1
Query: 1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLP-------------------------PE--------------------------------TNLLVAVYVDDLVIAGR-HENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
+PK+ ++ ++ W+ A+++E ++++N TW D LP G K + KWIFK+ +K DG++ ++KARLV QGF Q G D+F+T A A+LN +EEE++ P P+ + +++ +YVDD++I G + +DE K +S +F MKD+G +LGI ++ + I I+Q YI ++LKR+ + EC V TP++ VK+ + + + EY +VGSLMYA T TRPDIAY Q ++ +P + +R+F
Sbjct: 674 DPKTFKHAMESRDVAFWKEAIDDEMSSILENNTWVLSD---LPPGSKPLGCKWIFKKNMKVDGTIDKFKARLVIQGFKQKPGIDYFDTYATVARISTIRLLIALSAIHDLIVHQMDVKTAFLNGDLEEEVYMNQPEGFVMPGNEHKVCKLVKSLYGLKQTPKQWHQKFDEVILSSGFSLNQSDKCIYSRFDSSCSGVIICLYVDDMLIFGTDQQQVDETKDLLSSKFSMKDMGEADVILGIRIK--RADKGIAITQSHYIEKMLKRFNYSECSPVSTPMDSSVKLMLNKGMGI------SQLEYSQVVGSLMYAMTSTRPDIAYDVGQLSKYTSNPGTQHWQAVQRVF 1010 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39107.10184.1 >prot_H-paniculata_contig39107.10184.1 ID=prot_H-paniculata_contig39107.10184.1|Name=mRNA_H-paniculata_contig39107.10184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILback to top mRNA from alignment at H-paniculata_contig39107:813..1954- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39107.10184.1 ID=mRNA_H-paniculata_contig39107.10184.1|Name=mRNA_H-paniculata_contig39107.10184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1142bp|location=Sequence derived from alignment at H-paniculata_contig39107:813..1954- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39107:813..1954- >mRNA_H-paniculata_contig39107.10184.1 ID=mRNA_H-paniculata_contig39107.10184.1|Name=mRNA_H-paniculata_contig39107.10184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig39107:813..1954- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |