mRNA_H-paniculata_contig39107.10184.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig39107.10184.1
Unique NamemRNA_H-paniculata_contig39107.10184.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 154 bits (388), Expect = 1.290e-38
Identity = 104/343 (30.32%), Postives = 157/343 (45.77%), Query Frame = 1
Query:    4 PKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLPP-----------------------------------------------------ETNLLVA-VYVDDLVIAGRHENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
            P+S  E     +  +W+AAM+ E   L  NGTW+    G LP GRKAI +KW+F  K  +DGS+ +YKARLVAQGFSQ+ G+D+F+T +                             AYL+ P+EEE++ +  P                                                     E  L +A V+VDD  + G    +D FK ++++ F +   G+LS  +G++V     NG I+I Q  Y+  +L+R+G  +C+ V TP++  VK+        P++       Y   +GSLMYA+TGTRPDIA+A    ++    P     +  K +F
Sbjct:  832 PRSVDECKTRDDWPQWKAAMDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYMRQAPGYDDGSGQVYVLIKALYGLKQAGRVWNHLLNHVLTSLMGWTRSEADPCLYFKHEGKLNMALVHVDDTALYGERSILDRFKADVAKHFAITTNGTLSSFVGLQVT--RKNGAISILQTRYLETILERFGMQDCKPVSTPLDPGVKLEPTPEDQTPAD-----VPYAAAIGSLMYAATGTRPDIAFAVQTLSQFTSRPSATHWTAVKHVF 1164          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A2P4Y5K5_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5K5_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.670e-38
Identity = 97/263 (36.88%), Postives = 147/263 (55.89%), Query Frame = 1
Query:    1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAYLN-APVEEELFFKLPPETNLLVAVYVDDLVIAGRH-ENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
            EPK   E + G      R A+  E  ++   G + +    +LP  ++A+ TKW+FK K   DGS+ +YKARLVA+GF Q  G D+ ET +  +N  P    L+ K+     +L+ VYVDD+++ G   E I E K  +  RF M D G  S +LGIEV  D  +G++T+SQ  YI+++L+R+G  +C+   +PV+  +K+   ++  K   P      +R  VG+L +  T TRP+IA+A    +R ME+P  E     KRIF
Sbjct:  600 EPKPFQEAVNGSGQAHRRKAIRAELKSMRLRGVFRA---AKLPNNQRAVGTKWVFKIKRNADGSIEKYKARLVAKGFVQKYGIDYTETLSPVVNYGPC---LYIKIVNSECVLLLVYVDDVLVTGNSAELIAEVKRQLKSRFEMTDSGKCSFILGIEV-VDNADGSVTLSQARYIKDILERFGMQDCKPTASPVDISMKLVSSDATTKLGAP------FREAVGALTHLMTSTRPNIAFAVGYVSRFMENPQVEHWIAVKRIF 849          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 151 bits (382), Expect = 8.200e-38
Identity = 108/345 (31.30%), Postives = 159/345 (46.09%), Query Frame = 1
Query:    4 PKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLPP------------------------ETN------------------------------LLVAVYVDDLVIAGRH-ENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKV--KISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRI 780
            P+S  E     E  +W+ AM+EE   + + GT+  ED   LPAGR  I  KW+F +K  EDG+++RYKARLVAQG+SQ+ G D+ ET A                             AYLN  +EEE++ + P                         E N                               ++ V+VDDL+I     E++ E K  +   F +KDLG   +++GIE++ D  NGTI++SQ  YI  VL R+G    R V TP++  V  K    +    P+   G    Y+ ++GSL+YA+ GTRPDI++A  +  +   +P  E  +  KR+
Sbjct:  879 PRSVAEAEASPEWAEWKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVILKKRTDDLVADPAMVGG----YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRV 1216          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A438IJY3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IJY3_VITVI)

HSP 1 Score: 150 bits (379), Expect = 2.000e-37
Identity = 95/273 (34.80%), Postives = 141/273 (51.65%), Query Frame = 1
Query:    1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAY-----------LNAPVEEELFFKLPPETNLLVAVYVDDLVIAGRHENI-DEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNST-EYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRI 780
            +P S  +  +  ++EKW  AM++E  ++  NG W+  +   LP G K I  KWIFK K    G++ RYKA LVA+GF+Q EG D+ ET +             L   V++ ++ K      +++ +YVDD+++A     +  E K  +S +F MKDLG+ S VLGI++  D   G + +SQ +YI +VL R+G   C    TPV    K S+ +      E        Y   +GSLMYA   TRPDIAY      R + +P  +     KR+
Sbjct:  747 DPISVSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVE---LPKGVKLIGCKWIFKIKRDSKGNIVRYKAHLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALENTVDQCIYLKFSGTKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILRLSQKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAIGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 1016          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: UPI000B76FC47 (uncharacterized protein LOC110661558 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76FC47)

HSP 1 Score: 149 bits (376), Expect = 4.890e-37
Identity = 99/248 (39.92%), Postives = 141/248 (56.85%), Query Frame = 1
Query:   43 EKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA--AYLNAPVEEELFFKLP------------PETNLLVAVYVDDLVIAGRHEN-IDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRME 741
            E+WRAAM +E  AL  NGTW  E+   L  G+K I  KW++K K   DGSV RYK RLV  G +QVEG DF + +   A+L+  +EEE+  K+P                L V +YVDDL+I+    + + +FK+ +S+ F MKDLG L   LGIEV  +  NG I + Q  Y+ +V+   G   C+   TP+E   K+++ ES D   +P     +YR +VG L+Y  T TRP+++Y  H  A+ M+
Sbjct:  505 ERWRAAMRKEIQALEDNGTWTVEN---LSFGKKTIGRKWVYKIKYNSDGSVKRYKTRLVILGNNQVEGIDFHQMDVQNAFLHGDLEEEVDIKIPLGFASQLPRKVSGTVQLNVLIYVDDLIISSNDVSAVQKFKNYLSRCFHMKDLGKLKFFLGIEVARNS-NG-IFLCQRKYVLDVISEVGLLGCKPAKTPLEQNHKLALTESEDM-DDP----AQYRRLVGRLIYL-TITRPELSYCVHILAQFMQ 741          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A699GM13_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699GM13_TANCI)

HSP 1 Score: 147 bits (372), Expect = 1.040e-36
Identity = 93/275 (33.82%), Postives = 150/275 (54.55%), Query Frame = 1
Query:    1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAYLNAPVEEELFFKLPPETNLLVAVY----------VDDLVIAGRHEN----IDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
            +P++  E ++ ++A  W+ A+E+E G++++N TW   D   LP G K +  KWIFKRK+K DG++ ++KA LV QGF Q EG D+F+T A          LF  +P   NL++             +D+ V   + +     +D+ K  +S RF MKD+G    +LGI+++ +  N  I I+Q  YI ++LK++   +C  V TP++   K+ +  +  KP +      EY   +G LMYA T TR DIAYA  + +R   +P ++      R+F
Sbjct:  329 DPRTYNEAMQSRDAAFWKEAIEDEIGSIMENNTWVLSD---LPRGYKPLGCKWIFKRKMKVDGTIDKFKAPLVVQGFRQTEGIDYFDTYAPVARITTIR-LFLAIPAIHNLVIHQMDVKTTFLNGDLDEKVYMKQPKGFFMPVDKTKKFLSSRFSMKDMGETDDILGIKIKRE--NKRIVITQSHYIEKILKKFNREDCSPVSTPMDPVEKLKL--NTGKPID----QLEYSKAIGCLMYAMTSTRLDIAYAVGRLSRFTSNPSRQLWKAITRVF 591          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A438GQ37_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GQ37_VITVI)

HSP 1 Score: 147 bits (371), Expect = 2.070e-36
Identity = 99/291 (34.02%), Postives = 141/291 (48.45%), Query Frame = 1
Query:    1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFET-----------------------------NAAYLNAPVEEELFFKLPPETNLLVAVYVDDLVIAGRHENI-DEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNG-NSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRI 780
            +P +  + +K   ++KW  AM EE+ ++  N  WE      LP G K I  KWIFK K   +G+V RYKARL+A+GF+Q EG DF ET                               A+LN  ++E ++        + + +YVDD+++A    +I  + K  +S+ F MKDLG  S VLGI++  D   G + +SQ +YI +VL+RYG    +   TPV    K S+ +      E        Y   VGSLMYA   TRPDIAY      R + +P        KR+
Sbjct:  397 DPINFQQAMKSSNSQKWIEAMNEEYKSMQDNKVWELVP---LPVGTKPIGCKWIFKTKRDSNGNVERYKARLIAKGFTQKEGIDFKETFSPVSTKDSFRIIMALVAHYDLELHQMDVKTAFLNGDIDETIYMW---SKYIFLVLYVDDILLATNDISILHDTKRFLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKPGDTPVAKGDKFSLNQCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMNHWRAAKRV 681          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A6L2P354_TANCI (Uncharacterized protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2P354_TANCI)

HSP 1 Score: 146 bits (369), Expect = 4.040e-36
Identity = 94/285 (32.98%), Postives = 150/285 (52.63%), Query Frame = 1
Query:   34 QEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLPPE-----TNLLVAVYVDDLVIAGRHEN-IDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
            +E+   + A+++E G+++KN TW   D   LP G K +  KWIFKRK+K DG++ ++KARL+ QGF Q EG  +F+T A                             A+LN  ++EE++ K P         +++ +YVD+++I    +N +DE K  +S RF MKD+G    +LGI+++ +  N  I I+Q  YI ++LK++   +C  V  P++   K+    +  KP +      EY   +G LMYA   TRPDIAYA  + +R   +P ++      R F
Sbjct:  663 EESRDQKEAIDDEIGSVMKNNTWVLSD---LPHGCKPLGCKWIFKRKMKVDGTIDKFKARLIIQGFRQKEGIGYFDTYALVARITTIRLLLALAAIHNLVIHQMDVKTAFLNGDLDEEVYMKQPKGFVMSGKRVIICLYVDNMLIFRTDQNQVDETKKFLSSRFLMKDMGKADVILGIKIKRE--NKGIVITQSHYIEKILKKFNREDCSPVSIPMDPVEKLKP--NTRKPID----QLEYSRAIGCLMYAMISTRPDIAYAVGRLSRFTSNPSRQHWKAIIRAF 936          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A2N9GMX8_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GMX8_FAGSY)

HSP 1 Score: 142 bits (359), Expect = 5.760e-36
Identity = 99/264 (37.50%), Postives = 140/264 (53.03%), Query Frame = 1
Query:   52 RAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA------AYLNAPVEEELFFKLPP------------------------ETNL-LVAVYVDDLVIAGRHE-NIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDP 747
            R AM +E  AL K  TW   D   LP G+ A+  KW++K K + DGSV RYKARLVA+GF+Q  G D+ ET A      A+LN  + EE++ + PP                         T + L+ +YVDD++I G     I + +  +SQ+F MKDLG+LS  LG+EV          +SQ  Y  ++L + G  +   V TP+E  VK++  +      EP  ++T YR +VGSL+Y  T T PD+AYA H  ++ M  P
Sbjct:   62 RQAMADELDALHKTHTW---DMTTLPPGKSAVGCKWVYKIKTRADGSVERYKARLVARGFTQEYGIDYEETFAPMDVKNAFLNGDLLEEVYMQPPPGYPDSQNQGFIPSSYDSALFIRHTSTGITLILLYVDDMIITGDDPAGIRDLQQFLSQQFEMKDLGTLSYFLGLEVTSSSDG--YYLSQAKYASDLLSKAGLTDSNTVSTPLELNVKLNSTDG-----EPLSDATLYRKLVGSLIYL-TVTHPDLAYAVHLVSQFMSAP 314          
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Match: A0A2U1PVD2_ARTAN (Zinc finger, CCHC-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PVD2_ARTAN)

HSP 1 Score: 143 bits (360), Expect = 6.870e-35
Identity = 97/348 (27.87%), Postives = 159/348 (45.69%), Query Frame = 1
Query:    1 EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAILTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNA-----------------------------AYLNAPVEEELFFKLP-------------------------PE--------------------------------TNLLVAVYVDDLVIAGR-HENIDEFKHNISQRFRMKDLGSLSRVLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISVPESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPCQEDLSTCKRIF 783
            +PK+    ++ ++   W+ A+++E  ++++N TW   D   LP G K +  KWIFK+ +K DG++ ++KARLV QGF Q  G D+F+T A                             A+LN  +EEE++   P                         P+                                + +++ +YVDD++I G   + +DE K  +S +F MKD+G    +LGI ++    +  I I+Q  YI ++LKR+ + EC  V TP++  VK+ + +          +  EY  +VGSLMYA T TRPDIAY   Q ++   +P  +     +R+F
Sbjct:  674 DPKTFKHAMESRDVAFWKEAIDDEMSSILENNTWVLSD---LPPGSKPLGCKWIFKKNMKVDGTIDKFKARLVIQGFKQKPGIDYFDTYATVARISTIRLLIALSAIHDLIVHQMDVKTAFLNGDLEEEVYMNQPEGFVMPGNEHKVCKLVKSLYGLKQTPKQWHQKFDEVILSSGFSLNQSDKCIYSRFDSSCSGVIICLYVDDMLIFGTDQQQVDETKDLLSSKFSMKDMGEADVILGIRIK--RADKGIAITQSHYIEKMLKRFNYSECSPVSTPMDSSVKLMLNKGMGI------SQLEYSQVVGSLMYAMTSTRPDIAYDVGQLSKYTSNPGTQHWQAVQRVF 1010          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39107.10184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q45W64_PHACR1.290e-3830.32Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A2P4Y5K5_9STRA1.670e-3836.88Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A284QR88_ARMOS8.200e-3831.30Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A438IJY3_VITVI2.000e-3734.80Retrovirus-related Pol polyprotein from transposon... [more]
UPI000B76FC474.890e-3739.92uncharacterized protein LOC110661558 n=1 Tax=Hevea... [more]
A0A699GM13_TANCI1.040e-3633.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A438GQ37_VITVI2.070e-3634.02Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2P354_TANCI4.040e-3632.98Uncharacterized protein n=1 Tax=Tanacetum cinerari... [more]
A0A2N9GMX8_FAGSY5.760e-3637.50Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2U1PVD2_ARTAN6.870e-3527.87Zinc finger, CCHC-type n=1 Tax=Artemisia annua Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig39107contigH-paniculata_contig39107:813..1954 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score153.3
Seed ortholog evalue1.6e-34
Seed eggNOG ortholog15368.BRADI2G01680.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3IKX9@38820,3M2IR@4447,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons4
Model size816
Cds size816
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig39107.10184.1prot_H-paniculata_contig39107.10184.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig39107 813..1954 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930199.2105906-CDS-H-paniculata_contig39107:812..9961622930199.2105906-CDS-H-paniculata_contig39107:812..996Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 813..996 -
1691481187.7617264-CDS-H-paniculata_contig39107:812..9961691481187.7617264-CDS-H-paniculata_contig39107:812..996Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 813..996 -
1622930200.107066-CDS-H-paniculata_contig39107:1059..13671622930200.107066-CDS-H-paniculata_contig39107:1059..1367Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 1060..1367 -
1691481187.7725258-CDS-H-paniculata_contig39107:1059..13671691481187.7725258-CDS-H-paniculata_contig39107:1059..1367Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 1060..1367 -
1622930200.1224654-CDS-H-paniculata_contig39107:1544..16031622930200.1224654-CDS-H-paniculata_contig39107:1544..1603Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 1545..1603 -
1691481187.784942-CDS-H-paniculata_contig39107:1544..16031691481187.784942-CDS-H-paniculata_contig39107:1544..1603Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 1545..1603 -
1622930200.1382587-CDS-H-paniculata_contig39107:1689..19541622930200.1382587-CDS-H-paniculata_contig39107:1689..1954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 1690..1954 -
1691481187.79987-CDS-H-paniculata_contig39107:1689..19541691481187.79987-CDS-H-paniculata_contig39107:1689..1954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig39107 1690..1954 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig39107.10184.1

>prot_H-paniculata_contig39107.10184.1 ID=prot_H-paniculata_contig39107.10184.1|Name=mRNA_H-paniculata_contig39107.10184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
EPKSAVETLKGQEAEKWRAAMEEEWGALVKNGTWESEDPGRLPAGRKAIL
TKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFFETNAAYLNAPVEEE
LFFKLPPETNLLVAVYVDDLVIAGRHENIDEFKHNISQRFRMKDLGSLSR
VLGIEVRCDPPNGTITISQGSYIREVLKRYGFYECRGVPTPVEGKVKISV
PESADKPSEPNGNSTEYRGMVGSLMYASTGTRPDIAYAAHQAARRMEDPC
QEDLSTCKRIFVISLLCLTSAL
back to top

mRNA from alignment at H-paniculata_contig39107:813..1954-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig39107.10184.1 ID=mRNA_H-paniculata_contig39107.10184.1|Name=mRNA_H-paniculata_contig39107.10184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1142bp|location=Sequence derived from alignment at H-paniculata_contig39107:813..1954- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCCGAAATCAGCGGTAGAAACATTAAAGGGTCAGGAGGCGGAAAAATG GCGTGCGGCAATGGAGGAAGAATGGGGGGCGTTGGTGAAAAATGGGACAT GGGAAAGCGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAGGCGATTCTT ACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACG CTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCCCAGGTGGAGGGTAAAG ATTTCTTTGAAACCAGTGCCCCGTAGCTCGTGTGTCGATGTTACGTACTG CTTTTAGCCTGGCCGAAGAACATGATTTTGAATTAGAAGGCATGGACATA GATGCCGCGTATTTGAACGCCCCGGTAGAAGAAGAGCTATTTTTTAAGCT ACCCCCCGAGGTTTCCCCTTTCTCCCGAGACATACTTTTTGTGCGCCGCC TGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAATAAC ACTCTTGACGATTTTCTTGTTGAGATAGTACTCGAACGTTCCATTACCGA CTCATGCCTGTATTTTTCCCGCGGCGAAGGGGGAGAGACAAACCTTCTGG TAGCCGTGTATGTTGATGACCTGGTCATTGCTGGTCGTCATGAGAACATA GACGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGG CTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGATGTGACCCCCCTAATG GTACCATAACCATCTCGCAGGGTAGCTATATCCGCGAGGTACTAAAAAGA TACGGTTTTTACGAGTGTCGAGGAGTACCCACCCCTGTAGAGGGAAAAGT GAAGATTTCGGTACCCGAGTCGGCCGACAAACCCTCCGAACCGAAGTCAC TTGGAGCTGTACTGTCGGACATAGGCGCAGGAGTACAAGAAAGCAGCAGA GGGAGAAGTGGCAATTCGACTGAATACAGAGGCATGGTAGGATCACTCAT GTACGCCTCGACGGGAACTAGACCTGATATAGCATACGCGGCACACCAAG CAGCACGTCGTATGGAAGACCCATGTCAAGAAGACTTGAGTACATGCAAG CGCATTTTCGTTATCTCATTACTGTGCCTGACTTCGGCATTA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig39107:813..1954-

>mRNA_H-paniculata_contig39107.10184.1 ID=mRNA_H-paniculata_contig39107.10184.1|Name=mRNA_H-paniculata_contig39107.10184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1632bp|location=Sequence derived from alignment at H-paniculata_contig39107:813..1954- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCCGAAATCAGCGGTAGAAACATTAAAGGGTCAGGAGGCGGAAAAATG
GCGTGCGGCAATGGAGGAAGAATGGGGGGCGTTGGTGAAAAATGGGACAT
GGGAAAGCGAAGACCCGGGGAGGTTACCCGCAGGGCGGAAGGCGATTCTT
ACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACG
CTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCCCAGGTGGAGGGTAAAG
ATTTCTTTGAAACCAGAGCCGAAATCAGCGGTAGAAACATTAAAGGGTCA
GGAGGCGGAAAAATGGCGTGCGGCAATGGAGGAAGAATGGGGGGCGTTGG
TGAAAAATGGGACATGGGAAAGCGAAGACCCGGGGAGGTTACCCGCAGGG
CGGAAGGCGATTCTTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGA
CGGCAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAGGTTTTTCCC
AGGTGGAGGGTAAAGATTTCTTTGAAACCAATGCCGCGTATTTGAACGCC
CCGGTAGAAGAAGAGCTATTTTTTAAGCTACCCCCCGAGATGCCGCGTAT
TTGAACGCCCCGGTAGAAGAAGAGCTATTTTTTAAGCTACCCCCCGAGAC
AAACCTTCTGGTAGCCGTGTATGTTGATGACCTGGTCATTGCTGGTCGTC
ATGAGAACATAGACGAGTTCAAGCATAACATAAGTCAGCGTTTTAGGATG
AAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGATGTGA
CCCCCCTAATGGTACCATAACCATCTCGCAGGGTAGCTATATCCGCGAGG
TACTAAAAAGATACGGTTTTTACGAGTGTCGAGGAGTACCCACCCCTGTA
GAGGGAAAAGTGAAGATTTCGGTACCCGAGTCGGCCGACAAACCCTCCGA
ACCGAAACAAACCTTCTGGTAGCCGTGTATGTTGATGACCTGGTCATTGC
TGGTCGTCATGAGAACATAGACGAGTTCAAGCATAACATAAGTCAGCGTT
TTAGGATGAAAGACTTGGGCTCTCTCTCGCGCGTGTTGGGAATAGAAGTA
CGATGTGACCCCCCTAATGGTACCATAACCATCTCGCAGGGTAGCTATAT
CCGCGAGGTACTAAAAAGATACGGTTTTTACGAGTGTCGAGGAGTACCCA
CCCCTGTAGAGGGAAAAGTGAAGATTTCGGTACCCGAGTCGGCCGACAAA
CCCTCCGAACCGAATGGCAATTCGACTGAATACAGAGGCATGGTAGGATC
ACTCATGTACGCCTCGACGGGAACTAGACCTGATATAGCATACGCGGCAC
ACCAAGCAGCACGTCGTATGGAAGACCCATGTCAAGAAGACTTGAGTACA
TGCAAGCGCATTTTCGTTATCTCATTACTGTGCCTGACTTCGGCATTATG
GCAATTCGACTGAATACAGAGGCATGGTAGGATCACTCATGTACGCCTCG
ACGGGAACTAGACCTGATATAGCATACGCGGCACACCAAGCAGCACGTCG
TATGGAAGACCCATGTCAAGAAGACTTGAGTACATGCAAGCGCATTTTCG
TTATCTCATTACTGTGCCTGACTTCGGCATTA
back to top