mRNA_H-paniculata_contig3905.10174.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A6H5KR22_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR22_9PHAE) HSP 1 Score: 221 bits (563), Expect = 4.000e-65 Identity = 103/130 (79.23%), Postives = 114/130 (87.69%), Query Frame = 2
Query: 452 RTPELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLVTEIRDQPPAALS 841
R ELDFGNFQD M+ETMETR AYGRFWFRFMNGES +DVYDRATAFWESVFRSMD++ G+R++NYVIITHGLMMRLILMRYF WKVE+FE VWNP NCETWVMERDERG +RLVTEI D+PPA +
Sbjct: 156 RLRELDFGNFQDSGTMQETMETRKAYGRFWFRFMNGESCSDVYDRATAFWESVFRSMDHS-PGTRFQNYVIITHGLMMRLILMRYFQWKVEFFERVWNPSNCETWVMERDERGSYRLVTEILDRPPAVTT 284
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: D7FJY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY3_ECTSI) HSP 1 Score: 203 bits (517), Expect = 5.200e-61 Identity = 94/119 (78.99%), Postives = 108/119 (90.76%), Query Frame = 2
Query: 452 RTPELDFGNFQDVDDMKETME-TRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLV 805
R ELDFGNFQD++ M+ETME TR+AYGRFWFRFMNGES +DVYDRATAFWESVFRSMD++ G+R++NYVIITHGLMMRLILMRYF WKVE+FE VWNP NCETW+MERDERG +RL+
Sbjct: 105 RLRELDFGNFQDLETMQETMEKTRSAYGRFWFRFMNGESCSDVYDRATAFWESVFRSMDHS-PGTRFQNYVIITHGLMMRLILMRYFQWKVEFFERVWNPSNCETWIMERDERGSYRLL 222
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A1X6NU39_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU39_PORUM) HSP 1 Score: 146 bits (369), Expect = 5.300e-38 Identity = 68/113 (60.18%), Postives = 82/113 (72.57%), Query Frame = 2
Query: 452 RTPELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGS----RYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMER 778
R E DFGN Q VD+MK+ M TR GRF+FRF NGESGADVYDR T+F SV+R+MD T RY N +I++HGL MR+I MR+ HW+VE EDVWNPDN +TWV+ER
Sbjct: 147 RLREQDFGNLQQVDEMKDLMATRKEVGRFFFRFPNGESGADVYDRVTSFLSSVYRTMDKTRAAPPHHRRYDNILIVSHGLTMRIICMRFLHWEVEQLEDVWNPDNGQTWVLER 259
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A7S4DTM1_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DTM1_9EUKA) HSP 1 Score: 146 bits (368), Expect = 2.090e-37 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 2
Query: 434 PLVIFHRTPELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGG-FRLVTEIR 817
P + R E DFGNFQD D MK +M R +GRF++RFMNGESGADVYDR ++F+ ++FR D+ ++ NY+I++HGL MRL LMRY W VE FE V NPDNCE WVME+ G + L ++IR
Sbjct: 156 PCIEEARLREQDFGNFQDPDQMKISMRDRADFGRFYYRFMNGESGADVYDRMSSFFSTLFRHTDSVQR-EKFDNYIIVSHGLTMRLFLMRYLKWSVEQFEQVHNPDNCEIWVMEKHSNNGRYELKSDIR 283
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A813DT91_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DT91_POLGL) HSP 1 Score: 142 bits (359), Expect = 4.310e-37 Identity = 64/116 (55.17%), Postives = 86/116 (74.14%), Query Frame = 2
Query: 461 ELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDER-GGFRLV 805
E +FGNFQD +++ M TR+A+GRFW+RF NGESGADVY R T F +++R MDN N ++ NYV++ HGL +RL+LMRYF W +E FE VWNP NC WV+ER++ G ++LV
Sbjct: 95 EQEFGNFQDPVQIQKDMHTRSAFGRFWYRFNNGESGADVYGRVTLFLGTLYRWMDNCNR-RKFDNYVVVAHGLTIRLLLMRYFRWSIEDFEKVWNPHNCALWVLEREQTCGEYQLV 209
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A7S1MER9_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MER9_ALECA) HSP 1 Score: 137 bits (344), Expect = 1.590e-36 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 2
Query: 467 DFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLV 805
DFGNFQD + M++ + R +GRF+FRF NGE+G DVYDR FW +++R MD + +N+V++THGL+MR+ M YF W V F+ VWNP+NCE WV+E++ G +RL
Sbjct: 1 DFGNFQDPEVMEKVYKERQKFGRFYFRFPNGEAGTDVYDRVCDFWSTLYRFMDYRPEDTNVQNFVLVTHGLLMRIFCMCYFRWTVLEFDQVWNPENCEIWVLEKERNGRYRLA 113
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A7S4B7M4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B7M4_CHRCT) HSP 1 Score: 141 bits (355), Expect = 7.150e-35 Identity = 62/126 (49.21%), Postives = 81/126 (64.29%), Query Frame = 2
Query: 452 RTPELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSR-YRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLVTEIRDQP 826
R E DFGNFQD M+E + R +GRF++RF NGE+G DVYDR FW +++ M+ + S NYV++THGL+MR+ M YF W V+ FE VWNP NCE WV+E+D GFR + R P
Sbjct: 213 RLREQDFGNFQDATSMEEVFQERQRFGRFYYRFPNGEAGTDVYDRVADFWSTLYAFMERPRSPSETIENYVLVTHGLLMRIFCMCYFRWTVKEFEQVWNPSNCEIWVLEKDGANGFRHMGRWRASP 338
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A8J5XAE2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAE2_DIALT) HSP 1 Score: 134 bits (338), Expect = 6.360e-33 Identity = 64/131 (48.85%), Postives = 85/131 (64.89%), Query Frame = 2
Query: 425 DFHPLVIFHRTP----ELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLV 805
DF P + R E +FGNFQDV+ ++ + R YGRFW+RF NGESGADV++RA F ++FR MD ++ R +Y+I+ HGL +RL+ MRY W+V FE VWNP NCETWV+ER G + L
Sbjct: 185 DFDPAKVATREEVLLREQEFGNFQDVELIRRSKAERRRYGRFWYRFQNGESGADVHNRAADFLSTLFRQMDLSS--KRAPHYIILAHGLFIRLLCMRYLGWQVAQFEQVWNPRNCETWVLERRPDGRYHLT 313
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: A0A7S4J7C4_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4J7C4_GUITH) HSP 1 Score: 134 bits (338), Expect = 8.750e-33 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 2
Query: 452 RTPELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLVTEIR 817
R E DFGN+QD+ M+++++ R YG FW+RF +GESG DV+DR + +W SVFR M RY NYVI+THG+ MRL M YF W VE F V NP NCE W + RD +RLV+ ++
Sbjct: 244 RLREQDFGNYQDLLHMQKSLQDRQTYGPFWYRFEHGESGGDVWDRISGWWASVFRDMARY----RYPNYVIVTHGITMRLFCMYYFKWSVEEFSQVRNPSNCEVWELRRDANFQYRLVSPVK 361
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Match: L1JP45_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JP45_GUITC) HSP 1 Score: 134 bits (338), Expect = 2.740e-32 Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 2
Query: 452 RTPELDFGNFQDVDDMKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRYRNYVIITHGLMMRLILMRYFHWKVEYFEDVWNPDNCETWVMERDERGGFRLVTEIR 817
R E DFGN+QD+ M+++++ R YG FW+RF +GESG DV+DR + +W SVFR M RY NYVI+THG+ MRL M YF W VE F V NP NCE W + RD +RLV+ ++
Sbjct: 225 RLREQDFGNYQDLLHMQKSLQDRQTYGPFWYRFEHGESGGDVWDRISGWWASVFRDMARY----RYPNYVIVTHGITMRLFCMYYFKWSVEEFSQVRNPSNCEVWELRRDANFQYRLVSPVK 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3905.10174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3905.10174.1 >prot_H-paniculata_contig3905.10174.1 ID=prot_H-paniculata_contig3905.10174.1|Name=mRNA_H-paniculata_contig3905.10174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp MKETMETRNAYGRFWFRFMNGESGADVYDRATAFWESVFRSMDNTNTGSRback to top mRNA from alignment at H-paniculata_contig3905:8432..14204- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3905.10174.1 ID=mRNA_H-paniculata_contig3905.10174.1|Name=mRNA_H-paniculata_contig3905.10174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5773bp|location=Sequence derived from alignment at H-paniculata_contig3905:8432..14204- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3905:8432..14204- >mRNA_H-paniculata_contig3905.10174.1 ID=mRNA_H-paniculata_contig3905.10174.1|Name=mRNA_H-paniculata_contig3905.10174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at H-paniculata_contig3905:8432..14204- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |