prot_H-paniculata_contig3904.10173.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3904.10173.1
Unique Nameprot_H-paniculata_contig3904.10173.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length190
Homology
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 8.750e-49
Identity = 98/193 (50.78%), Postives = 122/193 (63.21%), Query Frame = 0
Query:    1 CSNGIPGIQSKNICCMAACGQCGGSGCSR-AGGLSAAECCESGVQAVGVLCDDSGEAPCIIDGGICSNGMPGIQHKGICCVAACGQCGDSGCSN-AGGLSAAECCTKDIAAANMDCTDSGVAPCVIYAAGECDGGIPGIQNKDICCVAGCGQCGGSGCSS-AGGLSAAECCVKNIGAAGMVCSATGAAPCIVD 190
            CSNGIPGIQ+ N CC+A CG CGG GC+   GGL    CC+S ++  G LC  + EAPC++D  +CSNG+PGIQ    CC+A CG CG +GC+   GGL A  CC  +I      C+ +  APCV+     C  GIPGIQ  + CC+A CG CGG+GC+   GGL A  CC+  I   G +CSAT  APCIVD
Sbjct: 2756 CSNGIPGIQTGNACCLAECGTCGGRGCAEYGGGLGEDNCCQSEIEDFGELCSVTMEAPCVVDD-VCSNGIPGIQTGNACCLAECGGCGGTGCAQLGGGLGADNCCMSEIEDFGELCSVTMEAPCVVDDV--CSNGIPGIQTGNACCLAECGGCGGTGCAQLGGGLGADNCCMSEIEDFGELCSATMTAPCIVD 2945          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.570e-39
Identity = 92/231 (39.83%), Postives = 115/231 (49.78%), Query Frame = 0
Query:    1 CSNGIPGIQSKNICCMAACGQCGGSGCS-RAGGLSAAECCESGVQAVGVLCDDSGEAPCIIDG----------------GICSNGMPGIQHKGICCVAACGQCGDSGCSNAGGLSAAECCTKDIAAANMDCTDSGVAPCVIY-------------------------AAGECDGGIPGIQNKDICCVAGCGQCGGSGCSSAGGLSAAECCVKNIGAAGMVCSATGAAPCIV 189
            C  GI GIQ+ ++CC  +C  CGGSGCS R GG    ECC  GV+A G  C  +GEAPCI+                  G C  G+ G+Q   +CC  +CG CG  GCS+  G     CC  +I  AN+DC+ +G APC++                          AAG C+GGI G+Q  ++CC   CG CGG GCS   G     CC   I  A + CS TG APCIV
Sbjct:  332 CDGGIVGIQASDVCCSLSCESCGGSGCSGRDGGED--ECCGGGVRASGRDCSVTGEAPCIVTSPEPSTPAPTPAPTRAAGTCDGGIVGVQASDVCCALSCGSCGGDGCSDRDG-GEDNCCGVEIRTANLDCSVTGEAPCIVTSPEPSTXXXXXXXXXXXXXTPAPSRAAGTCEGGIVGVQASNVCCALSCGSCGGDGCSDRDG-GEDNCCGVEIRTANLDCSVTGEAPCIV 558          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.410e-37
Identity = 95/206 (46.12%), Postives = 114/206 (55.34%), Query Frame = 0
Query:    7 GIQSKNICCMAACGQCGGSGCS-RAGGLSAAECCESGVQAVGVLCDDSGEAPCIIDGG-----ICSNGMPGIQHKGICCVAACGQCGDSGCSNAGGLSAAECCTKDIAAANMDCTDSGVAPCVI---------------YAAGECDGGIPGIQNKDICCVAGCGQCGGSGCSS-AGGLSAAECCVKNIGAAGMVCSATGAAPCIVD 190
            GI     CC A C +CGGSGCS R  GL+ A+CC S + A G  C   G APC+++ G       S G  GI    +CC A CG CG SGC +  GL+A ECCT  IAAAN+ C   G APCV+                 +  CDG + G    D CC AGC +CGGSGCS   GGL+ A+CC  +I     +CS TGAAPCIVD
Sbjct:   23 GILKGIYCCSAGCEECGGSGCSDRGDGLTGADCCTSDILAAGKAC---GSAPCLLEEGSSPTPASSGGCDGILQGDVCCSAECGTCGGSGCGSRAGLTANECCTSTIAAANVPC---GSAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKG----DYCCSAGCVECGGSGCSDRGGGLTGADCCTSDIS---NLCSVTGAAPCIVD 215          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.590e-37
Identity = 83/209 (39.71%), Postives = 114/209 (54.55%), Query Frame = 0
Query:    1 CSNGIPGIQSKN--ICCMAACGQCGGSGCSRAG--GLSAAECCESGVQAVGVLCDDSGEAPCIID------GGICSNGMPGIQHKG--ICCVAACGQ-CGDSGCSNAGGLSAAECCTKDIAAANMDCTDSGVAPC----VIYAAGECDGGIPGIQNKD--ICCVAGCGQCGGSGCSSAGGLSAAECCVKNIGAAGMVCSATGAAPCIVD 190
            C+ GI G++S +  +CC   CG CGG GC+ A    L+A +CC + +   GV+C D+G APCI+         +C NG  G+Q     +CC   CG+ CG  GC    G+ A++CC   I  + + C D   APC    V  A   C  G PGI+N+D  +CC   C  CGGS C +  GL+ A+CC   I A   +CS  G+APC+VD
Sbjct:   25 CAGGISGVESTSLDVCCTLECGTCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPCTQVAVAVADSVCSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVD 233          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.190e-28
Identity = 64/126 (50.79%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    1 CSNGIPGIQSKNICCMAACGQCGGSGCSR-AGGLSAAECCESGVQAVGVLCDDSGEAPCIIDGGICSNGMPGIQHKGICCVAACGQCGDSGCSN-AGGLSAAECCTKDIAAANMDCTDSGVAPCVI 124
            CSNGIPGIQS N CC+A CG CGGSGC++  GGL    CC+S ++  G LC     APC++D  +CSNG+PGIQ    CC+A CG CG SGC+   GGL    CC  +I      C+    APCV+
Sbjct: 1576 CSNGIPGIQSGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDD-MCSNGIPGIQSGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVV 1700          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.640e-27
Identity = 68/149 (45.64%), Postives = 84/149 (56.38%), Query Frame = 0
Query:    3 NGIPGIQSKNI-CCMAACGQCGGSGCSRAG---GLSAAECCESGVQAVGVLCDDSGEAPCII---------DGGI----------CSNGMPGIQHKG-ICCVAACGQCGDSGCSNAGG---LSAAECCTKDIAAANMDCTDSGVAPCVI 124
            +G  GI    + CC   CGQCGG GCS AG   GL +  CC  GV+++GV CDD+ EAPCII         D GI          CSNG+ GI HKG +CC  ACGQCG +GC +AG    L    CC+  + A N+ C D+  APC+I
Sbjct:  575 DGTEGIDGNGVVCCPIGCGQCGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGSAPDTDDVDSGISEESADDTQTCSNGIEGIDHKGEVCCPLACGQCGGTGCGSAGSAFELDGESCCSSQVLAGNVYCEDTNAAPCII 723          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 1.050e-24
Identity = 65/136 (47.79%), Postives = 79/136 (58.09%), Query Frame = 0
Query:   69 MPGIQHKGICCVAACGQCGDSGCSNAGGLSAAECCTKDIAAANMDCTDSGVAPCVIYAAGE----------------CDGGIPGIQNKDICCVAGCGQCGGSGCSSAGGLSAAECCVKNIGAAGMVCSATGAAPCI 188
            + GIQ+K +CC  +CG CGD GCS A G  AA CCT ++  A ++C   G APCVI A+                  CDGGI GIQ K++CC A CG CGG GCS   G S A CC   + A+G +CS TG APCI
Sbjct:   66 ISGIQNKDVCCPVSCGMCGDEGCSTAPG-GAASCCTTNVLDAGIEC---GEAPCVIDASSSTTPAPATPAPTSEVPMCDGGIVGIQAKEVCCSASCGSCGGVGCSGRDGGSDA-CCGGGVTASGRLCSVTGEAPCI 196          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: A0A6H5JGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP9_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 5.220e-24
Identity = 60/134 (44.78%), Postives = 77/134 (57.46%), Query Frame = 0
Query:   65 CSNGMPGIQHKGI-CCVAACGQCGDSGCSNAG---GLSAAECCTKDIAAANMDCTDSGVAPCVIYAA--GECDGGIPGIQ-NKDICCVAGCGQCGGSGCSSAG---GLSAAECCVKNIGAAGMVCSATGAAPCI 188
            C++G+ GI   G+ CC   CGQC  +GC+N G   GL +  CC   +  A   C  +G APC+  +   GEC GGI GI  N  +CC   CGQCGG+GCSSAG   GL +  CC   + ++G  C  TG APCI
Sbjct:   48 CNDGIEGIDGNGVVCCPLECGQCAGTGCTNFGADFGLGSESCCGGGVKDAGNYCDVTGEAPCIYGSPPEGECSGGIEGIDGNGVVCCPLECGQCGGTGCSSAGAASGLGSESCCESGVDSSGRYCDVTGEAPCI 181          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 9.670e-24
Identity = 66/149 (44.30%), Postives = 85/149 (57.05%), Query Frame = 0
Query:   63 GICSNGMPGIQHKGI-CCVAACGQCGDSGCSNAG---GLSAAECCTKDIAAANMDCTDSGVAPCVIYAA---------------GECDGGIPGIQ-NKDICCVAGCGQCGGSGCSSAG---GLSAAECCVKNIGAAGMVCSATGAAPCI 188
            G CS+G+ GI   G+ CC   CGQC  SGCS AG   GL+++ CC   I ++   C D+GVAPC+  +A               G C+ GI GI  N  +CC  GCGQC GSGCS+AG   GL+++ CC   I ++G  C  TG APCI
Sbjct:  533 GTCSDGIEGIDGNGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPDADXXXXXXXXXXVGTCNDGIEGIDGNGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCI 681          
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 1.810e-23
Identity = 58/130 (44.62%), Postives = 74/130 (56.92%), Query Frame = 0
Query:   62 GGICSNGMPGIQHKGICCVAACGQCGDSGCSNAGGLSAAECCTKDIAAANMDCTDSGVAPCVIYAAGECDGGIP-GIQNKDICCVAGCGQCGGSGCSSAGGLSAAECCVKNIGAAGMVCSATGAAPCIVD 190
            G  CSNG+ G++  G+CC   CG CG +GC +  GL+  +CCT  I   N  C+ +  APCVI    E D     G+   DICC AGCG CGG+GC+  GGLS  ECC   I AA   C    +APC++ 
Sbjct:   21 GTTCSNGLSGLEKGGVCCPVECGTCGGTGCGSRPGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDEETEADPTCSNGVAKGDICCSAGCGYCGGTGCAGRGGLSGDECCTSKIAAANKSCD-DQSAPCVMS 149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3904.10173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ68_ECTSI8.750e-4950.78WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3U7_ECTSI1.570e-3939.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWE8_ECTSI1.410e-3746.12Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LG71_ECTSI5.590e-3739.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JG29_9PHAE1.190e-2850.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS5_9PHAE1.640e-2745.64MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JWJ0_9PHAE1.050e-2447.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGP9_9PHAE5.220e-2444.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8H5_9PHAE9.670e-2444.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNF5_9PHAE1.810e-2344.62MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3904contigH-paniculata_contig3904:660..3063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3904.10173.1mRNA_H-paniculata_contig3904.10173.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3904 660..3063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3904.10173.1 ID=prot_H-paniculata_contig3904.10173.1|Name=mRNA_H-paniculata_contig3904.10173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
CSNGIPGIQSKNICCMAACGQCGGSGCSRAGGLSAAECCESGVQAVGVLC
DDSGEAPCIIDGGICSNGMPGIQHKGICCVAACGQCGDSGCSNAGGLSAA
ECCTKDIAAANMDCTDSGVAPCVIYAAGECDGGIPGIQNKDICCVAGCGQ
CGGSGCSSAGGLSAAECCVKNIGAAGMVCSATGAAPCIVD
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