prot_H-paniculata_contig390.10167.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig390.10167.1
Unique Nameprot_H-paniculata_contig390.10167.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length289
Homology
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 3.240e-71
Identity = 106/119 (89.08%), Postives = 113/119 (94.96%), Query Frame = 0
Query:   10 RPLSRLPSSSTIRRMANQGLQDLYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTLHLYSALLT 128
            R L+RLPSSST RRMANQGLQDLYDWLGG+NW+C DGWLDPGSDVREW+GLTITTSGDL+SINLISN+LEGEMPESLCNLY LQHLNLSYN+GLRGWIPEGLGDL  LKTLHLYSALLT
Sbjct:   21 RTLARLPSSSTQRRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLEGEMPESLCNLYSLQHLNLSYNFGLRGWIPEGLGDLIKLKTLHLYSALLT 139          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A4Z1SX23_GIAMU (Leucine-rich repeat protein n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1SX23_GIAMU)

HSP 1 Score: 72.0 bits (175), Expect = 1.960e-10
Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:   29 LQDLYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTLHLYSALLT 128
            LQ LY   GG  W  SDGW+DP ++   ++G++   + ++++I LI NNLEG +P  L + + L HL+LS+N  L G +P+    LT +   H+ S  LT
Sbjct:   23 LQALYADTGGVGWYNSDGWVDPAANPCVYFGISCNDAEEIVTIELIGNNLEGVIPSCLTDFHALTHLSLSHNR-LDGPLPDLPSSLTYI---HVGSNRLT 118          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A2P6P0S3_9EUKA (Ookinete protein n=2 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6P0S3_9EUKA)

HSP 1 Score: 68.2 bits (165), Expect = 4.190e-9
Identity = 39/99 (39.39%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   27 QGLQDLYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCN-LYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTLHLYS 124
            Q L DLY    G++W    GW  P  DV ++YG+T  + G ++S+ L  N LEG +PE     L  L+ L L+ N GL G +P  L  L +L  L L S
Sbjct:   26 QELIDLYKSTNGDDWYEHTGWDAPDGDVCDFYGVTCDSMGQVVSLVLRDNRLEGTLPEGFGQRLLSLETLILTGNEGLSGSLPRSLNKLVHLDLLDLSS 124          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A6L8DNI5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L8DNI5_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 8.220e-8
Identity = 32/83 (38.55%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   32 LYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDL 114
            LY+  GG  W  S  WL   + + +WYG+T   +G + ++ L+ NN+EG +P +L +L  L  LNL+ N GL G +P  L +L
Sbjct:  576 LYEAAGGMAWLGSGNWLTD-APLGDWYGVTTNAAGQVSTLVLVDNNMEGSLPPALGDLTGLTMLNLNGNDGLEGPLPRALVNL 657          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A6A6LKQ5_HEVBR (Protein kinase domain-containing protein n=3 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LKQ5_HEVBR)

HSP 1 Score: 62.8 bits (151), Expect = 2.400e-7
Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 0
Query:   46 GWL-DPGSDVREWYGLTITTSG----DLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTL 120
            GW  DP   +  W GL    +G     +IS+NL S+ L GE+  SL NL  LQHL+LS N  LRG +PE L +L NL+TL
Sbjct:  417 GWQGDPCMPLPSWDGLNCNDNGYYPPRIISLNLSSSGLTGEIDRSLSNLKLLQHLDLSEN-SLRGGVPEFLSELPNLRTL 495          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A6N9AKJ3_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N9AKJ3_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 2.610e-7
Identity = 39/98 (39.80%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   24 MANQGLQDLYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPE---GLGDLTNLK 118
            M    L  LY+   G NW     WL   + +  W+G+TI   G + S++L  NNLEG +P  L +L  L  L+LS N  L G +P    GLG LT LK
Sbjct:  379 MERSALIALYNAADGGNWTGRQNWLT-AAPLSAWHGVTINDQGQVTSLDLADNNLEGTLPSRLSDLRSLSILDLSNNSSLSGPLPASLVGLG-LTVLK 474          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: UPI001FCCA9B5 (hypothetical protein n=1 Tax=Porphyromonas somerae TaxID=322095 RepID=UPI001FCCA9B5)

HSP 1 Score: 62.0 bits (149), Expect = 3.140e-7
Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
Query:   32 LYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGD---LISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTLHL 122
            LY  LGG+ W   + W +    +  W G+++        ++S+NL  NNL+G +   +  L  ++H++LSYN GL G +P+ +  L NL TL L
Sbjct:   53 LYKELGGDKWYRRENW-NSDKPLDMWEGISVENIDGRKRIVSLNLSRNNLQGSLSPIIGKLLEIKHIDLSYNEGLTGNLPQEIYGLVNLTTLRL 145          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A2K1IJQ2_PHYPA (Protein kinase domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IJQ2_PHYPA)

HSP 1 Score: 60.8 bits (146), Expect = 1.060e-6
Identity = 35/88 (39.77%), Postives = 50/88 (56.82%), Query Frame = 0
Query:   35 WLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTLHL 122
            W GG     +D W+ P   V  W G+ I     +IS+ L+S +L G +P  +  L  LQ+L++S+N  LRG +P+ LG LTNL  L L
Sbjct:   47 WGGG-----TDMWVGPDPCVDRWEGV-ICKGNRVISLYLVSRDLNGIIPPEIGGLSALQNLDISFNDNLRGALPDELGSLTNLFYLSL 128          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A1E7FEP7_9STRA (L domain-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEP7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.280e-6
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0
Query:   29 LQDLYDWLGGENWRCSDGWLDPGSDVREWYGLTITTS----------GDLISINLISNNLEGEMPESLCNLYCLQHLNLSYNYGLRGWIPEGLGDLTNLKTLHL 122
            L DLY   GG +W  S  W+  G+D+  W G++   S          G +  INL  NNL G +P S+ NL  L+ LN+  N  L   +  GL     LK L L
Sbjct:    2 LSDLYTATGGLDWNDSTNWVQQGTDICNWKGISCYQSDGYSGDTRRDGQIKEINLSHNNLGGTLPPSIFNLPYLESLNVEDNPDLHVDLSGGLSKAQFLKFLTL 105          
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Match: A0A378JLE2_9GAMM (Leucine Rich repeats (2 copies) n=2 Tax=Legionella TaxID=445 RepID=A0A378JLE2_9GAMM)

HSP 1 Score: 59.7 bits (143), Expect = 1.340e-6
Identity = 29/72 (40.28%), Postives = 37/72 (51.39%), Query Frame = 0
Query:   29 LQDLYDWLGGENWRCSDGWLDPGSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYN 100
            L+  Y    G NW   D WL       +W G+       +I I L  NNLEG +P+SLCNL  L+ L LS+N
Sbjct:   53 LEKFYYATKGTNWIRQDNWLSEKISYCQWQGIICNEHEQVIEIQLYDNNLEGNLPDSLCNLTELKTLYLSFN 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig390.10167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ86_ECTSI3.240e-7189.08Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
A0A4Z1SX23_GIAMU1.960e-1039.00Leucine-rich repeat protein n=1 Tax=Giardia muris ... [more]
A0A2P6P0S3_9EUKA4.190e-939.39Ookinete protein n=2 Tax=Planoprotostelium fungivo... [more]
A0A6L8DNI5_9BACT8.220e-838.55Uncharacterized protein (Fragment) n=1 Tax=Gemmati... [more]
A0A6A6LKQ5_HEVBR2.400e-747.50Protein kinase domain-containing protein n=3 Tax=H... [more]
A0A6N9AKJ3_9BACT2.610e-739.80Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
UPI001FCCA9B53.140e-734.04hypothetical protein n=1 Tax=Porphyromonas somerae... [more]
A0A2K1IJQ2_PHYPA1.060e-639.77Protein kinase domain-containing protein n=3 Tax=P... [more]
A0A1E7FEP7_9STRA1.280e-635.58L domain-like protein n=1 Tax=Fragilariopsis cylin... [more]
A0A378JLE2_9GAMM1.340e-640.28Leucine Rich repeats (2 copies) n=2 Tax=Legionella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 115..175
e-value: 7.7E-7
score: 28.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 27..141
e-value: 5.3E-21
score: 76.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 142..247
e-value: 1.7E-22
score: 81.7
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 67..162
NoneNo IPR availablePANTHERPTHR27008:SF206coord: 67..162
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 111..217
NoneNo IPR availablePANTHERPTHR27008:SF206coord: 111..217
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 58..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig390contigH-paniculata_contig390:15963..36660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig390.10167.1mRNA_H-paniculata_contig390.10167.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig390 15683..37390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig390.10167.1 ID=prot_H-paniculata_contig390.10167.1|Name=mRNA_H-paniculata_contig390.10167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
MADSNSAAARPLSRLPSSSTIRRMANQGLQDLYDWLGGENWRCSDGWLDP
GSDVREWYGLTITTSGDLISINLISNNLEGEMPESLCNLYCLQHLNLSYN
YGLRGWIPEGLGDLTNLKTLHLYSALLTGAIPESLGQLLNLEELFLHGNR
LTGEIPPSLGNLRCLRKLFLNANDLIGPIPTELGRLTALDTLDVSYNNLR
GEVPAGVRALKNLQMLSTEGNANLMQPPTWGATAHLYGAGNGMMHGVVSS
GFETHGSNTTWDDADAEEAMELHTANHLESSSQSAPLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf