mRNA_H-paniculata_contig39.10165.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: D7FIM9_ECTSI (YL1_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM9_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.990e-83 Identity = 207/356 (58.15%), Postives = 242/356 (67.98%), Query Frame = 2
Query: 65 MSLA--ERKKAKALEEAIPALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXX-TVLRKNERAAKRKRPTGGIYKEPKRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKK-LKGQFTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKSHKALASRWMSRRGCLDSILFPSA--LPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRRFGPSVSER 1114
MSLA +R+KAKALEEA AL+VKL RSTRGQRIS+LQG+DAEADE FWG G W+EEE DS+FSSEEDEPDKF XXXXXXXX LRKNERAAKRK+P GG+YKEPK F VKK+ T PAG G + +R+VRASTK KTEKS + REGEAK ARE LKR+ Q KK +KGQFTQ+QLLLEA+QTEQENMRWILKQ+RLEDEAKEDEGRPK HK LASR+ SRRGC+D+I FP A LP VL Q P A G D D + + + + + C+++G PA YRDPLTG YA+ AAF+E+R+R+G S R
Sbjct: 1 MSLAAEKRRKAKALEEAGAALSVKLVARSTRGQRISELQGDDAEADETFWGQGAWQEEEDGDSEFSSEEDEPDKFDKDFNDSESEXXXXXXXXXNRLRKNERAAKRKQP-GGVYKEPKTFA-VKKRKTAPAG-----GXXXXXXXXXXXXXXAAPGALSKRTVRASTKNKTEKSLEVREGEAK-AREAQLKRSTPQRKKAIKGQFTQKQLLLEAIQTEQENMRWILKQRRLEDEAKEDEGRPKQHKILASRYASRRGCVDTIFFPDAYYLPPVLCQAPFSAGG-GDGADQDKGSKTAKSSSD-------------RRCKITGAPAPYRDPLTGYYYANGAAFREVRKRYGASARRR 334
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: A0A7R9YAX8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAX8_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.620e-17 Identity = 109/333 (32.73%), Postives = 156/333 (46.85%), Query Frame = 2
Query: 113 PALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRK-RPTGGIYKEPKRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQFTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKSHKALASRWMSRRGC-LDSIL-FP--SALPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRRFG 1096
P +A + R+T G+R++ L GE E D F+G W+E+ A+DS++S+E ++ DKF ER AKR+ RP + K T V+ K P + + + AA VP RS+R STKTKT +S +E++ E K+ R+ + P K Q +QE+LLLEA QTE+EN +W+ QQR E + ++ K R +SR+ +D I+ FP P + DSS D + + +A C V+G PAKY DPLT PYA AFKE+RRR G
Sbjct: 4 PTVAQQRESRATAGRRLTALVGEAKEEDAEFYGSSVWQED-ADDSEYSTEPEQRDKFDSDFDASEDSSDDE-----AAADREREAKRQSRPKRKVPK-----TVVRPKVARPKPRSDLKRAAPAAP------------VPSSRSLRHSTKTKTLESAQEQKKELKRLRDAR----RRLPVKAVLQLSQEELLLEACQTEEENYKWLQVQQRKAREREVNQQVIKKQVLFQERRLSRKQAGMDLIITFPMNEHFPKIF---------DSSIQDDERQRMAAPRA-----------------CAVTGLPAKYLDPLTHQPYATLEAFKEIRRRAG 283
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: A0A836CH45_9STRA (YL1_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH45_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 8.620e-14 Identity = 127/391 (32.48%), Postives = 177/391 (45.27%), Query Frame = 2
Query: 74 AERKKAKALEEAIPALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAE-----------DSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLR----KNERAAKRKRPTGGIYKEPKRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQF--TQEQLLLEAV-QTEQENMRWIL------------------------------KQQRLEDEAKEDEGRPKSHKALASRWMSRRGCLDSILFPSA--LPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRRFG 1096
A ++K + LEEA A + ++L GEDA+AD+ FWG WKE+E+E DSDF+ E+ XXXXXXXXXXXXXX + +R +N+ G VG G A + G Y P +RS+R +TKTKTE S K RE ++A+ K + QP+ F TQEQ+LLEA +TE N W+ +Q+ EA++ E +P+ H SR+ S+RG ++ FP+ +P+VL GP A P+ ++ +C+V+GRPAKYRD LTG P+ADAAAF+ELRRR+G
Sbjct: 3 ALKRKQRELEEATAA-------------QSAELIGEDADADQEFWGQDAWKEDESEYSTEAEEQDVFDSDFNESEESGXXXXXXXXXXXXXXXXXVEVYSEVRGQGSQNKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEDVGAGDVTA--MDDLG----GYAP-ERSMRTTTKTKTEVSAKVREQGLRQAQR---KGAEQQPQAAARAFRLTQEQMLLEAASETEHANTNWVAXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAQQRXXXXEAQDLETQPRQHMPFISRFYSKRGAPCTVTFPAVDLVPSVLK-----------GPHP--------------APITPQQRAQRTLCKVTGRPAKYRDSLTGYPFADAAAFRELRRRYG 345
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: A0A4D9D960_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D960_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.260e-11 Identity = 91/273 (33.33%), Postives = 132/273 (48.35%), Query Frame = 2
Query: 116 ALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAE-------------DSDFS--SEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRKRPTGGIYKEPKRFTGVKKKAT---PPAGENGVGGGSGAAEQ--LSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQFTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKSHKALASRWMSRRGCLDSILFPSA--LPAVL 868
+LA R T G+R+ ++ GE+ + DE FW WK ++AE DSDFS +EDE + XXXXXX N R+ Y+EPKR K +T P E + E+ +R RE+ P+ R+ RA+T+ EK+ +E A+K +EE + T P+ K F+QE+LL EA QTEQEN RW+L ++RL++E PK L +R++SRRG + FP +P +L
Sbjct: 77 SLAFGREKRVTMGKRMGNMVGEELDKDETFWEDSKWKVDDAESEYSNASESGDEVDSDFSVSGDEDEGEDDREQGEEAERAVAXXXXXXXXXXANARSK---------YREPKRKLRPVKDSTFGLAPRPEMSAEEVARMKERRTAARLRREAALMAPVDRAKRATTQ---EKTVATQEALARKGQEEAKRTTARAPRATKCIFSQEELLREACQTEQENARWLLGRRRLQNETDATSHAPKRQVKLKARFVSRRGGYRVVNFPEVDLMPGIL 337
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: A0A7S0T110_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T110_9CHLO) HSP 1 Score: 76.3 bits (186), Expect = 9.570e-11 Identity = 108/344 (31.40%), Postives = 150/344 (43.60%), Query Frame = 2
Query: 140 RSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRKRPTGGIYKEPKRFTGVKKKATP--PAG----ENGVGGGSGAAEQLSRAGRESQDYVP-------------------IQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQFTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKSHKALASRWMSRRGCLDS--ILFPSALPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRR 1090
R+TRG R+S L ++ ADE FWG + EE ++D+ + SE ++ D XXXXX A +R+RPT K P+R + K T PAG GVG G GA SR + + P +++S R+ K KS RE A+KA+ + T P K TQ ++L EA TE N+ + + R+E+ K+ R K+H A + G + + + F + LP L K +A AR C V+G+PAKYRDPLTG PY DA+AFKELRRR
Sbjct: 17 RATRGLRMSKLLEDEDSADEDFWGQDAFAEE-SDDNQYESESEKEDVIDSDFNDEXXXXXDDEVHV--------AKERRRPT---LKAPERKSAPKPSGTAGGPAGGARGAEGVGDGGGADVNFSRGAKSTPHQTPPGLVPGDGDGSHAAAMDGGLRKSSRSIVKEIRSKSEMARE--ARKAKPAPRRHVPTDPVKA---LTQAEILAEAATTEVRNLADLERMLRMEEATKKKAERVKTHFNGAVIRIKSSGPVTTMELRFGARLPPPLGAKAPKATP--------------------AAR-----------CVVTGKPAKYRDPLTGQPYLDASAFKELRRR 312
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: I1I091_BRADI (YL1_C domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1I091_BRADI) HSP 1 Score: 73.9 bits (180), Expect = 3.180e-10 Identity = 103/342 (30.12%), Postives = 150/342 (43.86%), Query Frame = 2
Query: 101 EEAIPALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRKRPT--GGIYKEPKRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQ---FTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKS-HKALASRWMSRRG-----CLDSILFPSALPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRRF 1093
+E P + + R+TRG+RI+ L E+ E DE+FWG KE+E ED ++ E+D D+F XXXX + ER +KR G K+ K KK E + SG A R+ ++ D +++VR ST+T S R+ E + R E K K+ +G+ TQE++LLEA +TE NMR + + E+E K+ K+ + R+ SR G ++ F S L + P +K VC ++G PAKYRDP TG PYA AAFK +R R+
Sbjct: 3 DEEEPPVLLDRAARTTRGKRITKLVEEEVEQDEVFWGQEALKEDE-EDDNYQEEQDAGDEFDSDFGEDEPEPDXXXXREA---REERLPIKKRLVFPGKTMKKMKASKKKKKVVIKLEDEGVIDNDSGKATASKRS--DAPDEWESEKTVRKSTRT----SVIVRQAEREAIRAEKQATAKPVKKRKEGEEKRMTQEEMLLEAAETEIMNMRNLERVLAREEEVKKKAVVQKAVYGGPTVRFYSRDGESHLEFVNGASFGSELCTTSTPYP-----------------------------------EKSVCAITGLPAKYRDPKTGLPYATMAAFKTIRERY 299
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: B7FUQ2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUQ2_PHATC) HSP 1 Score: 72.8 bits (177), Expect = 1.900e-9 Identity = 62/159 (38.99%), Postives = 88/159 (55.35%), Query Frame = 2
Query: 635 KTQPKKLKGQFTQEQLLLEA-VQTEQENMRWILKQQRLEDEAKEDEG-RPKSHKA---LASRWMSRRGCLDSILFPSA--LPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRR 1090
K QPK FTQE+LLLEA ++TE EN RW+L +QR++D+ D G +SH+ + ++SRRG ++I FP +P +L+Q +++ E+ R P C V+G AKY+DPLTG Y++AAAFKELRRR
Sbjct: 214 KRQPK---HNFTQEELLLEAALETEPENHRWLLSRQRIQDQQDRDAGPNDRSHRRGGRVIESYVSRRGAPNTITFPEMDYVPEILTQS---------------SSAMLERL-----RIPT-------FCVVTGERAKYKDPLTGLEYSNAAAFKELRRR 342
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: B9S1X2_RICCO (DNA binding protein, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9S1X2_RICCO) HSP 1 Score: 70.5 bits (171), Expect = 4.120e-9 Identity = 103/326 (31.60%), Postives = 148/326 (45.40%), Query Frame = 2
Query: 140 RSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRKRPTGGIYKEPKRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQFTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKSHKALAS----RWMSRRGC----LDSILFPSALPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRRF 1093
R TRG+R++ L E+ E DE+FW KEEE D+++ +E++ D+F XXXXXXXXXX RK + KR G + K V K P+ + S A E R+ D V +R VR ST+T ER+ + A + +K K + + + + TQE++LLEA QTE N+R + + E+E K+ R HKA+ + R+ S+ GC + F S + P +A VC ++G PAKYRDP TG YA AFK +R+RF
Sbjct: 19 RQTRGKRMNKLLDEEIEEDELFWSQDALKEEEN-DNNYEAEQEVADEFDSDXXXXXXXXXXEAEDVPSERKQTK--KRLIYPGKPSTKKKXXXKVLSKLDRPSKDEKTAEESSAPEH-----RDVSDDVEGERIVRKSTRTSVIVKQAERDA-IRAALQATMKPIKRKKEGEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKK---RAIVHKAVYNGPQIRYFSKDGCSYLEFKGVSFRSEISVASVPYPEKA-----------------------------------VCAITGLPAKYRDPKTGLAYATKEAFKIIRKRF 297
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: A0A834X0W8_9FABA (SWR1 complex subunit 2 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X0W8_9FABA) HSP 1 Score: 70.1 bits (170), Expect = 5.460e-9 Identity = 112/329 (34.04%), Postives = 156/329 (47.42%), Query Frame = 2
Query: 140 RSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRKRPTGGIYKEPKRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTEKSFKEREGEAKKAREELLKRTKTQPKKLKGQ---FTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPKSHKALAS----RWMSRRGCL-----DSILFPSALPAVLSQKPARADSDSSGPDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELRRR 1090
R+TRG+R++ L E+ E DE+FW KEEE +D+ + E + D+FXXXXXXXXXXXXXXXX V ER K+KR + KR +KK T E+ A + + ++ D +R +R ST+T S R+ E R L TK +K +G+ TQE++LLEA QTE N+R + + E+E K R HKA+ + R++S+ GC + F S + P +K VC ++G PAKYRDPLTG PYA AFK +R+R
Sbjct: 18 RATRGKRMTRLLDEEIEEDELFWNQEALKEEENDDN-YEEEPEVADEFXXXXXXXXXXXXXXXXNDAV----ERIPKKKR----LIFPGKRLPKKRKKKTLSKLEDAPEDDKEAEQSNAEEHHDAPDDAG-ERMIRKSTRT----SVIVRQAERDAIRAALQATTKPIKRKKEGEEKRMTQEEMLLEAAQTEIMNLRNLERVLAREEEVKR---RAIVHKAVYNGPQIRYISKDGCTFLEFSKGLSFQSEISTTSVPYP-----------------------------------EKSVCAITGLPAKYRDPLTGLPYATLEAFKIIRQR 294
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Match: A0A2H6KFN8_9APIC (YL1 nuclear C-terminal domain-containing protein n=1 Tax=Babesia ovata TaxID=189622 RepID=A0A2H6KFN8_9APIC) HSP 1 Score: 70.5 bits (171), Expect = 5.610e-9 Identity = 99/344 (28.78%), Postives = 151/344 (43.90%), Query Frame = 2
Query: 95 ALEEAIPALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHGTWKEEEAEDSDFSSEEDEPDKFXXXXXXXXXXXXXXXXXXTVLRKNERAAKRKRPTGGIYKEP--KRFTGVKKKATPPAGENGVGGGSGAAEQLSRAGRESQDYVPIQRSVRASTKTKTE--KSFKEREGEAKKAREELLKRTKTQPKKLKGQFTQEQLLLEAVQTEQENMRWILKQQRLEDEAKEDEGRPK-SHKALASRWMSRRGCLDSIL-------FPSALPAVLSQKPARADSDSSG--PDTDGAASSGEKAGEGGARSPPRGGKKKHVCEVSGRPAKYRDPLTGSPYADAAAFKELR 1084
+ +E +A++L R RG++ + L GE+ E D+ FWGH TW EEEA D D++ E E +++ V + K++R G Y +P +R V+K E G G + S+ E + RSVRASTK KTE + G +K A + K PKK + TQEQL+ A++TE N R + Q EDE K E K ++K W+ L + P +++KP + +SG P+ K R K+ +C ++G+PA+Y DPLTG Y++ A+ +R
Sbjct: 53 SFDEMSVGVALELPKRQNRGKKYTQLVGEELEKDQQFWGHNTW-EEEAVDEDYNCSEGE-EQYAYSTDSDFDDPETDKSDEEVDESQFKEKKKRR--YGSYVDPALQRNKLVRKTIDKQNTEKSRGDEGGRTRRQSQQAPE----PGVSRSVRASTKWKTEITNEMERIRGSSKPAGGAAAQ--KKAPKK-RSSMTQEQLMANALKTEAANARSLANLQAWEDEKKYYEDIKKWNYKGSYDIWVCWNSLLSIVTKNETEQEVQPTPPTHVTEKPLKLYMFTSGKLPEFYNEQEKARKR---------RDSAKQPLCAITGKPARYVDPLTGHYYSNEDAYNAIR 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig39.10165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig39.10165.1 >prot_H-paniculata_contig39.10165.1 ID=prot_H-paniculata_contig39.10165.1|Name=mRNA_H-paniculata_contig39.10165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=722bp MSLAERKKAKALEEAIPALAVKLNGRSTRGQRISDLQGEDAEADEMFWGHback to top mRNA from alignment at H-paniculata_contig39:58282..65936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig39.10165.1 ID=mRNA_H-paniculata_contig39.10165.1|Name=mRNA_H-paniculata_contig39.10165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7655bp|location=Sequence derived from alignment at H-paniculata_contig39:58282..65936+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig39:58282..65936+ >mRNA_H-paniculata_contig39.10165.1 ID=mRNA_H-paniculata_contig39.10165.1|Name=mRNA_H-paniculata_contig39.10165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4332bp|location=Sequence derived from alignment at H-paniculata_contig39:58282..65936+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |