mRNA_H-paniculata_contig3898.10158.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A6H5KD78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD78_9PHAE) HSP 1 Score: 444 bits (1141), Expect = 2.090e-130 Identity = 268/532 (50.38%), Postives = 319/532 (59.96%), Query Frame = 1
Query: 103 LARRDLAKRALGSGFEAVAAVRAHDVQ-WPGRGGDNASGNMGQGGEQGQ---RQRQSKIGPGSGTL-PVQFTGFTWDGVTVVMKEVVPGCARVAQPV-TPNFVDVQKMKDLQSWESTWVGYYGDRGSVPEEEE--------------------------QNGSGVDDVDVDSGG------KRPCLVVEAMVVPSKDIVVDIIVPVSSGLVPRLSTLMPQMERLALGAACTPLPDSNILAPKCNDPEYYSPAFWPEKLTRKGRRASS-SFS---------SPAGNGGSWSQGDHGANNRSRVATEASPRLRGRGKGGG------IGNGDDFRVIVVTDDPAVEALLTKYNVDAVYVATRAPFSKARAIQDASQVIPDDHILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGARGKCLYPISTFGPMAMYKSDFVAVGGIEDTNSGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWHEITPWKCLVWVWDSPVSDDHGGAGAGLLVVQKEDPPDSPAFALGA 1536
L R +A++ALGSGF+A+AA RAH+V W G G + N +GG G + +G TL PV+FTGFTWDG TVV KE PGCAR A+P T QK+ + W G GDR P Q G+ + D GG ++PCL VEA VP+++IVVDI+VPVS+GLVPRL TL+PQME+LA G+ CTP S LAP+CND + Y+PAFWPE L +G+ S SF SPAG G R T S +G+G + FRV+V T+DPAVEA+L Y+V+ V+V + +PFSKA AIQDAS VIPDDHI+FVHDADLFPPC LPDALRQTVV+GVQAVNLLL YENQ G C+YP+STFGPMAMY SD+ AVGGI D NSGRWG+EDTAF+HKVMLG LGVLRVHLPGLVHRWHEITPWKC+VWVW S + E P S A ALGA
Sbjct: 751 LPRSVVAQQALGSGFQAIAAYRAHEVTGWKGGGDSGSVQNKAEGGSAGSGVGSTTEPPVGEDEKTLLPVRFTGFTWDGSTVVAKETAPGCARTAKPPPTKLSTPGQKLFEPSEW-----GEDGDRSLPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQARRGMAESG-DGGGMEGRLRQQPCLKVEAAFVPTREIVVDIVVPVSAGLVPRLKTLLPQMEKLAKGSGCTPHHPSAPLAPQCNDADRYAPAFWPETLAIRGQSPSEWSFGLDYSEILEGSPAGGG-------------LRGGTAESDGTKGKGHAAAXXXVAAVKESSSFRVVVATEDPAVEAMLENYDVETVFVLSSSPFSKALAIQDASTVIPDDHIMFVHDADLFPPCTLPDALRQTVVQGVQAVNLLLAYENQPVPGNCIYPLSTFGPMAMYASDYRAVGGIADANSGRWGYEDTAFVHKVMLGEKPLGVLRVHLPGLVHRWHEITPWKCMVWVWGGAPSGSSSSDDGTVFQNTAEPPQRSAADALGA 1263
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: D7G308_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G308_ECTSI) HSP 1 Score: 227 bits (578), Expect = 7.620e-57 Identity = 170/450 (37.78%), Postives = 204/450 (45.33%), Query Frame = 1
Query: 103 LARRDLAKRALGSGFEAVAAVRAHDVQ-WPGRGGDNASGNMGQGGEQGQRQRQSKIGPGSGT----LPVQFTGFTWDGVTVVMKEVVPGCARVAQPVTPNFVDVQKMKDLQSWESTWVGYYGDRGSVPEEEEQNGSG-------VDDVDV------------DSGG-------KRPCLVVEAMVVPSKDIVVDIIVPVSSGLVPRLSTLMPQMERLALGAACTPLPDSNILAPKCNDPEYYSPAFWPEKLTRKGRRASSSFSSPAGNGGSWSQGDHGANNRSRVATEASPRLRGRGKGGGIGNGDDFRVIVVTDDPAVEALLTKYNVDAVYVATRAPFSKARAIQDASQVIPDDHILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGARGKCLYPISTFGPMAMYKSDFVAVGGIEDTNSGRWGFEDTAFLHKVMLGNAALG 1359
L R +A++ALGSGF+A+AA RAH+V W G G + N +GG G + P G LPV+FTGFTWDG TVV KE PGCAR A+P P + + + + S W G DR S+P E G G +D D D GG ++PCL VEA VP++DIVVDI+VPV + V+V + +PFSKA AIQDAS IPDDHI+FVHDADLFPPC LPDALRQTVV+GVQAVNLLL YEN G C+YP+STFGPMAMY SDF AVGGI D NSGRWG+EDTAFLHK ++ + G
Sbjct: 817 LPRSVVAQQALGSGFQAIAAYRAHEVTGWKGGGVSGSVQNKAEGGSAGSGVGSTTEPPVGGDEKPLLPVRFTGFTWDGSTVVAKETAPGCARTAKP-PPTKLSTPRQRLFEP--SEW-GEDDDR-SLPPSSEGGGRGRGGVAGSLDGGDAATQARRGMAESGDVGGGMEGRLRQQPCLKVEAAFVPTRDIVVDIVVPVET---------------------------------------------------------------------------------------------------------------------------------VFVLSSSPFSKALAIQDASTAIPDDHIMFVHDADLFPPCTLPDALRQTVVQGVQAVNLLLAYENHPVPGNCIYPLSTFGPMAMYASDFRAVGGIADANSGRWGYEDTAFLHKEVVDHIVRG 1132
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A6J2WNX2_CHACN (Beta-1,4-N-acetylgalactosaminyltransferase n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WNX2_CHACN) HSP 1 Score: 68.2 bits (165), Expect = 1.310e-7 Identity = 55/173 (31.79%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 913 GNGDD-FRVIVV----TDDPAVEALLTKYNVDAVYVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGARGK---CLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
G GD+ F +I+V TD AL T Y+ F ++ +Q +I DDH I+F+ D + P G D++R+ V G A ++ N GA + + ++ FG + +YKSD VAVGG+ + RWG ED L +++ G L V R++L H +H
Sbjct: 1157 GTGDNNFNIIIVDYSSTDMDIERALQTSQLPRKQYLRLEGNFERSAGLQAGIDLITDDHSIVFLCDLHIHFPMGFVDSVRKHCVEGHMAFAPIVMRLNCGATPQEPDGFWEVNGFGLLGIYKSDLVAVGGMNTKEFTDRWGGEDWELLDRILEGG--LEVERLYLRHFFHYYH 1327
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A6A4T7L9_SCOMX (Hexosyltransferase n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4T7L9_SCOMX) HSP 1 Score: 63.9 bits (154), Expect = 1.310e-6 Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 919 GDDFRVIVVTD----DPAVEALLTKYNVDAV-YVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGAR---GKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
GD +++TD D V+ L K ++ YV F ++ +Q +I DDH I+F+ D ++ P + D +R+ V G ++ N GA + ++ FG + +YKSD +AVGG+ RWG ED L +++ + L V R++L H +H
Sbjct: 266 GDTNFNLIITDYNSSDMDVKKALEKSSLPRYDYVKLSGNFERSAGLQTGIDLIKDDHSIVFLCDLHIYFPTSMIDTIRKHCVEGYMTFAPIVMRLNCGATPWDANGYWEVNGFGLLGIYKSDLIAVGGMNTREYKDRWGGEDWELLDRIL--KSGLEVDRIYLRNFYHHFH 434
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A8D3BNM6_SCOMX (Beta-1,4-N-acetylgalactosaminyltransferase n=2 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3BNM6_SCOMX) HSP 1 Score: 63.9 bits (154), Expect = 2.100e-6 Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 919 GDDFRVIVVTD----DPAVEALLTKYNVDAV-YVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGAR---GKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
GD +++TD D V+ L K ++ YV F ++ +Q +I DDH I+F+ D ++ P + D +R+ V G ++ N GA + ++ FG + +YKSD +AVGG+ RWG ED L +++ + L V R++L H +H
Sbjct: 585 GDTNFNLIITDYNSSDMDVKKALEKSSLPRYDYVKLSGNFERSAGLQTGIDLIKDDHSIVFLCDLHIYFPTSMIDTIRKHCVEGYMTFAPIVMRLNCGATPWDANGYWEVNGFGLLGIYKSDLIAVGGMNTREYKDRWGGEDWELLDRIL--KSGLEVDRIYLRNFYHHFH 753
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A2U9BXV1_SCOMX (Beta-1,4-N-acetylgalactosaminyltransferase n=4 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A2U9BXV1_SCOMX) HSP 1 Score: 63.9 bits (154), Expect = 2.200e-6 Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 1
Query: 919 GDDFRVIVVTD----DPAVEALLTKYNVDAV-YVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGAR---GKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
GD +++TD D V+ L K ++ YV F ++ +Q +I DDH I+F+ D ++ P + D +R+ V G ++ N GA + ++ FG + +YKSD +AVGG+ RWG ED L +++ + L V R++L H +H
Sbjct: 661 GDTNFNLIITDYNSSDMDVKKALEKSSLPRYDYVKLSGNFERSAGLQTGIDLIKDDHSIVFLCDLHIYFPTSMIDTIRKHCVEGYMTFAPIVMRLNCGATPWDANGYWEVNGFGLLGIYKSDLIAVGGMNTREYKDRWGGEDWELLDRIL--KSGLEVDRIYLRNFYHHFH 829
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A3Q3W8N5_MOLML (Hexosyltransferase n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3W8N5_MOLML) HSP 1 Score: 63.5 bits (153), Expect = 2.480e-6 Identity = 45/151 (29.80%), Postives = 76/151 (50.33%), Query Frame = 1
Query: 964 EALLTKYNVDAVYVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGAR---GKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
++LL +Y YV F ++ +Q +I DDH I+F+ D + P + D +R+ V G A ++ + GA + + ++ FG + +YKSD +AVGG+ + RWG ED L +++ A L V R++L H +H
Sbjct: 479 KSLLPRYK----YVKLSGNFERSAGLQAGVDLINDDHSIVFLCDLHIHFPPSIIDTVRKHCVEGYMAFAPIVLRLDCGATPSDARGYWEVNGFGLLGIYKSDLIAVGGMNTREFTDRWGGEDWELLDRIL--QAGLEVERIYLRNFFHHYH 623
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A6P7MXD2_BETSP (Beta-1,4-N-acetylgalactosaminyltransferase n=2 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MXD2_BETSP) HSP 1 Score: 59.3 bits (142), Expect = 6.170e-5 Identity = 41/139 (29.50%), Postives = 68/139 (48.92%), Query Frame = 1
Query: 1000 YVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGAR---GKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
YV F ++ +Q +I D+H I+F+ D + P + +R+ V G A ++ + GA + + ++ FG + +YKSD VAVGG+ RWG ED L +++ A L V R++L H +H
Sbjct: 879 YVKLTGNFERSAGLQAGVNLIHDNHSIVFLCDLHIHFPLSIIHTIRKHCVEGYMAFAPIVMRLDCGATPLDARGYWEVNGFGLLGIYKSDLVAVGGMNTKEYKDRWGGEDWELLDRIL--QAGLEVERIYLRNFFHHYH 1015
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: UPI00189E01CA (beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1 n=2 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189E01CA) HSP 1 Score: 59.3 bits (142), Expect = 6.240e-5 Identity = 43/141 (30.50%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 1000 YVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQAVNLLLPYENQGA-----RGKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
YV F ++ +Q ++ D H I+F+ D L P + D +R+ V G A ++ GA RG + ++ FG + +YKSD VAVGG+ RWG ED L +++ G L V R+++ H +H
Sbjct: 920 YVKLSGNFERSAGLQAGVDLLTDSHSIVFLCDLHLHFPPAIIDTIRKNCVEGYMAFAPIVMRLECGATPLDARGN--WEVNGFGLLGIYKSDLVAVGGMNTREYKDRWGGEDWELLDRILKGG--LEVERIYMRNFFHYFH 1056
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Match: A0A2I4ATY5_9TELE (Beta-1,4-N-acetylgalactosaminyltransferase n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4ATY5_9TELE) HSP 1 Score: 59.3 bits (142), Expect = 6.250e-5 Identity = 40/139 (28.78%), Postives = 67/139 (48.20%), Query Frame = 1
Query: 1000 YVATRAPFSKARAIQDASQVIPDDH-ILFVHDADLFPPCGLPDALRQTVVRGVQA---VNLLLPYENQGARGKCLYPISTFGPMAMYKSDFVAVGGIEDTN-SGRWGFEDTAFLHKVMLGNAALGVLRVHLPGLVHRWH 1401
Y+ F ++ +Q I DDH I+F+ D + P + D +R+ V G A + L L + + + + ++ FG + +YKSD +A+GG+ RWG ED L +++ G L V R++L H H
Sbjct: 924 YIKLSGNFERSAGLQAGIDQIDDDHSIVFLCDLHIHFPPSIIDTIRKHCVEGYMAFAPIVLRLGCGSTPSEARGYWEVNGFGLLGIYKSDLIAIGGMNTEEFRDRWGGEDWELLDRILQGG--LEVERIYLRNFFHYHH 1060 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3898.10158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3898.10158.1 >prot_H-paniculata_contig3898.10158.1 ID=prot_H-paniculata_contig3898.10158.1|Name=mRNA_H-paniculata_contig3898.10158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=440bp MGQGGEQGQRQRQSKIGPGSGTLPVQFTGFTWDGVTVVMKEVVPGCARVAback to top mRNA from alignment at H-paniculata_contig3898:2921..10572- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3898.10158.1 ID=mRNA_H-paniculata_contig3898.10158.1|Name=mRNA_H-paniculata_contig3898.10158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7652bp|location=Sequence derived from alignment at H-paniculata_contig3898:2921..10572- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3898:2921..10572- >mRNA_H-paniculata_contig3898.10158.1 ID=mRNA_H-paniculata_contig3898.10158.1|Name=mRNA_H-paniculata_contig3898.10158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2640bp|location=Sequence derived from alignment at H-paniculata_contig3898:2921..10572- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |