|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1136 |
| Cds size | 201 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3893.10155.1 >prot_H-paniculata_contig3893.10155.1 ID=prot_H-paniculata_contig3893.10155.1|Name=mRNA_H-paniculata_contig3893.10155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MSERLSDADRDPGQTQVASLVMALQRPSDPTMMQDPHQIVEVSNVAEQGL
VRLNRVKYSPRQHPVV* back to topmRNA from alignment at H-paniculata_contig3893:13689..16985+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3893.10155.1 ID=mRNA_H-paniculata_contig3893.10155.1|Name=mRNA_H-paniculata_contig3893.10155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3297bp|location=Sequence derived from alignment at H-paniculata_contig3893:13689..16985+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGGATAAGGGAGAAAGGGGGTACGGGCGAAACGACGGGATTTGTAATA
ATGACGTGTTACCGTCGGCCCCGCACGTTGGGCGACGAACGCGGGCGATG
AGCGAGCGGCTGAGCGATGCGGACCGAGATCCTGGGCAGACACAAGTCGC
TAGCTTAGTGGTGAGTGGCTATGCTCGTTCGTTTGTTTTAACATATTTTT
TCTGTTTAGATGGCCTCTGGATTCGTTTTGCTCTGTTTTTTATTGCGTGC
GTTATTTCGCTTCTGCTAAATTGCGAGGCAATTGTTGTCGTTGGTTGTTA
CTCATGCTCTTGCAGGCCTGGGGTGGGATATTTACATATATATACTACCT
TCGTCCCAAAAGTCTGCCTTATGACGTTATTTTGTAAAATATTTTTTGCA
ATTTCGGGTTTCGTGAAAATTAGAGGATATCATTCCAAAGTCTACACGTT
TAGCTTGTATTTGGACATGTTCAAAATATTTTTGAGTTCGAAATGGTTGA
TATCCAGGTATCTCTACACGTTTTTTTTTTTTTTTTTTTCAGAAATGACA
GATTTTGCAATAAAAAAAATCGAGTAGGCTGAAATCGGCTGAAAGTCATA
TTTAATGGTTGAAGAAGTCTCAGGGAGACCTTCGATTAAGAAATGGTTTG
TTGCGTGGTATCTATCCCTTGGCATTTCATACTACGTAGTGCAATAAATT
CATTTTTTATTACTGGCATCCTCCCCATTAATCCACCAACTGAAGGTCGC
GTCATGAGCGGCGTGTCAAGGGGACCAAGTGGTCCACAAGTCCCTCACGC
TGCCTTTTCCTGCTGTCGGTATGCCTTACGTCTAAGTTGTTTCCCCCAAC
GCTTTGAACACTTCCGCTATTTTCCCCATCCATCCTCACTTTTGGCGCTT
GGGTGTCTGGTGCTCTTACTATTATACGGTTCTTATTTGTGCGGCACGTT
TCGGCGCAAGCGAAACATGACGATTTTCATTTTGGCACCTTGTTAAGTGT
GCACTGGTAAGGACGACAGTAGCAAGGACAAATGAAATACTACATCTCTC
AACCCCTCAGCTCTTGTAAGTCTATCGGCTGCGCCGCATGCGCCTTCGGT
GGCTGTGGTGCTGCCTGAACGCATGTTGACGGTGAGTTGCTCGCTGATCA
CTCCGCAAACTGTGGCAGATCGATTCCGTCACGGATCACGTTGCTTGTGA
TAATCGTTCCCAATCAGCGCAACACCCCGGACCAACGTGATCTGAGCTTC
GTTACTGAATTTTTTGTTTACTGAAGCGCAAAGAAACAGGTTTTCTTGCC
GAAATTGTTCAAAGTATTGCATTCTCGAGCGACTATATGCAAGACAAGTG
TACACATGAACGCGGGTGGGTATGCACGTTCGGAACTTGAGCGAATATAC
AATTATTGCATGGCTGTTTGTTTTCCGGATGGTACAGTGCATGTCTCATC
GGTATTTCCCCGAGTGTTAGAGTGTTTCAATGGTGGAGTACACAACGAAT
ACTGTATTCACGTTTTGTTTTTCTCGTTATTTTTGGTGTCCTTTATTCGT
ATTTGTTTGGAGGAGAGTGGAAATCTTCCATTTCCGAATAAAAAAAAACA
CACACACACGCGTTTAGATGCCTAAATAGTTCTGAAACATACTGAACCAT
ATTGGATTCGAAGAACATTTTGAAGATATCTATCTATCTACATGCAAGCT
GAACGTGTAGGCTTTCGAATGATAGACTTCGCTTTGGATGAAGACCAAAA
TTGCGAAACACATTTCCAACATGCCGTTTTGAGCCAGACGTATGGGACAG
AGGTAGTGTATGTATAAATGTGCCTGGTATGTTTATCGACAAGAGTAAGA
CCATTTGATCAACGCTCGAATGAATAAGATTTGTCCATTCCAGTTCTAGG
AGAGGGCAGCACCCACGACCATGATGGATGCCACGGTGATTCAATTCCCC
CTCCCCCTCCCCCTATTAATACAATTTAGCTTGTACGTTTACACATGTAG
AGTTTCAGATGAGGTGCATAATCTCACCACAGGTACAATCGACTTGTTCT
ATGAGCGTCCGAGCTTGGTTCTATTTCCCCACCCCTCCCCCAACTTGCAA
CCCCCCCCCGTTTTTCATTTGTTAGCCATATGAAAGGTCAATTGTATTGT
ATTGCAGGAAGATTTTTTTTTTTTTTTGGTCATCCTTTACAGCCAGTTTC
CAAGGCATCAAACAGGCTGTTTTTCTTTGCTTAATATCTCTTGACGGGAA
GCTTAAGGTATGCTCTCATATACAACGAGCTTTTTTTTTCTTTTTTTTCT
TTTTTTTCTTGTCCTTGACAGATGGCCTTGCAAAGACCAAGTGATCCCAC
GATGATGCAGGATCCTCATCAGATCGTGGAGGTATCGAATGTGGCTGAGC
AAGGACTGGTCCGTTTGAACCGGGTCAAGTACTCTCCTCGACAACACCCC
GTGGTTTAAAGAGGCGTGTATCCAACAGTAGGCGTACATCTGCCAAGCCC
CCGTGGGTTATGATCGGCTCGGATTAGTTTTTTTTTTGAAGCCATCGAAC
CTAAGGGTCAACCGCATCTATGAGGGTCTTGCTTAAGAGAGATACGTTGT
AGAGGAATGAGGTAGGGCGGGGCGAGGGGTTACTTGCTTGCTTGCTCGCT
CGGGCGCGGGATGCTCCACCCCGCGGGAGATAGTAGACGAAAACAAGAGC
GGTTTGGTTGTGTGATGTGTGATGCTCGCTCGCGGGGCCGGTTTTGTTTT
TCTTTTTTGTTTTTTAGTTAGTTACGCAATTTGGGGCATGGCGTTTTGTG
CCGCGGTTACAGGAACCTTGTCCATGCGAGCGCAATCCACATTCCAACCC
TAGCGTTGACTTCTTGTGATTAGGAAATGGATTGGATGATGAGTGAGATT
GTTACATTTATTGGGGGTCACACAGCATATGGTTGATTTTGTGTGTTTCA
GGCTGCGTGTTGTGTTGGGCAGCACAACGAGGTTGTGTTGTATGACTTTA
AAAACCCGTATTTATGGCTGTCCTTCGGCTATACCCCCCTTTTCATTGCG
TGGGGGTATGTCCGGAACAAGAAATTTCCGAGAAAAGGACAGTTATGACG
TGACGGATTGGGGGAATCGAGGGTAAAGAAAGGGTGGTGCTTCTTAATCC
GTTTTTCCTTTTCTGTATCCCCTCCTGTGTACCCGCCAGCTCTGCACCGT
TCTCATTTTCGCTGATGAAAAATAGTAGGTTTTTGCCTCGTGATGGCTCG
AGAAAATGGATCTTGTCTGGTGGGCAATTTTCTCGAAGGGGAGGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3893:13689..16985+ >mRNA_H-paniculata_contig3893.10155.1 ID=mRNA_H-paniculata_contig3893.10155.1|Name=mRNA_H-paniculata_contig3893.10155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at H-paniculata_contig3893:13689..16985+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGAGCGGCTGAGCGATGCGGACCGAGATCCTGGGCAGACACAAGT
CGCTAGCTTAGTGATGAGCGAGCGGCTGAGCGATGCGGACCGAGATCCTG
GGCAGACACAAGTCGCTAGCTTAGTGATGGCCTTGCAAAGACCAAGTGAT
CCCACGATGATGCAGGATCCTCATCAGATCGTGGAGGTATCGAATGTGGC
TGAGCAAGGACTGGTCCGTTTGAACCGGGTCAAGTACTCTCCTCGACAAC
ACCCCGTGGTTTAAATGGCCTTGCAAAGACCAAGTGATCCCACGATGATG
CAGGATCCTCATCAGATCGTGGAGGTATCGAATGTGGCTGAGCAAGGACT
GGTCCGTTTGAACCGGGTCAAGTACTCTCCTCGACAACACCCCGTGGTTT
AA back to top
|