mRNA_H-paniculata_contig38892.10147.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 180 bits (457), Expect = 4.710e-54 Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TVDH+ R L VT GF G+TNDKSIIRYD A+ + EDP Y ++ F ++ DGT + KG YLLVDNGYH+W +IP SK + + +SK LESVRKDVECFF ++ G FRILKL I Y ++E IDNVFF CCILHNM
Sbjct: 21 YQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNM 162
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.540e-52 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TVDH+ RA+ VT GF G+TNDK+I+ +D A+ + D Y ++TF L+NEDGT KG Y L DNGYH+W I+I SK L++++ +SK LESVRKDVECFF +L GRFRILKL + Y+ +E+IDNVFF CCILHNM
Sbjct: 109 YQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNM 250
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.770e-52 Identity = 85/142 (59.86%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TVDH+ R L VT GF G+TNDKSIIRYD A+ + EDP Y ++ F ++ DGT + KG YLLVDNGYH+W +IP SK + + +SK LESVRKDVECFF ++ GRFRILKL I Y ++E IDNVFF CCILHNM
Sbjct: 262 YQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNM 403
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 174 bits (441), Expect = 5.120e-51 Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TVDH+GRA+ VT GF G+TNDK+ + +D A++ + D Y ++TF ++N+DGT KG Y+LVDNGYH+W I+I SK L++ + +SK LESVRKDVECFF +L GR RIL L + ++ +E+IDNVFF CCILHNM
Sbjct: 64 YQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNM 205
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.300e-50 Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
+ TVDHSGR L VT GF GATNDK+IIRYD A+ + DP Y ++ ++L+ +DG E KG YLLVDNGYH+W +IP SK + + +SK LES RKDVEC+F +L GRFRI KL I + ++E IDNVFF CCILHNM
Sbjct: 187 FQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 328
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.480e-49 Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
+ TVDHSGR L VT GF GATNDK+IIRYD A+ + DP Y ++ ++L+ +DG E KG YLLVDNGYH+W +IP SK + + +SK LES RKDVEC+F +L GRFRI KL I + ++E IDNVFF CCILHNM
Sbjct: 278 FQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNM 419
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 166 bits (419), Expect = 4.090e-48 Identity = 76/142 (53.52%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TVDH GRAL VT GF GATNDK+IIRYD + + + Y +R ++L +GT +G +L++DN YH+W +I SK ++++T +S+ LESVRKDVECFF +L GRFRILKL + Y ++E IDN+FF CCILHNM
Sbjct: 21 YEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNM 162
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 169 bits (427), Expect = 7.600e-48 Identity = 76/142 (53.52%), Postives = 103/142 (72.54%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TV+H+GRA+ VT GF +TNDK+ + +D ++ + D Y ++TF ++NEDGT KG YLLVDNGYH+W I++ +K L++ + +SK LESVRKDVECFF +L G FRI K+ + Y E+E+IDNVFF CCILHNM
Sbjct: 204 YQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNM 345
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 164 bits (415), Expect = 1.250e-45 Identity = 83/170 (48.82%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYC----------------------------DRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TVDH+GRA+ VT GF G+TNDK+I+ +D A++ + D Y ++TF ++NEDGT KG YLLVDNGYH+W I+I SK L++ + +SK LESVRKDVECFF +L GRFRILKL + Y+ +E+IDNVFF C ILHNM
Sbjct: 191 YQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNM 360
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 162 bits (411), Expect = 6.710e-45 Identity = 76/142 (53.52%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 43 YLATVDHSGRALGVTTGFPGATNDKSIIRYDVALQTVGEDPTYCDRTFRLFNEDGTWMEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFFVLNGRFRILKLPILYREKEKIDNVFFACCILHNM 468
Y TV+H+GR L VT GF G+TNDK+II D A+ + D Y ++ F + +DGT KG YL+VDNGYH+W ++I SK L++ + +SK LESVRKDVECFF +L RFRILKL + Y+++E++D VFF CCILHNM
Sbjct: 233 YQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNM 374 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38892.10147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig38892.10147.1 >prot_H-paniculata_contig38892.10147.1 ID=prot_H-paniculata_contig38892.10147.1|Name=mRNA_H-paniculata_contig38892.10147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp MEHKGVYLLVDNGYHQWAIVIPLSKRSLTDEETRWSKTLESVRKDVECFFback to top mRNA from alignment at H-paniculata_contig38892:62..982+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig38892.10147.1 ID=mRNA_H-paniculata_contig38892.10147.1|Name=mRNA_H-paniculata_contig38892.10147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=921bp|location=Sequence derived from alignment at H-paniculata_contig38892:62..982+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig38892:62..982+ >mRNA_H-paniculata_contig38892.10147.1 ID=mRNA_H-paniculata_contig38892.10147.1|Name=mRNA_H-paniculata_contig38892.10147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig38892:62..982+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |