prot_H-paniculata_contig3889.10145.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3889.10145.1
Unique Nameprot_H-paniculata_contig3889.10145.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length465
Homology
BLAST of mRNA_H-paniculata_contig3889.10145.1 vs. uniprot
Match: D8LTK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK0_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 1.510e-90
Identity = 175/360 (48.61%), Postives = 213/360 (59.17%), Query Frame = 0
Query:  110 PTRVRVRPQRSVRGPRGVRDIPVGKFLRPGVLGGLSVSPWVVQEEAERVRRMGSHRLALSKDAFVFRRKRDEGSLLDYAEETNGVKRFLEQTHPIRDESCPPKCGFSYRRVGHEIEPPDFYDTSLDSVRPRTVGYSPGHVRSLSPTPALMWGGRASARENLQWRKGTGGSLGAVEASLGGTEMCRSRRIRP-RSVSMCEQYPGIKQGNHNDAHSDEDPGREDECFSRRKLRQNIAQIRPMWSHQGPRSA----LSLSSPYPALRPFSSSYDHLGRTMTREVLSRATTNLRPQQFDTLQRRSEYCDALNVKRGARQLRLATEAKSVMLEKERAKNAAEEREGIKGFEGSLKAVLTKKWKYL 464
            P++VR +P+RSVRGPRGV +I  G F +PGVLGGL+VSPWVV+EE ER +R+ SH+  +S +  VFRRKR+EG LLDYAEE + VKRFL++ HPIRDESCPPK GFSY                                               S+R +++W +GTGGSLG V+A L GT  C     RP RS  +  Q     Q    +  +DE   R +          +  ++RPMWS QG R+      S S   PALRPFSSS D LGR M+REVLSR+T  L+PQQFDT QRRSEY  AL  +R ARQ R A    +  LEKER KNA EEREGI  FEGSLK +L +KWKYL
Sbjct:    4 PSKVRTKPRRSVRGPRGVPNIEPGTFKKPGVLGGLNVSPWVVEEEVERAQRVLSHKATISTNPVVFRRKREEGGLLDYAEEMHAVKRFLDKIHPIRDESCPPKSGFSYSE---------------------------------------------SSRVSMEWGEGTGGSLGTVKACLRGTSRCGGSATRPSRSCPLPSQRSRFGQSWETEDFTDEGSPRNNNQGQEADRDGSGIEVRPMWSRQGLRATRPGTTSSSFQGPALRPFSSSCDQLGRPMSREVLSRSTAGLKPQQFDTTQRRSEYTCALLGRREARQSREAGRVVAAQLEKERRKNATEEREGIDKFEGSLKEILAQKWKYL 318          
BLAST of mRNA_H-paniculata_contig3889.10145.1 vs. uniprot
Match: A0A6H5KWZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWZ1_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.320e-29
Identity = 74/121 (61.16%), Postives = 84/121 (69.42%), Query Frame = 0
Query:  348 MWSHQGPRSA----LSLSSPYPALRPFSSSYDHLGRTMTREVLSRATTNLRPQQFDTLQRRSEYCDALNVKRGARQLRLATEAKSVMLEKERAKNAAEEREGIKGFEGSLKAVLTKKWKYL 464
            MWS QG R+      S S   PALRPFSSS D LGR M+R VLSR+T  L+PQQFDT QRRSEY  AL  +R AR+ R A    +  LEKER KNA EEREGI+ FEGSLK +L +KWKYL
Sbjct:    1 MWSRQGLRATRPGTTSSSFQGPALRPFSSSRDQLGRPMSRAVLSRSTAGLKPQQFDTTQRRSEYTCALLGRREARRSREAGRIVAEQLEKERRKNATEEREGIEKFEGSLKEILAQKWKYL 121          
BLAST of mRNA_H-paniculata_contig3889.10145.1 vs. uniprot
Match: A0A835YW10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW10_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.150e-8
Identity = 35/89 (39.33%), Postives = 49/89 (55.06%), Query Frame = 0
Query:  177 RKRDEGSLLDYAEETNGVKRFLEQTHPIRDESCP--PKCGFSYRRV-----GHEIEPPDFYDTSLDSVRPRTVGYSPGHVRSLSPTPAL 258
            R+ + GSL   A E + ++      HP+RD      P+ G+++ R+     G    P   YD    +VRPRT GY+PGHVRSLSPTP +
Sbjct:  164 RRCEPGSLQQIALEQHTLRHSAGHIHPVRDPRALSLPRAGYTFSRLPPALRGAREAPEACYDVQFSAVRPRTTGYNPGHVRSLSPTPTM 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3889.10145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTK0_ECTSI1.510e-9048.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWZ1_9PHAE1.320e-2961.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YW10_9STRA4.150e-839.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 423..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3889contigH-paniculata_contig3889:3405..7690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3889.10145.1mRNA_H-paniculata_contig3889.10145.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3889 3405..7690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3889.10145.1 ID=prot_H-paniculata_contig3889.10145.1|Name=mRNA_H-paniculata_contig3889.10145.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=465bp
MKGVNENMCTSSTASSEQEGDGENSAPINLNHSMLKSAISSGMPTFLHTT
GVPIIDRRNKKLVTSDALAQTQRDTLPPGDSVYPPAAPLCLRGHTPATGG
TGATTRQNIPTRVRVRPQRSVRGPRGVRDIPVGKFLRPGVLGGLSVSPWV
VQEEAERVRRMGSHRLALSKDAFVFRRKRDEGSLLDYAEETNGVKRFLEQ
THPIRDESCPPKCGFSYRRVGHEIEPPDFYDTSLDSVRPRTVGYSPGHVR
SLSPTPALMWGGRASARENLQWRKGTGGSLGAVEASLGGTEMCRSRRIRP
RSVSMCEQYPGIKQGNHNDAHSDEDPGREDECFSRRKLRQNIAQIRPMWS
HQGPRSALSLSSPYPALRPFSSSYDHLGRTMTREVLSRATTNLRPQQFDT
LQRRSEYCDALNVKRGARQLRLATEAKSVMLEKERAKNAAEEREGIKGFE
GSLKAVLTKKWKYL*
back to top