prot_H-paniculata_contig1158.1013.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1158.1013.1
Unique Nameprot_H-paniculata_contig1158.1013.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length231
Homology
BLAST of mRNA_H-paniculata_contig1158.1013.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 2.160e-27
Identity = 100/230 (43.48%), Postives = 149/230 (64.78%), Query Frame = 0
Query:    2 AARVLRERHLGARRARQSSLQERESLTASEATRKARQELEEQENAERLALAEDQARNRLEALDRARMETEAATAVGRSMREEADRLLSDHRDRILEMESVLKDDALRQRTALETLLADKRKTAEAARANLSPLSMEAASDAATRANAADQAERAALERELKSKLAHIENDRKAFEICVEKIVASTQGAVGKSSERSREEAAAEWAAAAAQARRDELKGIHEREIAALKIQ 231
            A+R LRER   AR AR+++LQ++ESL+ASEA +KAR ELE+ E      L ED   +R+EA+ RA +E EAA     S+REEADRLL++HR+R+ +++  +K DA RQ+T L+  LA +RK  +A  A   P+S++AA+ AAT A++A++AER  LER L  +   +++D + +E  V+ I+ S + A   S        AAE A  A + R++ L+ IHER I A++ Q
Sbjct: 1324 ASRALRERLQAARAAREATLQDKESLSASEAAKKARTELEDGEERAIEELMEDLRNDRVEAIGRANLEAEAAGTD--SLREEADRLLAEHRNRMAQLQEAMKVDAQRQQTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVQNILTSAEQAAA-SGVYGASLGAAE-AEMAQEERKESLRAIHERAIVAMEAQ 1549          
BLAST of mRNA_H-paniculata_contig1158.1013.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.910e-26
Identity = 97/230 (42.17%), Postives = 145/230 (63.04%), Query Frame = 0
Query:    2 AARVLRERHLGARRARQSSLQERESLTASEATRKARQELEEQENAERLALAEDQARNRLEALDRARMETEAATAVGRSMREEADRLLSDHRDRILEMESVLKDDALRQRTALETLLADKRKTAEAARANLSPLSMEAASDAATRANAADQAERAALERELKSKLAHIENDRKAFEICVEKIVASTQGAVGKSSERSREEAAAEWAAAAAQARRDELKGIHEREIAALKIQ 231
            A+R LRER   AR AR+++LQ++ESL+ASEA RKAR ELE+ E      L ED   +R+EA+ RA +E EAA     S+R EADRLL++HR+R+ +++  +K DA RQ+T L+  LA +RK  +A  A   P+S++AA+ AAT A++A++AER  LER L  +   +++D + +E  V+ I+ S + A       +   AA   A    + R   L+ IHER +AA++ Q
Sbjct: 4887 ASRALRERLQAARAAREATLQDKESLSASEAARKARTELEDGEERAIEELMEDLRNDRVEAIGRANLEAEAAGTD--SLRAEADRLLAEHRNRMAQLQEAMKVDAQRQKTNLQKRLAARRKGTDAVVAAAQPVSLQAAAKAATLADSAEEAERINLERSLLDEANRLQSDAEGYERSVQNILTSAEHAAASGVYGASPRAAE--AEMVHEERNQSLRAIHERAMAAMETQ 5112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1158.1013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWQ4_9PHAE2.160e-2743.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR26_ECTSI1.910e-2642.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1158contigH-paniculata_contig1158:5180..8273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1158.1013.1mRNA_H-paniculata_contig1158.1013.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1158 5180..8274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1158.1013.1 ID=prot_H-paniculata_contig1158.1013.1|Name=mRNA_H-paniculata_contig1158.1013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp
RAARVLRERHLGARRARQSSLQERESLTASEATRKARQELEEQENAERLA
LAEDQARNRLEALDRARMETEAATAVGRSMREEADRLLSDHRDRILEMES
VLKDDALRQRTALETLLADKRKTAEAARANLSPLSMEAASDAATRANAAD
QAERAALERELKSKLAHIENDRKAFEICVEKIVASTQGAVGKSSERSREE
AAAEWAAAAAQARRDELKGIHEREIAALKIQ
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