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Homology
BLAST of mRNA_H-paniculata_contig3888.10143.1 vs. uniprot
Match: D8LJE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE4_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.720e-45 Identity = 83/234 (35.47%), Postives = 136/234 (58.12%), Query Frame = 3
Query: 6 CFCEDIDRVSVSIRRHNKHELPLPKYCGVSHGTGIVHGSSACVFPDGSEPTNFIGLWKCMEKVATCPPDDDRQQMAVFRDPRPMAVSTYYSLVK----FKMLRTQETVDEYVTRVLPTLCQWIAVRHILFEGFMADQSDVYWYEDALDDPLSWHFEWLASVGLHIPPKVVEGAASAAARHDFVFLTKGVDRHPGG--VTLRRSYKDEITAETLSGFDAVLRTWLPPIVLARLGV 689
C C +D+VS+ + KH+LP+P C H + + C +G N+ +C+++ C DDR QM + RDPR +AVS+++ L F T E+VD +V R+LPT+C +I +R+++ + ++ + Y+++L DPL WH WL+SVGL PP VV A + + R ++ F KGVD+HPGG T +R+++DEI+ + + + R WLPP++L + G+
Sbjct: 190 CPCSTVDKVSIMVSSLFKHDLPVPPSCPWQHVDNVTPENKGCTTVNGRRVGNYTDTVECLQQHP-CRIVDDRIQMLILRDPRAVAVSSFFHLKTHHHPFWKHLTDESVDSFVLRMLPTICHFIHLRYLVLHEKLGGKTVEFTYDESLADPLQWHQRWLSSVGLTPPPGVVLQATNTSLRREYGFAGKGVDKHPGGKEATEKRTWEDEISHDVAEQLEGICREWLPPVLLEKFGI 422
BLAST of mRNA_H-paniculata_contig3888.10143.1 vs. uniprot
Match: A0A6H5KDV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV7_9PHAE) HSP 1 Score: 162 bits (410), Expect = 5.300e-45 Identity = 81/227 (35.68%), Postives = 125/227 (55.07%), Query Frame = 3
Query: 27 RVSVSIRRHNKHELPLPKYCGVSHGTGIVHGSSACVFPDGSEPTNFIGLWKCMEKVATCPPDDDRQQMAVFRDPRPMAVSTYYSLVKF--KMLRTQETVDEYVTRVLPTLCQWIAVRHILFEGFMADQSDVYWYEDALDDPLSWHFEWLASVGLHIPPKVVEGAASAAARHDFVFLTKGVDRHPGGVTL--RRSYKDEITAETLSGFDAVLRTWLPPIVLARLGVAP 695
RV +SI +KH LP+ + C SHG+G VH C DG LW CM+K C D+R Q RDPR +AVSTY+ V + ++D+ V +LP LC + +RHILF G ++++++++WYE ++DP WH+ W + GL +P ++G + H K ++ HPGG R+++DE++ D++LR WLP ++LAR G+ P
Sbjct: 4 RVEISISTVDKHRLPVNESCPWSHGSGTVHEGDGCWSFDGHPVETGADLWACMQKTP-CEITDNRLQFVPIRDPRAVAVSTYFHRVHKDNNYQKLHPSLDQTVLEILPVLCHFTTLRHILFGGLLSNRTELFWYEQTVEDPFDWHYRWASFAGLILPGGWIDGMVAENQAH------KHLNPHPGGAETSDNRTWQDEVSPGIRPEMDSILRKWLPGVLLARYGIPP 223
BLAST of mRNA_H-paniculata_contig3888.10143.1 vs. uniprot
Match: A0A6H5JG38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG38_9PHAE) HSP 1 Score: 128 bits (321), Expect = 3.260e-32 Identity = 63/166 (37.95%), Postives = 99/166 (59.64%), Query Frame = 3
Query: 213 DDRQQMAVFRDPRPMAVSTYYSLVKFKMLRTQ-----ETVDEYVTRVLPTLCQWIAVRHILFEGFMADQSDVYWYEDALDDPLSWHFEWLASVGLHIPPKVVEGAASAAARHDFVFLTKGVDRHPGG--VTLRRSYKDEITAETLSGFDAVLRTWLPPIVLARLGV 689
DD Q AV RDPR +AVSTY+ + + +++DE V +LP LCQ+ +RH+LF+G ++D+S+++WYEDA+ DPL WH+ W + G +P ++ + D HPGG V+ +R+++DEI+ D++LRTWLP ++L RLG+
Sbjct: 27 DDSLQFAVLRDPRAVAVSTYFYVKSHPAFYSDHVSRGKSLDEAVLLILPQLCQFTTIRHLLFDGQLSDKSEIFWYEDAMRDPLGWHYRWASFAGFALPASWIKDIDATLPEAQQKVKR---DPHPGGQQVSSKRTWEDEISPAIREEMDSILRTWLPGVLLERLGI 189
BLAST of mRNA_H-paniculata_contig3888.10143.1 vs. uniprot
Match: D7G2T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T4_ECTSI) HSP 1 Score: 118 bits (296), Expect = 6.610e-29 Identity = 61/159 (38.36%), Postives = 100/159 (62.89%), Query Frame = 3
Query: 240 RDPRPMAVSTYY----SLVKFKMLRTQETVDEYVTRVLPTLCQWIAVRHILFEGFMADQSDVYWYEDALDDPLSWHFEWLASVGLHIPP---KVVEGAASAAARHDFVFLTKGVDRHPGG--VTLRRSYKDEITAETLSGFDAVLRTWLPPIVLARLGV 689
RDPR +AVSTY+ S + +++DE V +LP +CQ+ +RHILF+G ++D+S+++WYEDA+ DPL W+ W + G +P K ++ + + AA +D + + HPGG V+ R+++DE++ ET +++LRTWLP ++LAR V
Sbjct: 2 RDPRAVAVSTYFYIKRSPIHLHHPSRGKSLDEAVVVILPQICQFTTIRHILFDGQLSDRSEIFWYEDAMRDPLGWYNRWASLAGFTLPARWIKDIQASLTEAAEND-----RKREPHPGGQVVSSDRTWEDEVSPETRLEMNSILRTWLPGVLLARFDV 155
BLAST of mRNA_H-paniculata_contig3888.10143.1 vs. uniprot
Match: D7FUF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF6_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 2.680e-19 Identity = 40/108 (37.04%), Postives = 69/108 (63.89%), Query Frame = 3
Query: 378 LFEGFMADQSDVYWYEDALDDPLSWHFEWLASVGLHIPPKVVEGAASAAARHDFVFLTKGVDRHPGGV--TLRRSYKDEITAETLSGFDAVLRTWLPPIVLARLGVAP 695
+FEG ++D+S+++WYE+ L+DP +WH+ W + GL +P ++G A + +F +RHPGG T +R+++DE++ +++LR WLPP++LAR V P
Sbjct: 1 MFEGLLSDRSEMFWYEETLEDPFAWHYRWASFAGLILPRAWIDGMV--AVNQERLFF----NRHPGGGKRTAKRTWRDEVSPGIHHDMESILRKWLPPVLLARFEVPP 102
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1003 |
| Cds size | 519 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3888.10143.1 >prot_H-paniculata_contig3888.10143.1 ID=prot_H-paniculata_contig3888.10143.1|Name=mRNA_H-paniculata_contig3888.10143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
MEKVATCPPDDDRQQMAVFRDPRPMAVSTYYSLVKFKMLRTQETVDEYVT
RVLPTLCQWIAVRHILFEGFMADQSDVYWYEDALDDPLSWHFEWLASVGL
HIPPKVVEGAASAAARHDFVFLTKGVDRHPGGVTLRRSYKDEITAETLSG
FDAVLRTWLPPIVLARLGVAPA* back to topmRNA from alignment at H-paniculata_contig3888:1234..12809- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3888.10143.1 ID=mRNA_H-paniculata_contig3888.10143.1|Name=mRNA_H-paniculata_contig3888.10143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11576bp|location=Sequence derived from alignment at H-paniculata_contig3888:1234..12809- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCATTGCTTCTGCGAGGATATAGACAGGTGAAGCTTCATCGATCGTAGC
GACCTAAATTGAAACTGGGAGATAAAACAGGTCACGAAACGTTCAGTTAC
GTACGCGGTGGAGTAGAGGCTATTGGCGTGATTCTTTTGCGAGGTTTCAT
CAATTATTCACGTATATTGCTGTTGTACAAAATGATTATCTCCTGCGTTA
TCCCAACCAAGTTTATGCAGTACCACGCCCATCCCCAATTGCCACCAGGT
GCGTGTGGAATTATGACACCACGTTACTGTACCTCCTAGCATTGCTTTCT
GCTGTTGACCCCTCTTATGTTATATCTATCTTGCTGTTTATATCGGTTTT
CCGTTGCATTTCAATCTCGTCGAGGACCAGGGTATCTGTCAGCATTCGGC
GACACAACAAGCACGAGCTTCCGCTGCCCAAATACTGCGGGGTGTCACAT
GGAACAGGGATAGTACACGGATCTTCAGCCTGTGTCTTTCCCGATGGGTC
CGAGCCTACAAATTTCATCGGGCTTTGGAAGTGCATGGAAAAGGTGCGAT
GCAGTCCTAATATTCGTGTTTGCCATCTATCACCCGTCGATTGAGGCAGC
CTCCCCGTGGACCTTTCGCCCCGCTACCCCCATCAATTCCCAATGCCGAC
GGTCGCAACACGTGCTTGTTCTCCCTGCAAGGAAAATATGGATAAAGAGA
ACGGCTGACATAATGTTACCGGAGCAGGAGTGGACGTGAAGTCCTTTTCT
CCTCGTCAAATAATTCGTTGTTACGTGGCCACATTTCAGGAAAGATTGCT
ATGATAATCTACAAGGGCAAGCTCAGCCCCGCCCCCTGCACGGGGGGGGG
TATGGCCACGGTATTGAAGTTGGAGATAACAGATGATCGATAGAAAGTAT
TTCAGAGGAAGTAAGACGTGACAAAATGTCTCGAAAATCGACTTCATTGA
CCGGAAAGGTATTCCTGGGTAATTGTCCAGGAGACCAAAGCAGAAATCGG
ATGTTGAGCGACGTGGCTCACTTGAACTAATACACGTACAACGGGTTCCA
GATACAATCCTTTGTGATGCACGATAGTGTTTCTTAATTCACACAGTACA
CATCCGACACCGAAAACCTCGGAACGGTAAAGAATCTAGATATTATAGTA
TATATTATCTCTGTAGTAAACAGAACACGTAAATACTAAAGCGCCGCTTT
TGCGAATCTGTAACGTCTTCTAAAGTGTACTGAGGGAATGGTACACTCGT
ACATATGTACATCACACATGCGGTAGATCTATTAGATAAATGCATCAGAG
ACGACGTTATATCTACCGAACAATAGAGAAGACCGGCAATAGAGAGTTTC
GGACAAAAAATGGTTCTTGTCTTAGGATTTGTCTCAGAGTTTGTCTCAGG
ATTTGTCTCAGAATATGTCTCAGAATATGTCTCACGATTTGTCTCAGATA
TGTCTCAGAAGATGTCTCAGATTTGTCTCAGAATTTGTCTCAGAATATGT
CTCAGGATTTGTCTCAGAATATGTCTCACGATTTGTCTCAGAATATGTCT
CAGAACATGTCTCACGATTTATCTCAGAATATGTCTCAGAATATGTCTCA
GGATATGTCTCACGATTTGTTAAGGGATTTATCAAGGGATTTGTCTCAGG
ATTTGTCTCAGAATATGTCTCAGGATTTGTCTCACGATTTGTCAAGGGAT
TTATCAAGGGATTTGTCAAGGGATTTGTCTCAGAATATGTCTTAGAATAT
GTCTCAGAATATGTCTCAGGATTTGTCTCGGGATTTGTCAAGGGATTTGT
CTCGGGATTTGTCTCAGAATATATCTCAGAATATGTCTCAGGATTTGTCT
CAGAATATGTCTCAGAGTTTTCACTGAGGATAGGAAAATCCCCGAGGCTG
AAAAAGTTAGAATTTTTCCAATATGTTGGGATTTAGGTTCGGTAGAACCG
ACCGTGACGTGGGGGGTGTATGTTTTATGTGGGTCACATAAGATGTATGT
TGCGGTTCGCAGTATGAGTGATCCACAGCTAATTCTCGAAGCGTTAGCAG
CAACCAAAAAAAGAAAAACACTCTCAGGGTCAGGACCTCCTTTTCGAAAA
ATAATCCTGAACGTTTCTTTTTTATAAGGGTTGTGGATCAGCGGAAGAAC
GGGGGGGAAAGTCATGTATCAACCAAATTCCCGACCCTGAGCCAAAATCC
CGAGAAAAAATAGAGTTTTTGTTTTTTTTCCGAAACTTGCTAATGTATCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATAT
ATATATATATACATTCTTCTTCTGTCCCATATGAAAACCAGAATTTCGGG
TCGAATGGTTGATTCCTAAGACCAAAACACGCGCCGTGAGGAAAAGTACT
CGACAGAAGGTCGTTTTTAGGGACTTTTCGTATTGTACACGAGTACAGTA
TGTCGTGATTAGAGACTATTTATACTATCTCCGATTAGTTCTTTTTACAT
TAGAATCCTACATATTTTGGGGGTTGAACCCCCAAAATATTGAGTCAAGT
AGTTGACTTTTAACACCAAAACACACACCGTGAAAAACAGTACTCGGCCG
AGAATCGCCCAAAAGTGCACGTTTTTTTTTTTTAGTTCTAGTGGAAAAGT
CCCGAAGAAGGGCCTTTTTTCAGCTGTGTCTTTTTTTTCACGGCCAACAT
ATTGTGTTGAAAGTCAACCGTTTGACCCAAAACTTAGATTTTCAATCCAA
AAACATGTAGAATTTCATTAAAAAAAATACTAATAATCCGGGATTTTCAA
GTGCCTTTATAACCATAACTGAGTATTTTTACTTATAAGATAAAGAAAGT
ATGTAAATATGTATGTTATATTCAGATATAATTAAACGTACAAAATATGG
GGCAAACGGGTTGATGCCCACTGGTGCAGTGCAGAGGGAAACATATGGGG
AAAAGAGAAACACACTGTCGAAGGCTGGGTTCGAGCCTGAAACATGAAAC
TGATCATTGGAACAAGTGTTTACTCCTTGAGCTAAATATAGAGTCCGGGT
CCTTCGCCAGGGAACAACAAGCATGAGGCAAAGGTCATGATATAGAAAAC
ATAGCTCCTCTATCTAATAAGTATACTTAGTTATGATTATAGAGGCACTT
AGACATCTCCGATTTAATTTTTTTTTTTGTGGAATTCTACATGTTTTTTG
GGTTGAACCCAATTTTTGGGTCAAACAGCTGACTTTTAACACTAAAGCAT
GCGGCGTGAAAATAAAACGTATTCGGCCGAAAAAATTCCCTTTTAAGGGA
CTTTGTGTATTGTTCCACAAGTTCAGTATGTCGTGATTAGAGAAGTACTT
GAACCATCCTTTGTTTTTTGTTGAATCCTACACATTTTTGGGGTCGAACG
CCACAAAGTTGAGTCAAATAGTTGGTTTTTTAACATCAAAATACGAAAAT
ACTGGTCGTGAAAAAAACACTCGGCTGAAAAATGTCCAAAAGGGCACTTT
TTTCGAGTTCTTTGCAGGGGGGAGGGGCGGGGTGGCGTTTTTTCGGCCGA
GTCCTTTTTTTTACGGCACGTGTTTTGGTGTTAAAAGTCAACCGCTTAAC
CCAAAACTTTGGGTTTCAACCTAAAAAACATGTCGAGTTCCGGTTAAAAA
TAGTCATGAATCAGAGATGTTTTAAGTGTCTCTGCGATAATAACTTAGTG
TACTTGTGAGACAAACGAATAAACTATTCCAGTTTTTTGTTGACATTGTT
GCCGCTCTCAAGACACCTCTATTATGATATTGATGAAATGAAGAACGAAC
TTATTTTGGAGAACGAGCTCCATATATTTTGGTCCATGCCATCGATTTTC
CCGCCTGTTGTAGTTTCCGGCTAACATGGCCGATTCGGTTGGTTGATAGC
TCAATCAAAAGCTTTCAGCCACCCCATGACGTCAACACCTCAAGTGACTG
AATCCGATACATGCTCGGAATTTATGGCAGTGACAGAATGAGCGGGAAAT
TGATTAATCCCTTCGGCGCGGAATTTTTTAGTGGGTGCTCTTGCTTGGAG
CAGCCAAGGCAGGCTTTTCAATCTTCTGTCACTCGCCACCGAGACTACCG
GTGACCGTACAGCAAGTATCCGCATGCTTTCATGAGTAAGGCGGTTTGTT
TGAGCCGCTGCACGCAGTCTGACTTGTCGAAATGAGCGCGCTAGAAAGCG
TCGCGTAAAAAAAAAGTATGGATTTCAGGCTCATTCTCCAAGAAAGAATT
CGTTCTTCGTTTCACAAAAATCATATTGTCTCAAGACACAACTATCGTGC
GTGAGTGTTTTCCATTGTGCGTAGAAACACACAGAAAACAATCAAACAGA
CACTAGAGTGTTGGGAAACAATATGTAGTTTACAAAATCTTGTAGGTAGT
CTTGCAGTGGCAGCGCGTCGCTCACTGGCTCAGTCCAAACTCCTTGAACG
TGCATGTGTCCCAGATCTACCCATGCGTGGCTGAGACAGCCTCGCGACTC
ATCACTCCAGGAGGGCCGCGGCACAAATGCCCGTTTTAATACAGAGTGGT
TCAAGTTTTGCATGAGGAATTTATTTTCATCGCTTAGAATTTTTGTTGTG
TGTATACTTTTCGGTTTGCTAACGACCACTGCCCAGACGTTGTGCACGTC
TTGCTGGGGTGATGAGCTGCAGCGCCGTCTCAGCCGCACGTGAGCAGAAC
TTGGACCCTACGTTGGAAGAGGGTTCAAACTCGGCCAGTTAGCGACGGCG
CTGCCACTGCACGACTATCTAAAATATTTAGTAAATTATGCTTGTTTCGC
AAACACTCGATTGTTGGTTGTGCTGCGTTACACGTTCCCACTGAACAACC
TGTCGTGCTCACCGTTGGCAGTCAGCAGCACAGTACAGTTGGTATAGACT
TACCCCAGCGATAACTCATCGTAGGCGCAGTAACGAGGTATCGCCCTTTC
GATGTCGTTATAACGCAAGAGACGACCCTTGCCGCGAGATCAAGAAAACC
ATCCCTCCTTCACGTTGCAAGCAACCCGATGCTGTTCGAAGTTACACGGA
GAAGGGGTATGTATCGCTCTATCATTGCGCAACAAATTCCGACGCAACTC
GACACACGCTTTGATCATAAAAGCCGGCCTTGTGATCGTTACTAGCTGCT
GATTCATGTTTCAAGATCATGAGTATGCTGACAGTCCCTTCACAGCGCTG
TCCCTTGCCTAAAACTCGAAGGATAAAATATGGCGAGGCCATCGGCATCG
CTCTTGCCACACAAGTCTCCAGCCACCCAGCGATGGCGTGTTTGAATGGT
ACTGTCTGTGCTCTCTCATGGCCAGCCGTAGTTTCGGAACCATGTGATTT
ACAATAGGCGGATTATCAGCCACTATATCCACCGAAAACGTTGATGGTCG
TCCTTCAGACGTGGGTTTCACGACGACGGCGGTATCTCCCGCAAAATCAA
GCGAGACTTCCGTGCATCATGTTGCAAACAGCACAGTACAGGCCAAAGTG
TTCGCCGATAGAGTGTACAGTATGTGTCGCTGTGTGTGTGCGCCAAAATC
GAAACCAAAAATCGAAACGGTGAGTTATATATATATAGGGGTGTCCTCGG
TAATGGTATTCAGTAAGTTAAAAAATGGTCCAGTAGATGAGTTCCTCAGT
ATCATGTCGATAAACGGTACCGTACGGTACGGTATGTAGATTTCTCGGTA
TTCGCGCGGTAAGCGATATTCGATTTTTTCTCTCCGCGGTACAGTACAGC
ATTTTGCCTTCTCGGTATCATACGGTACAGTATCTATTTGATATTTGACA
CAGTATTTGAATGCCCCAAGCCTTGCCCAAGCGCAAGGTACAAGATACAG
CTATGAAACCCAGTGCATCTAGTAAACGGTATGTACGGGGAATTTTACAA
GGAGGCGATTCATCTATTCCCAGAGCCCGTTCCAACGACTCGTTAAGTTC
GTAGTTTGGAGGCGAAATACTGCCGAACACCGTACAACTCTTGAGTTGAC
TACAATCTCCCCCTCGTCCGCCGTGGTCGGGATGTGATGCACATCTAGAC
GCATGATCGTCGCAAGAAAAACAAAACGAAGAACAAAAAAAATTAGGGCA
AACTTGTTGAAAAGTACTGTGTTGTTTGCACTAGACAACGCGCTGAACTA
CGTTTACGAGAACACGCGGTGATAGCTAAAGAAATAAAGCATAAAAAAAA
TTAACCGCCAGCCATTCTGGGAAGTGAGAACCACTGTTTCCCTAGCAGGG
TTGGCGGCAGCACCGCCACCAGCTCGCGAGAAGGCAGAGATGGTCGCAGA
GCCTGCACCAACAGCAGCCCAAGGGGCAGCAGTGATGGCTGTAGAGCCTG
TGTAACCACCAGTTCGCGAGGCAGCAATGGCGGAAGAGTCAGCAGCGTTC
GAGCTGCCTTGACCAGCAACTGCCGCGATCAGAAAACACCTGTGCCCAAG
CCTATGCTGTAGGCAGATGTCTGACCAGTAGCAAGTCTGTGAATAATGAC
ACAATGGTTTTACGGTACACTAGAACATCTAGCCGGATTCAATCAGACCC
GCGGTCACTTCTTTTGGCGAATCCATTATCTCAGACCCGTGGTCATGAAC
ATTTTTCACGGTACGGTACTGGAACGGTTATGGGGGTTCACCATATATGG
AAACGGAAAATGGCTCTGACACCGCGGTAATCACGTTTCGCTGTGCCGTG
CACGGTAGCGGTCAAGGGGGAATCGATTTTTTCACGATATCGGTACCGAA
TACTGCGCATCACCGAATATTTTTGCCTCGGTATTAATACCGAGAACACC
ACTGGTAATAAATATAGAATTTTGCTACTCTTCGACATCACTTGTACCTC
TGTCGGCAGTGCGAGTCATCGTCATGGACGGAAAGGTAACAGCCGATTGC
AGAAGTTTAGGACAGCTTTCGTCTTGGATGAAAATGTTTCGGTCAATGAC
TCCGGAATATCTCTCATCGCAAGGGCCGAGGGGCGTGAGCACTTGTTCTC
TTGAATACGTTTCGAACGCACCTACTTTGGATAAATTTGGAGTAGTAGAT
CTCGAGATGTGGATCCTAAAGACGAAAGCAATCATAAGTTACTATAGGTG
TTCATGAGAACGCCTATGCTTCGCGAGCCGGCCAACAAGGCTTGACTTCC
TTCGTGCTGCCCTTGGACATTCCACTGTGTTAATTTACTGTGCTGTCGCG
ACTTGAATTGTTGCACATCATTACAGGTGGCGACGTGCCCTCCCGATGAC
GACAGGCAGCAGATGGCCGTGTTCCGTGACCCGCGGCCAATGGCCGTTTC
AACGTACTATTCCTTGGTGAAGTTCAAAATGCTGAGAACTCAGGAGACAG
TCGACGAGTATGTCACACGGGTGCTCCCGACGCTTTGCCAATGGATAGCC
GTTCGGCACATCTTGTTCGAAGGTTTCATGGCCGACCAATCAGACGTGAG
TGAAAGTAGTCAATGTGTCGTTTGCTCTTGAAGCTAATAGCGCATGCTCT
CCCCGCAATAGTGGCGGTCGCTATTGGTTATTAGTGGGACTCGAAACGCT
AGGGACTCATTTCCCTATCCTGTTTTGTTTATAATTCACGAGGCCAAATT
CACATGACACGCACTTGATTATGTCGTCTAATCCCCCTGTGAGGTGTCCA
TGTATTTGCATCGTTTTTGCGACCAAAACGATGCAGAAGGCACAGCTTTT
AGAGACAACACAGAGCAAAGCGAGGCAAACCTTTCATACCGGATCATGGC
AATTTAACAGATGTAAGACGTTCGCTGAGAGCCTAGAAAGAGATACCATG
TGCGTCTGTGTGCCTGTCTCCTGCTTTTTCCGCTGGTTCCAACACTTGAA
GTGCTACACTCAACGACATGCTAGTGGTCACAATTTGGCCACAACATCAG
TAGTTCATCGCAACATCCCTTTTCTTTTAAAGACCTGCTGCTCGGTGCGC
GAAATTTTCACGACGAAAAAGGTACTCGTGTGGATAATATAAGGGTAAAC
ATGCCTACTAAGATAGGGGTCATCCTACGGTAGGGGGGGGGGAGGGTTGA
GCCGCTTTGTTTAACAAAGAAACCGCTTTGAGAAGGGGATCGGACATTTG
TTGTTTGTTGTTTTTGCACTTGTTGCCCCCCCTTCAGTAGAAATCCAATT
TCAACTCGTGGACTGTGCACCTTCAGGGACGCACGAACAGATGCAATCGA
CACGATTTTAATTCGCGTTTTTTTTTGCACCGCTTTAGTGAAGCGGCCTT
CGTTGAATAATTGCCCCCCCCCCCCTTCAACCGTAGGATGATACCCACAC
CTCCAATTGAGATACACCATTTTAGTATCGTCCATAAGTTCGCGAAAACT
TGGTCGTTTTCCATATTGGTTATACGGAATTGGTCACAGGAGCAAGATGC
ACCACTCGAGCTACTTAGCACGCTATAACGTTTCACCAGTGTCGAGAAAC
GTCACCACACGCGAGCCCTCTCTCATAATCTTGAGGAACAGGCAAAGATC
GGCTCCAAAAGTAGGGATGAAGACAGACAGAATAGACGCAGAACTTACGA
TGCAGGCGCTTTGATGACTTGGTTTAGTTGATTTAGAAGCGCATCAACGG
TGGAGTGAGGATAGATGGTAGGACCCGTCCAGGTGCTGTACTGACGCCAG
AGGAAGAAAGTCCTAATCAAGGTGCGGCAAAACGGATGTAGATATACCGT
TGCGTTACTGTCCATACCGTCATAAAGACGTCACCATTTTCCTTATTGAA
ACAATTCCACTGGGGTCGAAAAAAGACCCCTCACGAGCTTTACCTCGCAT
CTTCAAGGTAACACAAAAATTGACAACAGAAAAGGGATGAACAGAACCAA
GGTGGATGCAGGATTTGCGGAACAGGCTGTTGATGCTGTGTGCAGCAATC
GGATGAGCTACCTCAGTGCTTCGCACGGATTTGGGGTATCAGTTGGGTTG
ATCCAGAAACGCCTCAACGAGTCTGTGAGCATGGATGGCAGGGTCGGTCC
AAGTACTGTCCTGACACCGGAGGACGAACATTGTCTTGAGAACAACTTGA
AATGGGCTGCTCGACGACAGCTGGGCGTGGGCAGAGGAAATCTGATGCAA
GCAATGGTAGCAATCTGAAGCGACGTTCGATTTGTTCCGTGGGACAGAGC
CCAAAGCCTCGGCCGAAGGTGGGTCGTTGGCTTCTAATTCGACCGGGTGA
CCGGCAATCCTTGGCGGACTCGCGTGTGGTGGTAAGCGAGAATGACCTCG
ATGGCCAAACGATTACTGGACTTCGGGTCAGCGTCATGTTAGGTGACTTC
CTGAAGATGCAGGAGCGCAAAACACCCTCACCAGCGACCTCTAGACTCAT
ATCGGGAATCACCAAAAGAGGACTTCTCACAAGGGAGGTCCTGGAAATAT
ACGAAGAGGATGAACGCCAAAATAAGAAAGACGAGGGTGAGAAGGCACAA
CGTATCGCTGCCTGGGTTGCCAGGCAGGCGGCGAAGGAGGGTGCTGCTGC
CGCGCCGCTAGGGGCAGGGGTTATGGTGGTTCAAGGGGGAATGAGCGATG
CGGTGGGCGAGGGGTGGCTGTGAGAGGAGGTGTGCCGTTGGGCGGCTGGC
TCAGGCGGTGGAAGCATATCGTCAACTACAGTACATGGGTGTGAGGCAGC
GAGTACAGTGGGCGGGGTGGGGCGGCTGCCTGACTAGGTAAAAGCGTGTC
GTTGACGGCAGTAGATGGTCGTACTTGAGGTCTGCCGTTGCCTCCGTCGA
AACGCACACGAGGCGCCACTTCTACAGCATCTACCGGAGCACCGGTAGCA
CCTATTGATTGGCTGGTCTTCTGATCAATGTGTTCTCGGTGGGGGCCTTG
AGTAAGTCTCGTCCCTTGGATCCATCGTGAGCACGGATTGTGTCTGCGTA
CTGCGTTTGCGTACTGCGTCGGCTGTTTTTCGTGTTTTTCCATGATTTTG
GCTCGAAAACAGGTTCGGGGTGGACACTGGATTGCGTAGAAAAGTGACTT
ATTCAGCTTCAATGATTACGAACTTTTGGGGTGGGTCTTGCAATAGTAAT
AAAAAATGTTGAAAAAAGAAAAAAACAGCTCCCCGCCGAGGTCGGCGGGG
TCAATGCTCACTTGTGTGTTAACTCGTTCCGAAAATACGGGGATACAGTT
CGTACACCCCCGGAATAACACATTTTTTGTTCTTAGGGTTAGGGTTAGGG
TTTTCGTAAAGTGTATCTTGATTGGTCAGGGGTATTCCACTGCATGCGTT
CTTATTAATTTTGCGTTTTTCGAAGCCTGCACGATGGCTGATGAAAATAT
CTACCTCCTGATACTTCACCCATTCTTGTAATTCTCGCTGTTCTGACAAA
CCATTAATTTGCGTGTGAGGTTCCTTAGGTATATCTTACTTGACACGTTT
ACCTATAACTACAACACGTCAGTACTGAGGTTGTCGGCTGCGTTTTTTTT
CTGGCTCAATACTATTTTTCATAATATACGTACCACATGTTTTGGTCATG
CTCTCTAGGCCCTCGATGTAAAAGTGCTACACTTAAAATTGATCCTCCTT
GAGCACTTACCTATCCGTCAAAAAGATGTATTCCAAAGAGAGTATTGAAT
ATAAAGAAGTGATGAGTTGTTCCTTTGCTCTACTGTATTGTAATACACCC
CCTGACGCTCTTCGAAACAGCGGGGTTCTTCTGCGATGGAGTTAGCCTGC
CGCAGGTATTGGATTGGTTCCATGTGATCAACAGTTCTACCACCTTTTCG
TTAACGTCCCATGATCGGATCAAGTTTATCATATACGTGTTGGATTTCAG
CCCCAGCATAGCACCCTTAACCCCCCCCCCCCCACACACACACAGTTCTG
ACGATGAAAGATGGTGGAAGTCGGTGAAGCGCCCGTATTGTGCTCTTGAG
GTGCATCACCCCAACCCCCGTTCTGCCGCAAACTCTACCACCCCGACAGG
TGTACTGGTACGAGGACGCGCTGGACGACCCACTTTCATGGCACTTCGAA
TGGTTAGCTTCGGTGGGCCTTCATATTCCACCTAAGGTGGTGGAAGGCGC
CGCATCTGCTGCAGCACGACATGACTTCGTTTTCCTGACTAAGGGTGTTG
ACAGGCACCCGGGAGGAGTCACCTTACGCAGATCGTACAAGGATGAGATC
ACCGCGGAAACGCTGTCGGGGTTTGATGCCGTTTTAAGGACATGGCTGCC
GCCGATCGTGTTGGCTAGGCTGGGCGTGGCGCCTGCGTAGTACCTCGACG
GACTGAGTGTTATCCGACTAAAAAACATCCCACGATCAAGACTTGCGTAC
CTGCGTGATAGGCTGTGCAAGACATCTGATTAGAAAACGAACGAGCGCTT
TTTCTGATTAAATGTGATTTCCAACAGATACTTTCCGAACATTTTTTCGT
ATTCGTCTCTCTTGTTCTCCGAAGATTGATGTACTAAAATGGTCCAAAGT
TTTTCCGATGGTGGAGCTACTAATTTTGAAACTAACAGCCGCGAAGGTTT
TACTGTGAAGGAGGTGTTGAGGTGAACGGCGTGGACTTCCCCGTTGGGGT
AGAAACTATAGGTTCAGGGATGTGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3888:1234..12809- >mRNA_H-paniculata_contig3888.10143.1 ID=mRNA_H-paniculata_contig3888.10143.1|Name=mRNA_H-paniculata_contig3888.10143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig3888:1234..12809- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAAAGATGGAAAAGGTGGCGACGTGCCCTCCCGATGACGACAGGCA
GCAGATGGCCGTGTTCCGTGACCCGCGGCCAATGGCCGTTTCAACGTACT
ATTCCTTGGTGAAGTTCAAAATGCTGAGAACTCAGGAGACAGTCGACGAG
TATGTCACACGGGTGCTCCCGACGCTTTGCCAATGGATAGCCGTTCGGCA
CATCTTGTTCGAAGGTTTCATGGCCGACCAATCAGACGTGGCGACGTGCC
CTCCCGATGACGACAGGCAGCAGATGGCCGTGTTCCGTGACCCGCGGCCA
ATGGCCGTTTCAACGTACTATTCCTTGGTGAAGTTCAAAATGCTGAGAAC
TCAGGAGACAGTCGACGAGTATGTCACACGGGTGCTCCCGACGCTTTGCC
AATGGATAGCCGTTCGGCACATCTTGTTCGAAGGTTTCATGGCCGACCAA
TCAGACGTGTACTGGTACGAGGACGCGCTGGACGACCCACTTTCATGGCA
CTTCGAATGGTTAGCTTCGGTGGGCCTTCATATTCCACCTAAGGTGGTGG
AAGGCGCCGCATCTGCTGCAGCACGACATGACTTCGTTTTCCTGACTAAG
GGTGTTGACAGGCACCCGGGAGGAGTCACCTTACGCAGATCGTACAAGGA
TGAGATCACCGCGGAAACGCTGTCGGGGTTTGATGCCGTTTTAAGGACAT
GGCTGCCGCCGATCGTGTTGGCTAGGCTGGGCGTGGCGCCTGCGTAGGTG
TACTGGTACGAGGACGCGCTGGACGACCCACTTTCATGGCACTTCGAATG
GTTAGCTTCGGTGGGCCTTCATATTCCACCTAAGGTGGTGGAAGGCGCCG
CATCTGCTGCAGCACGACATGACTTCGTTTTCCTGACTAAGGGTGTTGAC
AGGCACCCGGGAGGAGTCACCTTACGCAGATCGTACAAGGATGAGATCAC
CGCGGAAACGCTGTCGGGGTTTGATGCCGTTTTAAGGACATGGCTGCCGC
CGATCGTGTTGGCTAGGCTGGGCGTGGCGCCTGCGTAG back to top
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