mRNA_H-paniculata_contig3887.10142.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A6H5KNT2_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT2_9PHAE) HSP 1 Score: 318 bits (815), Expect = 1.720e-104 Identity = 167/258 (64.73%), Postives = 194/258 (75.19%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEMVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQP-----------GRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEERHGPFAG 741
MGGVPSVLL LWCRGGCSTATVAAALTFFPP PPCY+L++KEGS+ELEMVVDE+LE+TA+TE V+IA IVSG + SR +P G+ N + G G + + +GS IP+AL+R AR+TLIYSHGNATDIGAMHDRC GIA+A+GVNVL+YDYTGYG ASGSPTEA+TYRDIEAVC WAR NVL+EGEDGSG+NKGHGLILYGQSVGSGPTC+LAS++ G FAG
Sbjct: 1 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYSLKRKEGSEELEMVVDEVLEATATTEGVEIATIVSG---VSGSRCGEPVLAAVANPKPKGKRNSKAAGXXXXXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLIYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGSFAG 255
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: D7G4Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z1_ECTSI) HSP 1 Score: 231 bits (588), Expect = 1.110e-72 Identity = 124/204 (60.78%), Postives = 148/204 (72.55%), Query Frame = 1
Query: 145 MVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQP-----GRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEERHGPFAG 741
MVVDE+LE+TA+TE V+IA IVSG + S+ +P N + K S G + + +GS IP+AL+R AR+TL+YSHGNATDIGAMHDRC GIA+A+GVNVL+YDYTGYG ASGSPTEA+TYRDIEAVC WAR NVL+EGEDGSG+NKGHGLILYGQSVGSGPTC+LAS++ GPFAG
Sbjct: 1 MVVDEVLEATATTEGVEIATIVSG---VSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAG 201
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A7S2XWM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM1_9STRA) HSP 1 Score: 144 bits (364), Expect = 6.690e-40 Identity = 92/230 (40.00%), Postives = 117/230 (50.87%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDE-LEMVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVG 687
MGGVP LL WC+GGCSTA VA ALTFFPP P YTLQK + E L V E L+ ++V+ ++ + RRK IP+ L+R A++TLI+SHGNATD+GAMHDR VG+A +L +N++ YDYTGYG + + TE TY D+EAV W NV + E +ILYGQSVG
Sbjct: 1 MGGVPGTLLCFWCKGGCSTAKVAGALTFFPP-EPHYTLQKDPNNPERLIFRVHEDLQPLPF-DNVEAQIVTTRRRKN---------------------------------------------------IPVVLYRYRNAKYTLIFSHGNATDLGAMHDRFVGLAMSLQINIVGYDYTGYGHSHDTCTEGDTYADLEAVFDWVVKNVAPQPETS--------VILYGQSVG 169
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A1V9ZDL9_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDL9_9STRA) HSP 1 Score: 132 bits (333), Expect = 7.960e-34 Identity = 88/245 (35.92%), Postives = 119/245 (48.57%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKK----EGSDELEMVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEER 723
MGGV L +LW R G S+ATVAAALTF+PP P YTL+K + ++ + V + E + ++ M+ + G+ IP + R A FTLI+SHGNATD GAM+ R + ++ L VNV++YDY+GYG A+G PTEA TY DI A+ + L E H +ILYGQSVGSGP+ +LAS+E
Sbjct: 1 MGGVAGTLFVLWVRSGFSSATVAAALTFYPPLPT-YTLEKDASTAKNANPMYNVTHFIAEHSRLAGAARVYMVPTS---------------------------------------------------PGNEIPCFVFRYPEAEFTLIFSHGNATDCGAMYSRYLALSRELSVNVVAYDYSGYGAATGRPTEANTYTDITAILDFC-IKQLGYAE--------HKIILYGQSVGSGPSIYLASKEH 184
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A024U6Q3_9STRA (Hydrolase_4 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6Q3_9STRA) HSP 1 Score: 132 bits (332), Expect = 9.300e-34 Identity = 87/241 (36.10%), Postives = 118/241 (48.96%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEMVVDELL--ESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASE 717
MGGV L +LW R G S+ATVA+ALTFFPP P +++ +G+ ++ +D + STAS +A++ R +G IP + R A FT+IYSHGNATD G M R + ++ L VNV+ YDYTGYG ASGSP+EA TY DI A+ A++ + +ILYGQSVGSGP+ +LA+E
Sbjct: 1 MGGVAGSLFMLWVRSGFSSATVASALTFFPPSPTYGLVKQADGATAVDHYIDANVPFSSTAS-----LAVV---------------------------------------------------RTKRGQEIPCFVFRHPEATFTMIYSHGNATDCGGMFLRYLSLSRELKVNVVGYDYTGYGGASGSPSEADTYADITAIYDHVVAHICTSSDPAKE------IILYGQSVGSGPSIYLATE 179
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A6S9I0E5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I0E5_HETAK) HSP 1 Score: 132 bits (332), Expect = 1.370e-33 Identity = 69/126 (54.76%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 379 VIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSP-TEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEER------HGPF 735
VI L+R EGA T++YSHGNATD+GAMHDR VG+A L VNVL+YDYTGYG +SG TE TY DIEA C W N+ N LILYGQSVGSGP+C+ AS H PF
Sbjct: 75 VITAVLYRAEGASKTIVYSHGNATDLGAMHDRYVGLATILKVNVLAYDYTGYGQSSGDMCTEPDTYADIEAACQWVIENISS--------NPAEDLILYGQSVGSGPSCYYASRHAAAGVILHSPF 192
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A1W0AB71_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB71_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.570e-33 Identity = 87/245 (35.51%), Postives = 121/245 (49.39%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEM----VVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEER 723
MGGV L +LW R G S ATVAAALTF+PP P YTL+K + + + V + E+T ++ M+ P+R G+ +P + R A FT+++SHGNATD GAM R V ++ L VNV++YDY+GYG A+G PTEA TY DIEA+ +A ++ + +ILYGQSVGSGP+ +LA++E
Sbjct: 1 MGGVAGTLFVLWVRSGFSAATVAAALTFYPPLPT-YTLEKDPNTAKHDYPQYNVKHFIAENTKLAGAARVYMV--------PTR-------------------------------------------VGNEVPCFVFRYPEAEFTIVFSHGNATDCGAMFSRYVSLSRELSVNVVAYDYSGYGGATGRPTEANTYCDIEAIFEFATKHLGYAADS---------IILYGQSVGSGPSVYLAAKEH 184
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A067CL46_SAPPC (Hydrolase_4 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CL46_SAPPC) HSP 1 Score: 131 bits (330), Expect = 2.210e-33 Identity = 85/240 (35.42%), Postives = 119/240 (49.58%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEMVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEE 720
MGGV L +LW R G S+ATVAAALTF+PP YTL+K + + + + A+ ++ + R + P+R G+ +P + R A FTLI+SHGNATD GAM+ R + ++ L VNV++YDY+GYG A+G P EA TY DI AV + ++ R H +ILYGQSVGSGP+ +LA++E
Sbjct: 1 MGGVAGTLFVLWVRSGFSSATVAAALTFYPPLST-YTLEKDAATAKEAYPLYNVTHFVAA----HARLVAAARVFMVPTR-------------------------------------------PGNEVPCFVFRYPEAEFTLIFSHGNATDCGAMYSRYIALSRELAVNVVAYDYSGYGAATGRPNEANTYTDITAVFDFCVQHL---------RYPAHKIILYGQSVGSGPSIYLAAKE 183
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: W4HAD8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAD8_9STRA) HSP 1 Score: 130 bits (326), Expect = 6.670e-33 Identity = 83/239 (34.73%), Postives = 117/239 (48.95%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEMVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASE 717
MGGV L +LW R G S+ATVA+ALTFFPP P ++ +G+ ++D + ++ + +A++ R G IP + R A+FT+IYSHGNATD GAM+ R + ++ L VNV+ YDY+GYG A+G+P+EA TY DI AV A+V + +ILYGQSVGSGP+ +LA+E
Sbjct: 1 MGGVAGSLFMLWVRSGFSSATVASALTFFPPSPTYSLVKNADGTTSAVHIIDANIPFASA---MTVAVV---------------------------------------------------RTKLGQDIPCFVCRHPDAKFTIIYSHGNATDCGAMYLRYISLSRELKVNVVGYDYSGYGGATGTPSEANTYADIIAVYDHVLAHVCPSPQQ---------VILYGQSVGSGPSIYLAAE 176
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Match: A0A6G0XWZ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWZ8_9STRA) HSP 1 Score: 130 bits (326), Expect = 6.990e-33 Identity = 86/240 (35.83%), Postives = 118/240 (49.17%), Query Frame = 1
Query: 1 MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEMVVDELLESTASTEDVQIAMIVSGRRKIKPSRRRQPGRGNGRNKGGSCPASAGRSCAGCSRCSGSSHASQKPRKAKGSVIPLALHRREGARFTLIYSHGNATDIGAMHDRCVGIADALGVNVLSYDYTGYGMASGSPTEAKTYRDIEAVCTWARANVLREGEDGSGRNKGHGLILYGQSVGSGPTCFLASEE 720
MGGV L +LW R G S+ATVAAALTFFPP P Y +++ E SD + + E+ ++ M+ R +G+ IP + A+FTLI SHGNATD GAM+ R + ++ L VN++ YDY+GYG ASG+P+EA TY DI AV + + N+ + +ILYGQSVGSGP+ FLAS++
Sbjct: 1 MGGVVGSLFMLWVRSGFSSATVAAALTFFPP-EPTYIIERDE-SDTNCKIHHLINENERHKSAAKVIMV---------------------------------------------------RTKQGNEIPCFVFTYPEAKFTLILSHGNATDCGAMYLRYLSLSRELKVNLVGYDYSGYGGASGTPSEANTYADITAVYNYVKENMSSD--------PAQDIILYGQSVGSGPSIFLASQQ 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3887.10142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3887.10142.1 >prot_H-paniculata_contig3887.10142.1 ID=prot_H-paniculata_contig3887.10142.1|Name=mRNA_H-paniculata_contig3887.10142.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp MGGVPSVLLLLWCRGGCSTATVAAALTFFPPCPPCYTLQKKEGSDELEMVback to top mRNA from alignment at H-paniculata_contig3887:5063..16258+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3887.10142.1 ID=mRNA_H-paniculata_contig3887.10142.1|Name=mRNA_H-paniculata_contig3887.10142.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11196bp|location=Sequence derived from alignment at H-paniculata_contig3887:5063..16258+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3887:5063..16258+ >mRNA_H-paniculata_contig3887.10142.1 ID=mRNA_H-paniculata_contig3887.10142.1|Name=mRNA_H-paniculata_contig3887.10142.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at H-paniculata_contig3887:5063..16258+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |