prot_H-paniculata_contig38867.10141.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38867.10141.1
Unique Nameprot_H-paniculata_contig38867.10141.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
[Close]
BLAST of mRNA_H-paniculata_contig38867.10141.1 vs. uniprot
Match: A0A6H5JML5_9PHAE (DDHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JML5_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-10
Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:    9 QVHGDEAVEDGLIRDITLPSLIQFRDFASQAIMDVMYYLTP 49
            +VHG+EA  +G+I+DIT  S+  FRDFASQAIMDVMYYLTP
Sbjct:  333 EVHGNEAAAEGMIQDITFDSIPGFRDFASQAIMDVMYYLTP 373
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38867.10141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JML5_9PHAE1.090e-1070.73DDHD domain-containing protein n=2 Tax=Ectocarpus ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38867contigH-paniculata_contig38867:728..886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38867.10141.1mRNA_H-paniculata_contig38867.10141.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38867 728..886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38867.10141.1 ID=prot_H-paniculata_contig38867.10141.1|Name=mRNA_H-paniculata_contig38867.10141.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
FVVCVKKLQVHGDEAVEDGLIRDITLPSLIQFRDFASQAIMDVMYYLTPR
YH*
back to top