mRNA_H-paniculata_contig3882.10134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: D8LHP4_ECTSI (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHP4_ECTSI) HSP 1 Score: 148 bits (373), Expect = 6.440e-39 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1
Query: 292 KEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGLQPGVR 531
KEIPF TVVTDLGSAHPTWFDPRGDL YVPSDVL+ RARARGIPQHKL+QFGLPVRDAFW + +DK+ VQ+RLGL+ GVR
Sbjct: 276 KEIPFATVVTDLGSAHPTWFDPRGDLTYVPSDVLRERARARGIPQHKLMQFGLPVRDAFWEESSDKQAVQQRLGLKAGVR 355
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: A0A6H5JWH3_9PHAE (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH3_9PHAE) HSP 1 Score: 147 bits (371), Expect = 2.250e-38 Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 1
Query: 292 KEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGLQPGVR 531
KEIPF TVVTDLGSAHPTWFDPRGDL YVPSDVL+ RARARGIPQHKL+QFGLPVRDAFW +DK VQ+RLGLQ GVR
Sbjct: 297 KEIPFATVVTDLGSAHPTWFDPRGDLTYVPSDVLRERARARGIPQHKLMQFGLPVRDAFWEASSDKHAVQQRLGLQAGVR 376
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: A0A7S3XQR2_HETAK (Monogalactosyldiacylglycerol synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQR2_HETAK) HSP 1 Score: 100 bits (249), Expect = 1.760e-21 Identity = 43/79 (54.43%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 292 KEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGLQPGV 528
+ +PFVTV TDLG AHPTWF P D VY+PS ++R A G+P KL + GLP+R AFWN D+K VQ +L +Q GV
Sbjct: 264 RAVPFVTVCTDLGGAHPTWFSPEADRVYIPSAPIRRMAFREGVPAPKLRELGLPIRPAFWNSGEDQKKVQGKLAMQRGV 342
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: A0A7S2H2E3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2H2E3_9DINO) HSP 1 Score: 89.7 bits (221), Expect = 3.520e-20 Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 280 RMNSKEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWN-DPADKKTVQKRLGLQPGVR 531
R + IPFVTVVTDLG AHP WF P D V+VPS+ L++ A G+ +H L +GLP+R FWN +P K V++ L L P R
Sbjct: 1 RRARRRIPFVTVVTDLGGAHPMWFHPEADRVFVPSENLRKLALQCGVREHSLYMYGLPLRRDFWNPEPRPKVLVREALDLDPKAR 85
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: B5YN68_THAPS (Monogalactosyldiacylglycerol synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN68_THAPS) HSP 1 Score: 95.1 bits (235), Expect = 8.340e-20 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 271 GTVRMNSKEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGL 516
G R + PFVTVVTDLG AHPTWF+ D +VPSDVLK A R + +HK++Q+GLP+R FW K T++++LGL
Sbjct: 137 GASRKEGRTTPFVTVVTDLGGAHPTWFNDGVDKCFVPSDVLKNAALDRSVKEHKIVQYGLPIRRGFWRFVHHKPTIREQLGL 218
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: W7TN13_9STRA (Monogalactosyldiacylglycerol synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN13_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 2.280e-19 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 262 RIDGTVRMNSKEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGLQPGVR 531
R+ T+ ++IPFVTVVTDLG AHPTWF DL +VPSD +++ A A G+ ++ Q GLP+R FW DK +++ LGL GVR
Sbjct: 366 RVLNTLGRGKRQIPFVTVVTDLGGAHPTWFHKEVDLCFVPSDPVRKIALAMGLKHDQIRQHGLPIRPGFWKAGKDKGQLRRELGLATGVR 455
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: A0A8J2WFQ1_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WFQ1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 4.250e-19 Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 262 RIDGTVRMNSKEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKK---TVQKRLGLQPGV 528
+IDG S++ PFVTVVTDLGSAH TWFD RGD +VPSD L++ A G+P K+++ GLP+R+ FW+ +K + +LGL GV
Sbjct: 199 KIDG----GSRKTPFVTVVTDLGSAHNTWFDGRGDYTFVPSDALEKMASRCGVPDDKIIKRGLPLREGFWDLAGSEKIKEATRNKLGLTTGV 286
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: A0A835Z2I2_9STRA (Monogalactosyldiacylglycerol synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I2_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.190e-18 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 292 KEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPA-DKKTVQKRLGLQPGVR 531
++IPFVTVVTDLG AHPTWF P D +VPS+VL+ A +G+ ++ GLP R FW DK ++Q +LGLQPGV+
Sbjct: 123 RKIPFVTVVTDLGGAHPTWFHPDTDKCFVPSEVLRETALTQGLRPEQIKLHGLPTRPGFWKPVTQDKASLQVQLGLQPGVK 203
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: A0A2V3IX18_9FLOR (Monogalactosyldiacylglycerol synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX18_9FLOR) HSP 1 Score: 91.7 bits (226), Expect = 2.320e-18 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 301 PFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGL 516
PFVTVVTDLG AHPTWFDPR D+VYVPS+ L + A +P+ ++ FGLP+R AFW + ++ LG+
Sbjct: 200 PFVTVVTDLGGAHPTWFDPRADMVYVPSEPLHQAALEAAVPEDRIRLFGLPIRPAFWQETRSPAQLRVELGM 271
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Match: D7FH03_ECTSI (Monogalactosyldiacylglycerol synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH03_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 2.680e-18 Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 289 SKEIPFVTVVTDLGSAHPTWFDPRGDLVYVPSDVLKRRARARGIPQHKLLQFGLPVRDAFWNDPADKKTVQKRLGLQPGVR 531
++EIPFVTVVTDLG AHPTWF D +VPSD L AR G+ K+ GLP+R FW + + K +Q++LGL+PGV+
Sbjct: 370 AREIPFVTVVTDLGGAHPTWFHRDVDACFVPSDRLAVLARNCGLSPDKIRLHGLPIRPGFWGEQSAKADLQEKLGLKPGVK 450 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3882.10134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3882.10134.1 >prot_H-paniculata_contig3882.10134.1 ID=prot_H-paniculata_contig3882.10134.1|Name=mRNA_H-paniculata_contig3882.10134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp FRPVVCVVVVLPVETASKPQHMLLLLSSGVSRLSLHLSSFAVIRHLNWVDback to top mRNA from alignment at H-paniculata_contig3882:6134..8601- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3882.10134.1 ID=mRNA_H-paniculata_contig3882.10134.1|Name=mRNA_H-paniculata_contig3882.10134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2468bp|location=Sequence derived from alignment at H-paniculata_contig3882:6134..8601- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3882:6134..8601- >mRNA_H-paniculata_contig3882.10134.1 ID=mRNA_H-paniculata_contig3882.10134.1|Name=mRNA_H-paniculata_contig3882.10134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig3882:6134..8601- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |