prot_H-paniculata_contig3868.10105.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig3868.10105.1
Unique Name	prot_H-paniculata_contig3868.10105.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	209

Homology

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: D7FSF1_ECTSI (Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF1_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 4.360e-136
Identity = 196/208 (94.23%), Postives = 201/208 (96.63%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNISNAAATSDKGSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID RQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL +RRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLN +N A  +DK SCC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNYNNVAPPADKSSCC 208

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A835Z1V8_9STRA (Rab2A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V8_9STRA)

HSP 1 Score: 361 bits (926), Expect = 3.340e-125
Identity = 182/200 (91.00%), Postives = 189/200 (94.50%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNISNAAA 200
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQP+HDLTIGVEFGARMIN+D RQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDL +RRAV+TKEGEQFA ENGLIFLETSAK A NVE AFI+TA KIY NI SGVYDPTNEAHG+KLGPAASLN  N+AA
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPLHDLTIGVEFGARMINVDARQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAAENGLIFLETSAKTAANVEAAFIQTAEKIYGNIQSGVYDPTNEAHGVKLGPAASLNYGNSAA 200

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A7S2CHD5_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2CHD5_9STRA)

HSP 1 Score: 347 bits (889), Expect = 1.300e-119
Identity = 177/208 (85.10%), Postives = 185/208 (88.94%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNISNAAATSDKGSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+NID RQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEA+QNSN NMVIMLIGNKSDL +RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+ ILSGVYD TNEAHGIK+G        N +  S   +CC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQNSNPNMVIMLIGNKSDLDHRRAVSTKEGEQFAEENGLIFLETSAKTAANVEQAFIKTAEKIYEKILSGVYDVTNEAHGIKIGMNQHSGPDNNSGRSSNKACC 208

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A7S2V0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L3_9STRA)

HSP 1 Score: 348 bits (892), Expect = 1.400e-119
Identity = 181/210 (86.19%), Postives = 191/210 (90.95%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNISNAAAT--SDKGSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TF+HLTRWLEEARQNSNSNMVIMLIGNKSDL +RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD TNEAHGIK+G A S   + A  +  S   SCC
Sbjct:   31 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTRWLEEARQNSNSNMVIMLIGNKSDLEHRRAVSTKEGEQFAEENGLIFLETSAKTAENVEAAFIKTAEKIYENILSGVYDVTNEAHGIKVGMAGSGYSAGAGGSNASQGKSCC 240

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A6V1NY85_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NY85_HETAK)

HSP 1 Score: 336 bits (862), Expect = 1.750e-115
Identity = 175/210 (83.33%), Postives = 187/210 (89.05%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASL--NISNAAATSDKGSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID+R+IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNK+DL +RRAV+TKEGEQFAEENGLIFLETSAK A NVE AFIKTA KIY+NILSGVYD  +E+ GIK+G +     N   +A      SCC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDIDSRKIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKADLEHRRAVSTKEGEQFAEENGLIFLETSAKTAQNVEDAFIKTAEKIYENILSGVYDIQSESSGIKVGMSGGQGGNAYGSANREGSKSCC 210

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: M4B5K5_HYAAE (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=M4B5K5_HYAAE)

HSP 1 Score: 334 bits (857), Expect = 1.010e-114
Identity = 169/192 (88.02%), Postives = 178/192 (92.71%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAAS 192
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI+ +QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL +RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTA+KIY NI SGV D TNEAHGIK+G   S
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEAHGIKMGMTGS 192

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A485LBB8_9STRA (Aste57867_18783 protein n=7 Tax=Oomycota TaxID=4762 RepID=A0A485LBB8_9STRA)

HSP 1 Score: 333 bits (853), Expect = 4.270e-114
Identity = 172/211 (81.52%), Postives = 184/211 (87.20%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLN---ISNAAATSDKGSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID +QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL +RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNEAHGIK+G   S         A  ++KG CC
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAHGIKVGMTGSATPTGFGGNANNANKGGCC 211

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A024UMG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMG6_9STRA)

HSP 1 Score: 333 bits (855), Expect = 5.630e-114
Identity = 175/215 (81.40%), Postives = 187/215 (86.98%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASL-------NISNAAATSDKGSCC 208
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL +RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AFIKTA KI+ NI +G+ D TNEAHGIK+G   S        N +NA    +KG CC
Sbjct:   29 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFIKTAQKIHANIQAGICDVTNEAHGIKVGMTGSATPTGFGGNGNNA----NKGGCC 239

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A2D4BXC9_PYTIN (Rab2 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC9_PYTIN)

HSP 1 Score: 337 bits (863), Expect = 1.040e-113
Identity = 171/192 (89.06%), Postives = 178/192 (92.71%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAAS 192
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID +QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL +RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTAAKIY NI SGV D TNEAHGIK+G   S
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSYKEGEQFAKENGLIFLETSAKTAANVEDAFVKTAAKIYSNIQSGVCDVTNEAHGIKVGMTGS 192

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BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Match: A0A8J5J3E0_9STRA (SWIB/MDM2 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3E0_9STRA)

HSP 1 Score: 334 bits (856), Expect = 9.440e-111
Identity = 169/192 (88.02%), Postives = 178/192 (92.71%), Query Frame = 0

Query:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAAS 192
            MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI+ +QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM IMLIGNKSDL +RRAV+ KEGEQFA+ENGLIFLETSAK A NVE AF+KTA+KIY NI SGV D TNEAHGIK+G   S
Sbjct:    1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEAHGIKVGMTGS 192

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3868.10105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSF1_ECTSI	4.360e-136	94.23	Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835Z1V8_9STRA	3.340e-125	91.00	Rab2A, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A7S2CHD5_9STRA	1.300e-119	85.10	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A7S2V0L3_9STRA	1.400e-119	86.19	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6V1NY85_HETAK	1.750e-115	83.33	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]
M4B5K5_HYAAE	1.010e-114	88.02	Uncharacterized protein n=26 Tax=Oomycota TaxID=47...	[more]
A0A485LBB8_9STRA	4.270e-114	81.52	Aste57867_18783 protein n=7 Tax=Oomycota TaxID=476...	[more]
A0A024UMG6_9STRA	5.630e-114	81.40	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A2D4BXC9_PYTIN	1.040e-113	89.06	Rab2 family GTPase, putative n=1 Tax=Pythium insid...	[more]
A0A8J5J3E0_9STRA	9.440e-111	88.02	SWIB/MDM2 domain-containing protein n=1 Tax=Phytop...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 30..46 score: 32.76 coord: 145..167 score: 44.2 coord: 7..28 score: 51.86 coord: 48..70 score: 51.5 coord: 110..123 score: 50.42
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 4.2E-103 score: 358.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 1.0E-30 score: 118.0
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..167 e-value: 1.5E-10 score: 15.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..208 e-value: 3.2E-8 score: 43.3
None	No IPR available	GENE3D	3.40.50.300		coord: 1..208 e-value: 4.5E-66 score: 224.0
None	No IPR available	PANTHER	PTHR24073:SF990	RAS-RELATED PROTEIN RAB-2A	coord: 3..194
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..194
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..208 score: 34.915
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 1.8E-31 score: 107.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 2.1E-60 score: 203.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..177

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3868	contig	H-paniculata_contig3868:4781..16058 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3868.10105.1	mRNA_H-paniculata_contig3868.10105.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig3868 4671..16349 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig3868.10105.1 ID=prot_H-paniculata_contig3868.10105.1|Name=mRNA_H-paniculata_contig3868.10105.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI
DTRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRW
LEEARQNSNSNMVIMLIGNKSDLVNRRAVTTKEGEQFAEENGLIFLETSA
KMATNVETAFIKTAAKIYDNILSGVYDPTNEAHGIKLGPAASLNISNAAA
TSDKGSCC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase