prot_H-paniculata_contig384.10057.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig384.10057.1
Unique Nameprot_H-paniculata_contig384.10057.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length367
Homology
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 3.510e-96
Identity = 180/374 (48.13%), Postives = 224/374 (59.89%), Query Frame = 0
Query:   28 LGTLPLPLVSEIGAFSAGGFLSGACRTTLEALRELHYKVDME--VHAHSFSEAEDILCHTS---TEHMGLQADGALVTGRAVTRITIKGCGDRQDQEAGYEVLEKAIKRVVRHSIPTLRSITIKA----------RGQSCN-------------------RIAAVLDALVPLSTKQYRVASNLVRVELVDGPSGVAKAGRAIAAGLWPALEELVVARCHANAEQFKKVAQGIASGKVPNLRVLNWDRQTYHRRRPLDDVLLLALSAGKCPLIESLSFTDNRFCPEFSIFYIRQALRACPKLQELRMDCSRTPRNELVELVSALREGSAPHLASLFVRSTKAYHMSDETKPAVQALRETVQLRIPPVCVEVQIKT 367
            L  LP  ++ EI +F+    LSG CRTTL  +RELHYKVDM     A+ F       C  +   T+HMG+ A GAL TGRAV RITI    + QD       LE+AI+RVV+HSIPTLR ITI+            G SC+                      A+L  LVPLS K++RVA  L RV LVDG +GVAKAGRA+A GLWPALE L  + C ANA  F+ +A+G+ SG  P LRVL WD Q+  R   +DDV+L ALS G+CPL+E LSFT NRFCPE  I Y+ + L  CP+L+ELRMDCSRTP +EL  L  AL  G  P L  L VR+T  Y+   + +  ++AL+     R PPV +E+QIKT
Sbjct:   79 LDVLPGVVLREIVSFTTDSSLSGVCRTTLGGIRELHYKVDMAKVASAYFFGRLAAAYCSKTLELTDHMGIDASGALATGRAVVRITITHVHETQDP-----ALEQAIRRVVQHSIPTLREITIRGYPTWTGRARPSGGSCSIQYPPCARSPSAGAPHGPDAPGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAGGHVPRLERLLVRATAPYYRDSDVE--LRALKRVAASRSPPVELELQIKT 445          
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 2.700e-90
Identity = 156/286 (54.55%), Postives = 196/286 (68.53%), Query Frame = 0
Query:   89 HMGLQADGALVTGRAVTRITIKGCGDRQDQE---AGYEVLEKAIKRVVRHSIPTLRSITIKA----RGQSCNRIAAVLDALVPLSTKQYRVASNLVRVELVDGPSGVAKAGRAIAAGLWPALEELVVARCHANAEQFKKVAQGIASGKVPNLRVLNWDRQTYHRRRPLDDVLLLALSAGKCPLIESLSFTDNRFCPEFSIFYIRQALRACPKLQELRMDCSRTPRNELVELVSALREGSAPHLASLFVRSTKAYHMSDETKPAVQALRETVQLRIPPVCVEVQIKT 367
            HMGL+A GAL TGRA+ RITI    +  ++    A Y+ LE+A+ RVVRHSIPTLR ITI+      G++  R+ A+L  LVPLS K++RVA  L RV LVDG +GVAKAGRA+AAGLWPALE L  + C ANA  F+ +A+G+ SG  P LRVL WD Q+  R   +DDV+L ALS GKCPL+E LSFT NRFCPE SI Y+ +AL  CP+L+ELRMDCSRTP ++L  LV AL  G  P L  L VR+T  Y+   + +  + AL+     R PPV +E+QIKT
Sbjct:   21 HMGLEASGALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGRA--RVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVLVGALVGGHVPRLERLLVRATAPYYRDSDVE--LLALKRAAASRSPPVELELQIKT 302          
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 3.610e-87
Identity = 156/297 (52.53%), Postives = 194/297 (65.32%), Query Frame = 0
Query:   75 FSEAEDILCHTSTEHMGLQADGALVTGRAVTRITIKGCGDRQDQEAGYEVLEKAIKRVVRHSIPTLRSITIKA----RGQSCNRIAAVLDALVPLSTKQYRVASNLVRVELVDGPSGVAKAGRAIAAGLWPALEELVVARCHANAEQFKKVAQGIASGKVPNLRVLNWDRQTYHRRRPLDDVLLLALSAGKCPLIESLSFTDNRFCPEFSIFYIRQALRACPKLQELRMDCSRTPRNELVELVSALREGSAPHLASLFVRSTKAYHMSDETKPAVQALRETVQLRIPPVCVEVQIKT 367
            +S +ED      T HMGL A GAL TGRAV RITI      QD       LE+AI+RVV+HSIPTLR I I+      G++  R+ A+L  LVPLS K++RVA  L RV LVDG +GVAKAGRA+AAGLWPALE L  + C ANA  F+ +A+G+ SG  P LRVL WD Q+  R   +DDV+L ALS G+CPL+E LSFT NRFCPE  I Y+ + L  CP+L+ELRMDCSRTP ++L  L  AL  G  P L  L VR+T  Y+   + +  + AL+     R PPV +E+QIKT
Sbjct:   11 YSPSEDPTGAELTNHMGLDASGALATGRAVVRITITYVHHFQDP-----ALEQAIRRVVQHSIPTLREIAIRGYPTWTGRA--RVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVE--LLALKRAAASRSPPVELELQIKT 298          
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 2.180e-85
Identity = 179/425 (42.12%), Postives = 220/425 (51.76%), Query Frame = 0
Query:   28 LGTLPLPLVSEIGAFSAGGFLSGACRTTLEALRELHYKVDMEVHAHSFSEAEDILCHTSTEHMGLQADGALVTGRAVTRITIKGCGDRQDQEAGYEVLEKAIKRVVRHSIPTLRSITIK-----------------------------------------------------------------------------ARGQSCNR--------IAAVLDALVPLSTKQYRVASNLVRVELVDGPSGVAKAGRAIAAGLWPALEELVVARCHANAEQFKKVAQGIASGKVPNLRVLNWDRQTYHRRRPLDDVLLLALSAGKCPLIESLSFTDNRFCPEFSIFYIRQALRACPKLQELRMDCSRTPRNELVELVSALREGSAPHLASLFVRSTKAYHMSDETKPAVQALRETVQLRIPPVCVEVQIKT 367
            L  LP  ++ EI +F+    LSG CRTTL A+RELHYK+DM       S A  +     T HMGL A GAL TGRAV RITI      QD       LE+AI+RVV+HSIPTLR I I+                                                                             ARG             + A+L  LVPLS K++RVA  L RV LVDG +GVAKAGRA+AAGLWPALE L  + C ANA  F+ +A+G+ SG  P LRVL WD Q+  R   +DDV+L ALS G+CPL+E LSFT NRFCPE  I Y+ + L  CP+L+ELRMDCSRTP ++L  L  AL  G  P L  L VR+T  Y+   + +  + AL+     R PPV +E+QIKT
Sbjct:  106 LDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKIDMN----KVSSAHYLKRSELTNHMGLDASGALATGRAVVRITITHVLHAQDP-----ALEQAIRRVVQHSIPTLREIAIRRYPTWNGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYRDSDVE--LLALKRAAASRSPPVELELQIKT 519          
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 5.850e-61
Identity = 110/214 (51.40%), Postives = 139/214 (64.95%), Query Frame = 0
Query:  154 RIAAVLDALVPLSTKQYRVASNLVRVELVDGPSGVAKAGRAIAAGLWPALEELVVARCHANAEQFKKVAQGIASGKVPNLRVLNWDRQTYHRRRPLDDVLLLALSAGKCPLIESLSFTDNRFCPEFSIFYIRQALRACPKLQELRMDCSRTPRNELVELVSALREGSAPHLASLFVRSTKAYHMSDETKPAVQALRETVQLRIPPVCVEVQIKT 367
            R+ A+   LVPLS K++RVA  L RV LVDG +G AKAG+A+AAGL PALE    + C ANA  F+ +A+G+ SG  P LRVL WD Q+  R   LDDV+L ALS G CPL+E LSFT  RFCPE SI Y+ +    CP+L+ELRMDCSRTP ++L  L  AL     P L  L VR+T  Y+   + +  + AL+     R PPV +E+QIKT
Sbjct:   13 RVGAIRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAGEHVPRLERLLVRATAPYYRDSDVE--LLALKLAAASRSPPVALELQIKT 224          
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Match: A0A6H5KEB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB8_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 4.040e-11
Identity = 41/82 (50.00%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   28 LGTLPLPLVSEIGAFSAGGFLSGACRTTLEALRELHYKVDMEVHAHSFSEAEDILCHTSTEHMGLQADGALVTGRAVTRITI 109
            L  LP  ++ EI +F+    LSG CRTTL A+RELHYKV+M          ED++      HMGL A GAL TGR V RITI
Sbjct:   68 LDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKVNM---------TEDVVGAEIKHHMGLDASGALATGRDVVRITI 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig384.10057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KDB3_9PHAE3.510e-9648.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAY2_ECTSI2.700e-9054.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWR8_ECTSI3.610e-8752.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWR9_ECTSI2.180e-8542.12Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KU71_9PHAE5.850e-6151.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB8_9PHAE4.040e-1150.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 102..355
e-value: 3.5E-9
score: 37.4
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 201..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig384contigH-paniculata_contig384:19927..21444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig384.10057.1mRNA_H-paniculata_contig384.10057.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig384 19927..21444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig384.10057.1 ID=prot_H-paniculata_contig384.10057.1|Name=mRNA_H-paniculata_contig384.10057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp
VATASARAADNRAASPPTPLAIIAPASLGTLPLPLVSEIGAFSAGGFLSG
ACRTTLEALRELHYKVDMEVHAHSFSEAEDILCHTSTEHMGLQADGALVT
GRAVTRITIKGCGDRQDQEAGYEVLEKAIKRVVRHSIPTLRSITIKARGQ
SCNRIAAVLDALVPLSTKQYRVASNLVRVELVDGPSGVAKAGRAIAAGLW
PALEELVVARCHANAEQFKKVAQGIASGKVPNLRVLNWDRQTYHRRRPLD
DVLLLALSAGKCPLIESLSFTDNRFCPEFSIFYIRQALRACPKLQELRMD
CSRTPRNELVELVSALREGSAPHLASLFVRSTKAYHMSDETKPAVQALRE
TVQLRIPPVCVEVQIKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf