prot_H-paniculata_contig38327.10042.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig38327.10042.1
Unique Name	prot_H-paniculata_contig38327.10042.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	130

Homology

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BLAST of mRNA_H-paniculata_contig38327.10042.1 vs. uniprot
Match: A0A6H5KS43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS43_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.180e-19
Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0

Query:    2 HKRGVGAASRTNFHYHFRLEGYPPQLGIWRHVRAVPQCRDLIESYRSRAPLKDASSFDPPQR 63
            HKRGVGAAS  NF YH +L+ Y  QLG+WRH RA+PQC ++I SYR+    +D S+F PP+R
Sbjct:   52 HKRGVGAASLDNFQYHLKLKDYSSQLGLWRHYRAIPQCAEMIASYRAEILSQDPSAFSPPRR 113

[Close]

BLAST of mRNA_H-paniculata_contig38327.10042.1 vs. uniprot
Match: A0A6H5K112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K112_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 4.460e-17
Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0

Query:    2 HKRGVGAASRTNFHYHFRLEGYPPQLGIWRHVRAVPQCRDLIESYRSRAPLKDASSFDPPQR 63
            HKRGVGAAS  NF YH +L+ Y  QLG+WRH RA+PQC ++I SYR+    +D S+F PP+R
Sbjct: 1118 HKRGVGAASLDNFQYHLKLKDYSSQLGLWRHYRAIPQCAEMIASYRAEILSQDPSAFSPPRR 1179

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig38327.10042.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig38327.10042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KS43_9PHAE	3.180e-19	58.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K112_9PHAE	4.460e-17	58.06	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 78..95
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..77
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 96..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig38327	contig	H-paniculata_contig38327:1609..2046 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig38327.10042.1	mRNA_H-paniculata_contig38327.10042.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig38327 1609..2046 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig38327.10042.1 ID=prot_H-paniculata_contig38327.10042.1|Name=mRNA_H-paniculata_contig38327.10042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp
AHKRGVGAASRTNFHYHFRLEGYPPQLGIWRHVRAVPQCRDLIESYRSRA
PLKDASSFDPPQRKSITYPHFRHRQPPIVPPGVLWLSPAVTLALLNARMF
SERSRCAPSERRHRFFLPVAFPFPRSRVSY