prot_H-paniculata_contig38086.9989.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38086.9989.1
Unique Nameprot_H-paniculata_contig38086.9989.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length46
Homology
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: D8LQE8_ECTSI (HRDC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE8_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 4.650e-17
Identity = 37/44 (84.09%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 QAARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            QAARQL LPSF LAHLL+ FCDFV DKKHQLSDWRMRPLP +ML
Sbjct:  417 QAARQLGLPSFGLAHLLEKFCDFVPDKKHQLSDWRMRPLPADML 460          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: A0A0D2U959_CAPO3 (Exosome component 10 protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U959_CAPO3)

HSP 1 Score: 66.2 bits (160), Expect = 1.680e-11
Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 QAARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            QAAR L L S+SLAHLL+ FC+  ADKK+QL+DWR+RP+P EML
Sbjct:  396 QAARVLELGSYSLAHLLRYFCNVTADKKYQLADWRIRPIPAEML 439          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: A0A5C3QJ95_9AGAR (HRDC domain-containing protein n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QJ95_9AGAR)

HSP 1 Score: 65.1 bits (157), Expect = 4.280e-11
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    2 AARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            A++ L  P   LAHLL+ +CDFV DKKHQLSDWR+RPLP +ML
Sbjct:  460 ASKVLDFPRHGLAHLLEMYCDFVPDKKHQLSDWRIRPLPEDML 502          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: A0A1Y1I4U0_KLENI (HRDC domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4U0_KLENI)

HSP 1 Score: 64.3 bits (155), Expect = 8.000e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 QAARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEMLK 45
            QAARQLAL  F L HLL+ FC    DK++QL+DWR+RPLP EM K
Sbjct:  432 QAARQLALSGFGLGHLLEHFCGVHTDKRYQLADWRLRPLPEEMFK 476          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: A0A0D0DC32_9AGAM (HRDC domain-containing protein n=1 Tax=Paxillus rubicundulus Ve08.2h10 TaxID=930991 RepID=A0A0D0DC32_9AGAM)

HSP 1 Score: 64.3 bits (155), Expect = 8.000e-11
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    2 AARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            A++ L  P  SLA+LL+TFCDF+ DK++QL+DWR+RPLP EML
Sbjct:  403 ASKLLEFPRHSLANLLETFCDFIPDKRYQLADWRIRPLPVEML 445          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: L8H2P3_ACACA (3'5' exonuclease domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2P3_ACACA)

HSP 1 Score: 63.9 bits (154), Expect = 1.090e-10
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 QAARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEMLK 45
            QA R L  PSFSLA+LL+  C  +ADKK+QL+DWR+RPLP EMLK
Sbjct:  361 QACRVLEYPSFSLAYLLRHHCGVLADKKYQLADWRIRPLPEEMLK 405          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: A0A0C9W6V2_9AGAM (HRDC domain-containing protein n=1 Tax=Hydnomerulius pinastri MD-312 TaxID=994086 RepID=A0A0C9W6V2_9AGAM)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-10
Identity = 26/43 (60.47%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    2 AARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            A++ L  P  SLA+LL+T+CDF+ DK++QL+DWR+RPLP EML
Sbjct:  396 ASKVLEFPKHSLANLLETYCDFIPDKRYQLADWRIRPLPNEML 438          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: D2VPJ2_NAEGR (3'-5' exonuclease and HRDC domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VPJ2_NAEGR)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-10
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 QAARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEMLK 45
            QA R LALP  SLA+LL+ +C   ADKK+QL+DWR+RPLP+EM+K
Sbjct:  445 QACRTLALPGCSLAYLLKHYCGIDADKKYQLADWRVRPLPSEMVK 489          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: A0A0C3BAH9_9AGAM (HRDC domain-containing protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3BAH9_9AGAM)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-10
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    2 AARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            A+R L LP  SLA LL  +CDF ADK++QL+DWR+RPLP+EML
Sbjct:  343 ASRALELPRASLAFLLSAYCDFTADKRYQLADWRIRPLPSEML 385          
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Match: G4TVA2_SERID (Related to nucleolar 100K polymyositis-scleroderma protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TVA2_SERID)

HSP 1 Score: 63.5 bits (153), Expect = 1.500e-10
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    2 AARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEML 44
            A+R L LP  SLA LL  +CDF ADK++QL+DWR+RPLP EML
Sbjct:  344 ASRALELPRHSLAFLLSAYCDFTADKRYQLADWRIRPLPAEML 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38086.9989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQE8_ECTSI4.650e-1784.09HRDC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A0D2U959_CAPO31.680e-1168.18Exosome component 10 protein n=1 Tax=Capsaspora ow... [more]
A0A5C3QJ95_9AGAR4.280e-1165.12HRDC domain-containing protein n=1 Tax=Pterula gra... [more]
A0A1Y1I4U0_KLENI8.000e-1164.44HRDC domain-containing protein n=1 Tax=Klebsormidi... [more]
A0A0D0DC32_9AGAM8.000e-1162.79HRDC domain-containing protein n=1 Tax=Paxillus ru... [more]
L8H2P3_ACACA1.090e-1066.673'5' exonuclease domain containing protein n=1 Tax... [more]
A0A0C9W6V2_9AGAM1.490e-1060.47HRDC domain-containing protein n=1 Tax=Hydnomeruli... [more]
D2VPJ2_NAEGR1.490e-1064.443'-5' exonuclease and HRDC domain-containing prote... [more]
A0A0C3BAH9_9AGAM1.500e-1065.12HRDC domain-containing protein n=1 Tax=Serendipita... [more]
G4TVA2_SERID1.500e-1065.12Related to nucleolar 100K polymyositis-scleroderma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.420.500coord: 1..45
e-value: 2.7E-17
score: 64.8
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 1..45
NoneNo IPR availablePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 1..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..45
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 2..44
e-value: 3.0E-6
score: 27.0
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38086contigH-paniculata_contig38086:1708..1845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38086.9989.1mRNA_H-paniculata_contig38086.9989.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38086 1708..1845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38086.9989.1 ID=prot_H-paniculata_contig38086.9989.1|Name=mRNA_H-paniculata_contig38086.9989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
QAARQLALPSFSLAHLLQTFCDFVADKKHQLSDWRMRPLPTEMLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf