prot_H-paniculata_contig3805.9978.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: D8LGZ7_ECTSI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ7_ECTSI) HSP 1 Score: 808 bits (2086), Expect = 4.520e-282 Identity = 424/611 (69.39%), Postives = 471/611 (77.09%), Query Frame = 0
Query: 1 VGTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
VG GD R Q+RAGD PVMVGS+RCHL+GHGPA+L RGREE+GEMGGYFIVRGIERVIRLLQVPKRNYAHAI+RGTFKDRG GYS+ GVMMRC RKD ST+TVT+HYI+TGG TLRF+V+KQEF+VPVVI+LKALRDT+DREIHER+LQGQ NTFLAAHVEVLLRDGKRWGLHSR ESLAFLG+TFRTV+QA A+ TD ++GK VI+R + C RCR + P L + + L VRQ I RDARM AKA +QVRD K++ K LDR+G +VGQGM+TFLSTGN+ S SGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLAT C+VV G G PPP +SP SLES+LV LGV PAGTGAGDG+ SLP LPV+++GRV+GGGS ATL RA VDPTLEVGW+PPMKGGAGPYPGL+L SEGARMCRPV+HL +GR+EWIGP+ QQFMEIACLADDVR GLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQ Q G
Sbjct: 105 VGDGDVVRTQKRAGDCPVMVGSRRCHLRGHGPARLTRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARKDQSTLTVTLHYISTGGATLRFSVRKQEFLVPVVIILKALRDTSDREIHERVLQGQKDNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLQAPATATDIELGKKVIDRV---------ETGWC-----------WPWRCRWNWPRCC----------LRALFVS------LPAVRQLIGRDARMDQAKAVMQVRDAKHMAKYLDRFGSAVGQGMSTFLSTGNVISTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGKAPPPAESPLSLESLLVRLGVAPAGTGAGDGALSLPSSFLPVLVDGRVVGGGSEATLKRAXXXXXXXXXXXXXXXXXXX----------XXXXXXXVDPTLEVGWVPPMKGGAGPYPGLFLNSEGARMCRPVLHLQSGRMEWIGPMAQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMG 669
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA) HSP 1 Score: 649 bits (1675), Expect = 1.250e-218 Identity = 342/627 (54.55%), Postives = 430/627 (68.58%), Query Frame = 0
Query: 5 DTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRC--------------------GRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
+ +R+QRR G+ P+MV SKRCHL G GP ++ +EE E+GGYFIV G+ERVIRLLQVP+RN+A AI R FK+RG YSD+GV MRC GR+D ST TVT+HY+TTGG TLR++V++ EF+VPV++V+KALR+ +DRE++ER+L G NT LAA +EVLL D R GLH+R++ LAFLG+ FR V T +D +G +INR++LVHL RH DKQE +L ML+K PGHL+ M +KE++ L KVR + + +R+ AKA L +D K + KL+DRYG+ GQ MA+FLSTGNIT+++GLDLMQ SGFT+VAERIN LRYL+HFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDG+PCGLLNH+A +C+ ILVSLG+TPAG G+GDGS +LPYY +PVM++GRV+GGG+ TL + LRRLKV A V+PT+EV LPPMK G+GP+PGL+L + +RM RPV+++ + EWIGPLEQ FMEIACLA + + TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct: 145 EAQRVQRRLGECPIMVRSKRCHLAGLGPKEMVALKEEDTEIGGYFIVGGLERVIRLLQVPRRNHAQAIRRSAFKNRGQVYSDLGVSMRCDHSPLQLXXXXXXXXXXXXXGRRDHSTATVTLHYLTTGGATLRWSVRRAEFLVPVMVVIKALREISDRELYERVLAGDTANTQLAARLEVLLLDAARVGLHTREQCLAFLGSRFRAVGNRTDVHSDLALGIEIINRHVLVHLKRHEDKQETLLHMLKK------------------------PGHLFTMYMKEKLFDVLVKVRSELLKQSRIDVAKALLAAQDPKTIIKLVDRYGIGTGQRMASFLSTGNITTSTGLDLMQASGFTVVAERINMLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHMAAECQ--------------------ILVSLGMTPAGIGSGDGSTALPYYYMPVMVDGRVVGGGTHETLQAVSRGLRRLKV----------------------ATPPAVEPTMEVALLPPMKKGSGPFPGLFLFTGASRMIRPVLNIEFCKREWIGPLEQPFMEIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMG 705
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA) HSP 1 Score: 646 bits (1667), Expect = 1.080e-216 Identity = 337/613 (54.98%), Postives = 427/613 (69.66%), Query Frame = 0
Query: 4 GDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGW-----GVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
G R+QR G++P+MV S RC L G +L +EE+ E GGYFIV GIER+IRLLQ+P+RN+A AI+R TFK RGTGYSD GV MRC R D S++TVT+HY+T G T R + KQEF+VPVV+VLKALRD TD E++ER+ G NT+L VE+LLR+ + SR ++L++LG+ FRTV+ + + +DA G+ +++R++ +HL H DKQEC+L MLRKLYAFVQGRCR D PD+ N ELLLPGHLY + +KE++E L Q + ++ R A+A +D+ Y +LL R+G VG+ A LSTGN+ S +G+D+MQVSG+TIVAER+NF R+L+HF+SVHRGQFFTTMKTTAVRKLLPES+GFLCPVHTPDGSPCGLLNH+AT RV+ +LV LGV+P G G+ DG+ L LPV+L+GRV+GG V R LRR K + V G + G G VD TLEV ++ P++GG P PGL+L S ARM RPV+HL TG +E+IGP+EQ FME+A L +DVRAG TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQ Q G
Sbjct: 156 GGVMRVQRTLGELPIMVCSSRCRLAGKKAEELVALKEEACECGGYFIVNGIERIIRLLQLPRRNHAMAISRNTFKGRGTGYSDKGVTMRCVRPDQSSITVTLHYLTNGNATFRVTILKQEFLVPVVLVLKALRDLTDEELYERITLGDEDNTYLVTRVEMLLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHSDADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSFMNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEAYWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFFRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHVATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKDHLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDA--------QRLRGKGRVDATLEVAFIHPVRGG--PAPGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMG 758
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS) HSP 1 Score: 603 bits (1556), Expect = 5.150e-202 Identity = 323/624 (51.76%), Postives = 419/624 (67.15%), Query Frame = 0
Query: 8 RLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRK--DLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKAL---------RDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRW-GLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGL----SVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVT-GSGTKPPPPQSPSSLESILVSLGVTPAGTGA--GDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPP-MKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
R+ R G MP+M SK CHL G PA+L + +EE E GGYFIV GIER +RLLQVP+ N+A +I R +K+RG Y+D+GV +RC R D+ST+T T+HY+TTGG TL+F +KQEF++P+V+V++AL TD E++ R++QG NTF+ A E+LLR+ K++ G+ + +E LAF+G+ FR + ST+D +IG +INRYIL+HL + DK E L MLRKLY+F G C D D+L N E+LLPGHL +KE+ + L +R + ++ RM K V K+ K +DRYG+ +G+ + FLSTGNI S++GLDLMQVSG+TIVAE++NFLR+ AHFRSVHRGQFF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A +C+ + + K Q L+ +L+S GVTPAGTG GDG + LPVM+NGRV+GG SV A +LR LKV K V PTLEV ++PP MKGG PYPGL+L + AR+ RPV+ TGR E+IGP+EQ FM+IACL +D+R G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct: 2 RISRNFGMMPIMTMSKACHLYGKSPAELVKVKEEQTEFGGYFIVNGIERCVRLLQVPRANHATSIQRSNYKNRGKLYTDLGVAIRCQRHNGDMSTITNTLHYLTTGGATLKFVARKQEFLLPLVLVMRALSGGDGSTRGHGITDEELYNRIVQGDESNTFVRARAELLLREAKQFNGMQTPEECLAFVGSRFRLMSMKANSTSDVEIGHYIINRYILIHLPSYGDKLEYTLFMLRKLYSFAAGDCGVDNADSLQNQEILLPGHLMCTFVKEKFDETLANIRLGLLKEMRMDYTKLLTSVPQVKFWTKCVDRYGMLSSGGIGKKVQHFLSTGNIISSTGLDLMQVSGYTIVAEKLNFLRFCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKCQCMAYPADAKDGEMQD---LDELLISWGVTPAGTGGEGGDGRTISNFTNLPVMVNGRVVGGASVKLCKSIAFQLRSLKVQE------KPT----------------VPPTLEVAYIPPGMKGG--PYPGLFLFTIAARVVRPVLQRATGRTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMG 598
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A2D4BW55_PYTIN (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW55_PYTIN) HSP 1 Score: 597 bits (1538), Expect = 5.720e-198 Identity = 318/619 (51.37%), Postives = 424/619 (68.50%), Query Frame = 0
Query: 2 GTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATA-STTDAQIGKMVINRYILVHLNRHN----DKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLES------ILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQ 609
G+ + RLQR GD+P+MV SKRCHL G PA+L + REE+ EMGGYFI G ER +RLLQ+P+R++ A+ RG F +RG Y+++ V M+C ++D + VTVT+HY+ G TLRF V+KQEFM+PV ++LKAL TDREI+ER+L+G+ +NT+L+A VE++LR+ K++ ++SR E+LA+LG FR VM S ++ ++G +++ Y+ VH+ + K E + LMLRKLYAF +G RED D++ NHELLLPGHLYGMI+KE+++ L R +I + + + V D ++ ++ +R ++G M FL+TGN+ S+SGLDL+QV+G+TIVAE++N+ RY +HFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA +C++VT PP Q+ L+ L SLG+ P +G DG+ +PY+ LPVMLNG+V+GG V + R A LR +K E A GV LEV + P GG +PGLYLAS+ ARM RPV + T R+EWIGP+EQ FM+IAC D+R TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQ Q
Sbjct: 134 GSSNVERLQRVVGDIPIMVRSKRCHLNGLSPAELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQTAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLMLKALYPLTDREIYERVLRGEHENTYLSARVELILREAKKFSIYSRDEALAYLGKHFRHVMPYIYDSMSNVEVGSKMLDDYLFVHIPKGEKGRAQKVELVCLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYGMILKEKLQEMLAATRSNILKAVQ---TSKKAVVMDQAFMRQMWERTA-NIGNAMTYFLNTGNLRSSSGLDLLQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVTH-----PPHQADDYLQQELKLARFLTSLGMIPT-SGYADGALVVPYHYLPVMLNGKVLGGAPVESCKRIAETLRLVK---------SAESPA-------ERQEHGVVENLEVCLILPSLGGC--FPGLYLASDAARMTRPVKQMDTERIEWIGPMEQVFMDIACTQSDIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQ 723
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A5D6YCW8_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCW8_9STRA) HSP 1 Score: 596 bits (1537), Expect = 7.660e-198 Identity = 320/614 (52.12%), Postives = 420/614 (68.40%), Query Frame = 0
Query: 2 GTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVM-QATASTTDAQIGKMVINRYILVHLNRHN----DKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPS-SLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQ 609
G+ R+QR GD+P+MV SKRCHL G P +L + REE+ EMGGYFI G ER +RLLQ+P+R++ A+ RG F +RG Y+++ V M+C R+D S VTVT HY+ G T+RF VKKQEFM+PV +VLKAL +DREI+ER+L+G+ +NT+LAA VE++LR+ K++ L+SR E+LA+LG FR VM +T++ +G +++ ++ VH+ + K E + LMLRKLYAF +G RED D++ NHELLLPGHLY MI+KE+++ L +R +I +DA + R V D ++ K+ DR ++GQ M FL+TGN+ S+SGLDLMQV+G+TIVAE++N+ RY +HFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA +C +V+ + + L +LG+ P +G DG+ +PY LPVMLNG+V+GG A AR A LR+LK + A GV +EV + P GG YPGLYL+++ ARM RPV L T R+E+IGP+EQ FM+IA ADDVR TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQ Q
Sbjct: 130 GSAAVERIQRVVGDIPIMVRSKRCHLSGLSPPELVKRREEANEMGGYFICNGNERCVRLLQLPRRHHIMAVRRGAFANRGDLYTELAVFMKCVRRDQSAVTVTCHYLEDGNATVRFGVKKQEFMIPVGLVLKALYPLSDREIYERVLRGEHENTYLAARVELILREAKKFSLYSRDEALAYLGKHFRHVMPNVYEATSNVDVGSRMLDEFLFVHVPKGEKGRAQKVELLCLMLRKLYAFAKGDAREDNADSVMNHELLLPGHLYLMILKEKLQEQLAALRLNILKDATGTGSAKRTVVLDQVFLRKMWDRTP-NIGQAMTYFLNTGNLRSSSGLDLMQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECELVSHPAHAADDFLAHELKVARFLATLGMIPT-SGYADGALVVPYSYLPVMLNGKVLGGAPAAVCARLEAALRQLK----------------SADDAAERAAHGVVANMEVCLILPTLGGV--YPGLYLSTDAARMSRPVRQLDTQRVEYIGPMEQVFMDIAVTADDVRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQ 722
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA) HSP 1 Score: 593 bits (1529), Expect = 6.030e-196 Identity = 313/624 (50.16%), Postives = 419/624 (67.15%), Query Frame = 0
Query: 8 RLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGR--KDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDT-------TDREIHERLLQGQMKNTFLAAHVEVLLRDGKRW-GLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMAT----FLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESI---LVSLGVTPAGTG--AGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPP-MKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
R+ ++ GDMP+MV SK CHL G P QL + +EE E GGYFIV GIER +RLLQ+P+RN+ AI R +K RG Y+D+GV +RC R +D +++T TVHY+TTGG +L+F +KQEF++P++++L+AL T +D E++ R+LQG +NTFL A E+LL+D +R+ GL + E + F+G+ FR + S+TD IG +I ++IL+H+ + DK EC+LL++RKLY+F G C D D+L N E+L+PGHL +KE+ E +R + ++ R +K ++D K++DRYG G G+ FLSTGNI S+SGLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A + +T P P S +L+S+ L+ LG +P+G G +GDG + +P+ L+GRVIGG S AA+LR++KV E+ V PTLEV +P +KGG PYPGL+L + AR+ RPV+H +G+ E IGP+EQ FM+IACLA+DVR G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct: 162 RIPKKFGDMPIMVMSKACHLHGKNPEQLIQMKEEQNEFGGYFIVNGIERCVRLLQIPRRNHPTAIQRSNYKSRGPTYTDLGVAIRCARHNEDQTSITNTVHYLTTGGASLKFTARKQEFLIPIILILRALSGTKYGLGGVSDEELYNRILQGDEENTFLKARAELLLQDSQRFQGLSTPNECVEFIGSRFRMLSMKADSSTDEDIGHYIIKKFILIHIPEYGDKLECLLLLIRKLYSFAAGDCGVDNADSLQNQEILMPGHLVCSFVKEKFEEMFMAIRIGMLKEMRQDFSKILGNIQDTSTFSKIVDRYGNLAGGGIGKKVQHFLSTGNIISSSGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFLEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKSIPMTY-----PAPLSGDNLQSLDDLLIKLGASPSGAGGISGDGRGPSIHTHVPICLDGRVIGGASAKRCKSIAAQLRQMKV---------EDNAT-------------VPPTLEVALIPKGVKGG--PYPGLFLFTGAARLVRPVLHRASGKEEMIGPMEQPFMDIACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMG 756
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A8K1FE15_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE15_PYTOL) HSP 1 Score: 590 bits (1522), Expect = 1.550e-195 Identity = 316/620 (50.97%), Postives = 421/620 (67.90%), Query Frame = 0
Query: 1 VGTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQAT-ASTTDAQIGKMVINRYILVHLNR----HNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPP-QSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAG-----GVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQ 609
VG+ + R+QR GD+P+MV SKRCHL G P +L + REE+ EMGGYFI G ER +RLLQ+P+R++ A+ RG F +RG Y+++ V M+C ++D S VTVT+HY+ G TLRF V+KQEFM+PV +VLKAL TDREI+ER+L+G+ +NT+L+A E++LR+ K++ ++SR E+LA+LG FR VM S ++ ++G +++ Y+ VH+ + K E I LMLRKLYAF +G RED D++ NHELLLPGHLY MI+KE+++ L VR +I +D M +K R V D ++ K+ DR ++GQ M FL+TGN+ S+SGLDL+Q++G+TIVAE++N+ RY +H+RSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA +C++V+ Q L L SLG+ P +G DG+ +PY+ LP+MLNG+V+GG R A LR +K A A GV LEV + P GG +PGLYL+++ ARM RPV + T R+E+IGP+EQ FM+IAC D+R TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQ Q
Sbjct: 138 VGSNNVERIQRVVGDIPIMVRSKRCHLYGLSPPELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQSAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLVLKALYPLTDREIYERVLRGEHENTYLSARAELILREAKKFSIYSRDEALAYLGKHFRHVMPYVYESMSNVEVGSKMLDDYLFVHIPKGEKGRTQKVELICLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYNMILKEKLQDQLAMVRANIVKD--MQTSK-RAVVMDQVFIRKMWDRT-TNIGQAMLYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFSHYRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVSYPAHNADDYLQEELKLARFLTSLGMIPT-SGYTDGALVVPYHYLPIMLNGKVLGGAPAEVCKRIAEVLRHVK---------------------SAESADERKEHGVVQNLEVCLIVPTLGGC--FPGLYLSADAARMTRPVKQMDTQRIEYIGPMEQVFMDIACTKADIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQ 728
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A7S2V994_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V994_9STRA) HSP 1 Score: 590 bits (1521), Expect = 9.830e-195 Identity = 320/634 (50.47%), Postives = 409/634 (64.51%), Query Frame = 0
Query: 8 RLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRK--DLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDT----------------------TDREIHERLLQGQMKNTFLAAHVEVLLRDGKR--WGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLS----VGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
R+ + GD+P+MV SK CHL +L EE EMGGYFIV GIER +R+LQVP+RN A AI R +K+RG YSD+GV MRC R D STVT TVHY+TTGG TL+F KKQEF++PVV++++AL TD E++ R++QG KNTFL A LL+D + L++ QE LA++G FR + Q +++D ++G ++ YILVHL ++ DK EC+L MLRKLYAF G C D D+L N E+LLPGHL M +KE+ E L +RQ IT D R +KA ++ +Y K++DR+ +G+ +A FLSTGN+ S++GLDL+QVSG+TIVAER+NFLRY +HFRSVHRGQFF MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HL+ + V+ P LE +L+SLGVT AG GA G + LLPV ++GR+IGG S R A LR LKV K V T+EV ++PP G+ P+PGLYL + ARM RPV+ TG+ E+IGPLEQ FM+IACL +D+R G+TTH+ELDPTNMLSL+A+LTPFSD NQSPRNMYQ Q G
Sbjct: 176 RMPKEFGDLPIMVMSKACHLANTTAKELAAKNEEQNEMGGYFIVNGIERCVRMLQVPRRNLATAIQRSNYKNRGNIYSDLGVAMRCARYTGDQSTVTNTVHYLTTGGSTLKFVAKKQEFLIPVVLLIRALSGLASNPSDDSNDMNTETSGFGTGITDEEMYNRIVQGDEKNTFLVARAGSLLQDARSRYQNLNTPQECLAYVGARFRRLAQRAETSSDVEVGHFMVREYILVHLEKYGDKLECLLFMLRKLYAFAAGDCGVDNADSLQNQEILLPGHLISMFLKEKFEEVLSSIRQAITIDMRRSFSKASTNLQKVEYWSKMVDRFSQKSSGGIGKKVAHFLSTGNVISSTGLDLLQVSGYTIVAERLNFLRYCSHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLSLKGSVLAYEAKAEREDAPP--LEDLLLSLGVTRAGAGAPGGRTVSSHSLLPVCIDGRIIGGASSVDCKRIAVCLRELKVET------KPR----------------VPATMEVAFIPPGNKGS-PFPGLYLFTLSARMVRPVLQRATGKTEYIGPLEQGFMDIACLDEDIREGVTTHQELDPTNMLSLIANLTPFSDQNQSPRNMYQCQMG 784
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA) HSP 1 Score: 591 bits (1523), Expect = 1.510e-194 Identity = 315/633 (49.76%), Postives = 412/633 (65.09%), Query Frame = 0
Query: 4 GDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRK--DLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRD-------------TTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWG-LHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYG------LSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVT-GSGTKPPPPQSPSSLESILVSLGVTPAGTGA--GDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 611
G R +R GDMP+M S+ CHL+G P +L R +EE E GGYFIV GIER +R+LQ+P+RN+ AI RG++K RG Y+D+GV +R R D S++T TVHY+TTGG +LRF +KQEF++PVV++L+AL TD E++ R+++G NTFL A E+LL+D +R+ L E LA+LG FR + ST+D +G+ +I+R++L+HL H+DK E +LL+LRKLY+F G C D D+ N E+LLPGHL +KE+ E L+ VR + ++ R+ A+A V+D ++ +++DRY S+G+ + FLSTGNI S++GLDLMQVSG+TI+AER+NFLRY AHFRSVHRGQFF M+TTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA +C V++ + T Q L+ +L+ +GVTP GTG GDG + LPV L+GRV+GG A LR LKV + V PTLEV +P PYPGLYL + AR+ RPV+H TGR E IGP+EQ FM+IACL +DVR G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct: 170 GKVSRCNKRFGDMPIMTMSRACHLRGKSPEKLVRMKEEHNEFGGYFIVNGIERCVRILQIPRRNHPTAIQRGSYKKRGPTYTDLGVAVRSARHCGDCSSITNTVHYLTTGGASLRFPARKQEFLIPVVLLLRALSGXXXXXXXXXXXXXVTDEELYRRIVRGDSTNTFLRARAELLLQDARRFSDLADPSECLAYLGARFRMLSGRADSTSDVDVGRYMIDRFVLIHLPNHSDKLEYLLLLLRKLYSFAAGECGVDNADSFQNQEILLPGHLICHYVKEKFEESLQSVRLGLLKEMRVDFARAYSSVKDSRWWSRMVDRYAGIGGNASSIGKKVQHFLSTGNIVSSTGLDLMQVSGYTIIAERLNFLRYCAHFRSVHRGQFFMEMRTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCEVMSYPAETMGGKLQD---LDELLIGMGVTPCGTGGAGGDGRGTPDRGHLPVCLDGRVVGGAPARLCKSIAIHLRELKVAEPEPI---------------------VPPTLEVAHIPSTGSDGEPYPGLYLFTGSARVVRPVLHRRTGRTERIGPMEQPFMDIACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMG 778 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig3805.9978.1 ID=prot_H-paniculata_contig3805.9978.1|Name=mRNA_H-paniculata_contig3805.9978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=611bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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