mRNA_H-paniculata_contig3805.9978.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig3805.9978.1
Unique Name	mRNA_H-paniculata_contig3805.9978.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: D8LGZ7_ECTSI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ7_ECTSI)

HSP 1 Score: 808 bits (2086), Expect = 4.520e-282
Identity = 424/611 (69.39%), Postives = 471/611 (77.09%), Query Frame = 1

Query:    1 VGTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            VG GD  R Q+RAGD PVMVGS+RCHL+GHGPA+L RGREE+GEMGGYFIVRGIERVIRLLQVPKRNYAHAI+RGTFKDRG GYS+ GVMMRC RKD ST+TVT+HYI+TGG TLRF+V+KQEF+VPVVI+LKALRDT+DREIHER+LQGQ  NTFLAAHVEVLLRDGKRWGLHSR ESLAFLG+TFRTV+QA A+ TD ++GK VI+R          +   C              RCR + P             L  + +       L  VRQ I RDARM  AKA +QVRD K++ K LDR+G +VGQGM+TFLSTGN+ S SGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLAT C+VV G G  PPP +SP SLES+LV LGV PAGTGAGDG+ SLP   LPV+++GRV+GGGS ATL RA                                    VDPTLEVGW+PPMKGGAGPYPGL+L SEGARMCRPV+HL +GR+EWIGP+ QQFMEIACLADDVR GLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQ Q G
Sbjct:  105 VGDGDVVRTQKRAGDCPVMVGSRRCHLRGHGPARLTRGREEAGEMGGYFIVRGIERVIRLLQVPKRNYAHAISRGTFKDRGQGYSEKGVMMRCARKDQSTLTVTLHYISTGGATLRFSVRKQEFLVPVVIILKALRDTSDREIHERVLQGQKDNTFLAAHVEVLLRDGKRWGLHSRMESLAFLGSTFRTVLQAPATATDIELGKKVIDRV---------ETGWC-----------WPWRCRWNWPRCC----------LRALFVS------LPAVRQLIGRDARMDQAKAVMQVRDAKHMAKYLDRFGSAVGQGMSTFLSTGNVISTSGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATACKVVCGGGKAPPPAESPLSLESLLVRLGVAPAGTGAGDGALSLPSSFLPVLVDGRVVGGGSEATLKRAXXXXXXXXXXXXXXXXXXX----------XXXXXXXVDPTLEVGWVPPMKGGAGPYPGLFLNSEGARMCRPVLHLQSGRMEWIGPMAQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMG 669

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA)

HSP 1 Score: 649 bits (1675), Expect = 1.250e-218
Identity = 342/627 (54.55%), Postives = 430/627 (68.58%), Query Frame = 1

Query:   13 DTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRC--------------------GRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            + +R+QRR G+ P+MV SKRCHL G GP ++   +EE  E+GGYFIV G+ERVIRLLQVP+RN+A AI R  FK+RG  YSD+GV MRC                    GR+D ST TVT+HY+TTGG TLR++V++ EF+VPV++V+KALR+ +DRE++ER+L G   NT LAA +EVLL D  R GLH+R++ LAFLG+ FR V   T   +D  +G  +INR++LVHL RH DKQE +L ML+K                        PGHL+ M +KE++   L KVR  + + +R+  AKA L  +D K + KL+DRYG+  GQ MA+FLSTGNIT+++GLDLMQ SGFT+VAERIN LRYL+HFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDG+PCGLLNH+A +C+                    ILVSLG+TPAG G+GDGS +LPYY +PVM++GRV+GGG+  TL   +  LRRLKV                      A    V+PT+EV  LPPMK G+GP+PGL+L +  +RM RPV+++   + EWIGPLEQ FMEIACLA + +    TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct:  145 EAQRVQRRLGECPIMVRSKRCHLAGLGPKEMVALKEEDTEIGGYFIVGGLERVIRLLQVPRRNHAQAIRRSAFKNRGQVYSDLGVSMRCDHSPLQLXXXXXXXXXXXXXGRRDHSTATVTLHYLTTGGATLRWSVRRAEFLVPVMVVIKALREISDRELYERVLAGDTANTQLAARLEVLLLDAARVGLHTREQCLAFLGSRFRAVGNRTDVHSDLALGIEIINRHVLVHLKRHEDKQETLLHMLKK------------------------PGHLFTMYMKEKLFDVLVKVRSELLKQSRIDVAKALLAAQDPKTIIKLVDRYGIGTGQRMASFLSTGNITTSTGLDLMQASGFTVVAERINMLRYLSHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGAPCGLLNHMAAECQ--------------------ILVSLGMTPAGIGSGDGSTALPYYYMPVMVDGRVVGGGTHETLQAVSRGLRRLKV----------------------ATPPAVEPTMEVALLPPMKKGSGPFPGLFLFTGASRMIRPVLNIEFCKREWIGPLEQPFMEIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMG 705

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: W7TET2_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET2_9STRA)

HSP 1 Score: 646 bits (1667), Expect = 1.080e-216
Identity = 337/613 (54.98%), Postives = 427/613 (69.66%), Query Frame = 1

Query:   10 GDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGW-----GVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            G   R+QR  G++P+MV S RC L G    +L   +EE+ E GGYFIV GIER+IRLLQ+P+RN+A AI+R TFK RGTGYSD GV MRC R D S++TVT+HY+T G  T R  + KQEF+VPVV+VLKALRD TD E++ER+  G   NT+L   VE+LLR+   +   SR ++L++LG+ FRTV+  + + +DA  G+ +++R++ +HL  H DKQEC+L MLRKLYAFVQGRCR D PD+  N ELLLPGHLY + +KE++E  L    Q + ++ R   A+A    +D+ Y  +LL R+G  VG+  A  LSTGN+ S +G+D+MQVSG+TIVAER+NF R+L+HF+SVHRGQFFTTMKTTAVRKLLPES+GFLCPVHTPDGSPCGLLNH+AT  RV+                  +LV LGV+P G G+ DG+  L    LPV+L+GRV+GG  V    R    LRR K +         V G +             G G VD TLEV ++ P++GG  P PGL+L S  ARM RPV+HL TG +E+IGP+EQ FME+A L +DVRAG TTH+ELDPTNMLSLVASLTPFSDYNQSPRNMYQ Q G
Sbjct:  156 GGVMRVQRTLGELPIMVCSSRCRLAGKKAEELVALKEEACECGGYFIVNGIERIIRLLQLPRRNHAMAISRNTFKGRGTGYSDKGVTMRCVRPDQSSITVTLHYLTNGNATFRVTILKQEFLVPVVLVLKALRDLTDEELYERITLGDEDNTYLVTRVEMLLRESHDFATFSRNKALSYLGSRFRTVLGLSNAHSDADCGRALVDRFVCIHLGHHADKQECLLHMLRKLYAFVQGRCRADNPDSFMNQELLLPGHLYSVFVKEKLEETLTAAFQQLRKECREDLARALAATQDEAYWAQLLGRHGAGVGKKAAYLLSTGNLVSRTGMDMMQVSGYTIVAERLNFFRFLSHFQSVHRGQFFTTMKTTAVRKLLPESFGFLCPVHTPDGSPCGLLNHVATAARVLCHEDRLQGGRVRGGLATDLLVGLGVSPGGAGSADGALVLSKDHLPVLLDGRVVGGAPVDICRRVVRALRRFKAVSAPPPNPDAVQGPDA--------QRLRGKGRVDATLEVAFIHPVRGG--PAPGLFLFSGAARMVRPVLHLETGCVEYIGPMEQVFMEVALLPEDVRAGETTHQELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMG 758

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS)

HSP 1 Score: 603 bits (1556), Expect = 5.150e-202
Identity = 323/624 (51.76%), Postives = 419/624 (67.15%), Query Frame = 1

Query:   22 RLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRK--DLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKAL---------RDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRW-GLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGL----SVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVT-GSGTKPPPPQSPSSLESILVSLGVTPAGTGA--GDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPP-MKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            R+ R  G MP+M  SK CHL G  PA+L + +EE  E GGYFIV GIER +RLLQVP+ N+A +I R  +K+RG  Y+D+GV +RC R   D+ST+T T+HY+TTGG TL+F  +KQEF++P+V+V++AL            TD E++ R++QG   NTF+ A  E+LLR+ K++ G+ + +E LAF+G+ FR +     ST+D +IG  +INRYIL+HL  + DK E  L MLRKLY+F  G C  D  D+L N E+LLPGHL    +KE+ +  L  +R  + ++ RM   K    V   K+  K +DRYG+     +G+ +  FLSTGNI S++GLDLMQVSG+TIVAE++NFLR+ AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A +C+ +   +  K    Q    L+ +L+S GVTPAGTG   GDG     +  LPVM+NGRV+GG SV      A +LR LKV        K                  V PTLEV ++PP MKGG  PYPGL+L +  AR+ RPV+   TGR E+IGP+EQ FM+IACL +D+R G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct:    2 RISRNFGMMPIMTMSKACHLYGKSPAELVKVKEEQTEFGGYFIVNGIERCVRLLQVPRANHATSIQRSNYKNRGKLYTDLGVAIRCQRHNGDMSTITNTLHYLTTGGATLKFVARKQEFLLPLVLVMRALSGGDGSTRGHGITDEELYNRIVQGDESNTFVRARAELLLREAKQFNGMQTPEECLAFVGSRFRLMSMKANSTSDVEIGHYIINRYILIHLPSYGDKLEYTLFMLRKLYSFAAGDCGVDNADSLQNQEILLPGHLMCTFVKEKFDETLANIRLGLLKEMRMDYTKLLTSVPQVKFWTKCVDRYGMLSSGGIGKKVQHFLSTGNIISSTGLDLMQVSGYTIVAEKLNFLRFCAHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKCQCMAYPADAKDGEMQD---LDELLISWGVTPAGTGGEGGDGRTISNFTNLPVMVNGRVVGGASVKLCKSIAFQLRSLKVQE------KPT----------------VPPTLEVAYIPPGMKGG--PYPGLFLFTIAARVVRPVLQRATGRTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMG 598

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A2D4BW55_PYTIN (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW55_PYTIN)

HSP 1 Score: 597 bits (1538), Expect = 5.720e-198
Identity = 318/619 (51.37%), Postives = 424/619 (68.50%), Query Frame = 1

Query:    4 GTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATA-STTDAQIGKMVINRYILVHLNRHN----DKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLES------ILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQ 1827
            G+ +  RLQR  GD+P+MV SKRCHL G  PA+L + REE+ EMGGYFI  G ER +RLLQ+P+R++  A+ RG F +RG  Y+++ V M+C ++D + VTVT+HY+  G  TLRF V+KQEFM+PV ++LKAL   TDREI+ER+L+G+ +NT+L+A VE++LR+ K++ ++SR E+LA+LG  FR VM     S ++ ++G  +++ Y+ VH+ +       K E + LMLRKLYAF +G  RED  D++ NHELLLPGHLYGMI+KE+++  L   R +I +  +      +  V D  ++ ++ +R   ++G  M  FL+TGN+ S+SGLDL+QV+G+TIVAE++N+ RY +HFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA +C++VT      PP Q+   L+        L SLG+ P  +G  DG+  +PY+ LPVMLNG+V+GG  V +  R A  LR +K           E  A            GV   LEV  + P  GG   +PGLYLAS+ ARM RPV  + T R+EWIGP+EQ FM+IAC   D+R   TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQ Q
Sbjct:  134 GSSNVERLQRVVGDIPIMVRSKRCHLNGLSPAELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQTAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLMLKALYPLTDREIYERVLRGEHENTYLSARVELILREAKKFSIYSRDEALAYLGKHFRHVMPYIYDSMSNVEVGSKMLDDYLFVHIPKGEKGRAQKVELVCLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYGMILKEKLQEMLAATRSNILKAVQ---TSKKAVVMDQAFMRQMWERTA-NIGNAMTYFLNTGNLRSSSGLDLLQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVTH-----PPHQADDYLQQELKLARFLTSLGMIPT-SGYADGALVVPYHYLPVMLNGKVLGGAPVESCKRIAETLRLVK---------SAESPA-------ERQEHGVVENLEVCLILPSLGGC--FPGLYLASDAARMTRPVKQMDTERIEWIGPMEQVFMDIACTQSDIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQ 723

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A5D6YCW8_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCW8_9STRA)

HSP 1 Score: 596 bits (1537), Expect = 7.660e-198
Identity = 320/614 (52.12%), Postives = 420/614 (68.40%), Query Frame = 1

Query:    4 GTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVM-QATASTTDAQIGKMVINRYILVHLNRHN----DKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPS-SLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQ 1827
            G+    R+QR  GD+P+MV SKRCHL G  P +L + REE+ EMGGYFI  G ER +RLLQ+P+R++  A+ RG F +RG  Y+++ V M+C R+D S VTVT HY+  G  T+RF VKKQEFM+PV +VLKAL   +DREI+ER+L+G+ +NT+LAA VE++LR+ K++ L+SR E+LA+LG  FR VM     +T++  +G  +++ ++ VH+ +       K E + LMLRKLYAF +G  RED  D++ NHELLLPGHLY MI+KE+++  L  +R +I +DA    +  R  V D  ++ K+ DR   ++GQ M  FL+TGN+ S+SGLDLMQV+G+TIVAE++N+ RY +HFRSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA +C +V+          +    +   L +LG+ P  +G  DG+  +PY  LPVMLNG+V+GG   A  AR  A LR+LK                +        A GV   +EV  + P  GG   YPGLYL+++ ARM RPV  L T R+E+IGP+EQ FM+IA  ADDVR   TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQ Q
Sbjct:  130 GSAAVERIQRVVGDIPIMVRSKRCHLSGLSPPELVKRREEANEMGGYFICNGNERCVRLLQLPRRHHIMAVRRGAFANRGDLYTELAVFMKCVRRDQSAVTVTCHYLEDGNATVRFGVKKQEFMIPVGLVLKALYPLSDREIYERVLRGEHENTYLAARVELILREAKKFSLYSRDEALAYLGKHFRHVMPNVYEATSNVDVGSRMLDEFLFVHVPKGEKGRAQKVELLCLMLRKLYAFAKGDAREDNADSVMNHELLLPGHLYLMILKEKLQEQLAALRLNILKDATGTGSAKRTVVLDQVFLRKMWDRTP-NIGQAMTYFLNTGNLRSSSGLDLMQVAGYTIVAEKLNYYRYFSHFRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECELVSHPAHAADDFLAHELKVARFLATLGMIPT-SGYADGALVVPYSYLPVMLNGKVLGGAPAAVCARLEAALRQLK----------------SADDAAERAAHGVVANMEVCLILPTLGGV--YPGLYLSTDAARMSRPVRQLDTQRVEYIGPMEQVFMDIAVTADDVRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQ 722

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BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA)

HSP 1 Score: 593 bits (1529), Expect = 6.030e-196
Identity = 313/624 (50.16%), Postives = 419/624 (67.15%), Query Frame = 1

Query:   22 RLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGR--KDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDT-------TDREIHERLLQGQMKNTFLAAHVEVLLRDGKRW-GLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMAT----FLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESI---LVSLGVTPAGTG--AGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPP-MKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            R+ ++ GDMP+MV SK CHL G  P QL + +EE  E GGYFIV GIER +RLLQ+P+RN+  AI R  +K RG  Y+D+GV +RC R  +D +++T TVHY+TTGG +L+F  +KQEF++P++++L+AL  T       +D E++ R+LQG  +NTFL A  E+LL+D +R+ GL +  E + F+G+ FR +     S+TD  IG  +I ++IL+H+  + DK EC+LL++RKLY+F  G C  D  D+L N E+L+PGHL    +KE+ E     +R  + ++ R   +K    ++D     K++DRYG   G G+      FLSTGNI S+SGLDLMQVSG+TIVAER+NFLRY AHFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+H+A +   +T      P P S  +L+S+   L+ LG +P+G G  +GDG     +  +P+ L+GRVIGG S       AA+LR++KV         E+                V PTLEV  +P  +KGG  PYPGL+L +  AR+ RPV+H  +G+ E IGP+EQ FM+IACLA+DVR G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct:  162 RIPKKFGDMPIMVMSKACHLHGKNPEQLIQMKEEQNEFGGYFIVNGIERCVRLLQIPRRNHPTAIQRSNYKSRGPTYTDLGVAIRCARHNEDQTSITNTVHYLTTGGASLKFTARKQEFLIPIILILRALSGTKYGLGGVSDEELYNRILQGDEENTFLKARAELLLQDSQRFQGLSTPNECVEFIGSRFRMLSMKADSSTDEDIGHYIIKKFILIHIPEYGDKLECLLLLIRKLYSFAAGDCGVDNADSLQNQEILMPGHLVCSFVKEKFEEMFMAIRIGMLKEMRQDFSKILGNIQDTSTFSKIVDRYGNLAGGGIGKKVQHFLSTGNIISSSGLDLMQVSGYTIVAERLNFLRYCAHFRSVHRGQFFLEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHMALKSIPMTY-----PAPLSGDNLQSLDDLLIKLGASPSGAGGISGDGRGPSIHTHVPICLDGRVIGGASAKRCKSIAAQLRQMKV---------EDNAT-------------VPPTLEVALIPKGVKGG--PYPGLFLFTGAARLVRPVLHRASGKEEMIGPMEQPFMDIACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMG 756

[Close]

BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A8K1FE15_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE15_PYTOL)

HSP 1 Score: 590 bits (1522), Expect = 1.550e-195
Identity = 316/620 (50.97%), Postives = 421/620 (67.90%), Query Frame = 1

Query:    1 VGTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQAT-ASTTDAQIGKMVINRYILVHLNR----HNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPP-QSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAG-----GVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQ 1827
            VG+ +  R+QR  GD+P+MV SKRCHL G  P +L + REE+ EMGGYFI  G ER +RLLQ+P+R++  A+ RG F +RG  Y+++ V M+C ++D S VTVT+HY+  G  TLRF V+KQEFM+PV +VLKAL   TDREI+ER+L+G+ +NT+L+A  E++LR+ K++ ++SR E+LA+LG  FR VM     S ++ ++G  +++ Y+ VH+ +       K E I LMLRKLYAF +G  RED  D++ NHELLLPGHLY MI+KE+++  L  VR +I +D  M  +K R  V D  ++ K+ DR   ++GQ M  FL+TGN+ S+SGLDL+Q++G+TIVAE++N+ RY +H+RSVHRGQFFT MKTTAVRKLLP+SWGFLCPVHTPDGSPCGLLNHLA +C++V+          Q    L   L SLG+ P  +G  DG+  +PY+ LP+MLNG+V+GG       R A  LR +K                      A  A      GV   LEV  + P  GG   +PGLYL+++ ARM RPV  + T R+E+IGP+EQ FM+IAC   D+R   TTH E+ PTNMLSLVASLTPFSDYNQSPRNMYQ Q
Sbjct:  138 VGSNNVERIQRVVGDIPIMVRSKRCHLYGLSPPELVQAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFANRGALYTELAVFMKCVKRDQSAVTVTMHYLEDGNATLRFGVRKQEFMIPVGLVLKALYPLTDREIYERVLRGEHENTYLSARAELILREAKKFSIYSRDEALAYLGKHFRHVMPYVYESMSNVEVGSKMLDDYLFVHIPKGEKGRTQKVELICLMLRKLYAFAKGDIREDNSDSVMNHELLLPGHLYNMILKEKLQDQLAMVRANIVKD--MQTSK-RAVVMDQVFIRKMWDRT-TNIGQAMLYFLNTGNLRSSSGLDLLQIAGYTIVAEKLNYYRYFSHYRSVHRGQFFTEMKTTAVRKLLPDSWGFLCPVHTPDGSPCGLLNHLAVECQLVSYPAHNADDYLQEELKLARFLTSLGMIPT-SGYTDGALVVPYHYLPIMLNGKVLGGAPAEVCKRIAEVLRHVK---------------------SAESADERKEHGVVQNLEVCLIVPTLGGC--FPGLYLSADAARMTRPVKQMDTQRIEYIGPMEQVFMDIACTKADIRPA-TTHMEIKPTNMLSLVASLTPFSDYNQSPRNMYQCQ 728

[Close]

BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A7S2V994_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V994_9STRA)

HSP 1 Score: 590 bits (1521), Expect = 9.830e-195
Identity = 320/634 (50.47%), Postives = 409/634 (64.51%), Query Frame = 1

Query:   22 RLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRK--DLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDT----------------------TDREIHERLLQGQMKNTFLAAHVEVLLRDGKR--WGLHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYGLS----VGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            R+ +  GD+P+MV SK CHL      +L    EE  EMGGYFIV GIER +R+LQVP+RN A AI R  +K+RG  YSD+GV MRC R   D STVT TVHY+TTGG TL+F  KKQEF++PVV++++AL                         TD E++ R++QG  KNTFL A    LL+D +     L++ QE LA++G  FR + Q   +++D ++G  ++  YILVHL ++ DK EC+L MLRKLYAF  G C  D  D+L N E+LLPGHL  M +KE+ E  L  +RQ IT D R   +KA   ++  +Y  K++DR+       +G+ +A FLSTGN+ S++GLDL+QVSG+TIVAER+NFLRY +HFRSVHRGQFF  MKTTAVRKLLP+ WGFLCPVHTPDG PCGLL+HL+ +  V+            P  LE +L+SLGVT AG GA  G     + LLPV ++GR+IGG S     R A  LR LKV        K                  V  T+EV ++PP   G+ P+PGLYL +  ARM RPV+   TG+ E+IGPLEQ FM+IACL +D+R G+TTH+ELDPTNMLSL+A+LTPFSD NQSPRNMYQ Q G
Sbjct:  176 RMPKEFGDLPIMVMSKACHLANTTAKELAAKNEEQNEMGGYFIVNGIERCVRMLQVPRRNLATAIQRSNYKNRGNIYSDLGVAMRCARYTGDQSTVTNTVHYLTTGGSTLKFVAKKQEFLIPVVLLIRALSGLASNPSDDSNDMNTETSGFGTGITDEEMYNRIVQGDEKNTFLVARAGSLLQDARSRYQNLNTPQECLAYVGARFRRLAQRAETSSDVEVGHFMVREYILVHLEKYGDKLECLLFMLRKLYAFAAGDCGVDNADSLQNQEILLPGHLISMFLKEKFEEVLSSIRQAITIDMRRSFSKASTNLQKVEYWSKMVDRFSQKSSGGIGKKVAHFLSTGNVISSTGLDLLQVSGYTIVAERLNFLRYCSHFRSVHRGQFFMEMKTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLSLKGSVLAYEAKAEREDAPP--LEDLLLSLGVTRAGAGAPGGRTVSSHSLLPVCIDGRIIGGASSVDCKRIAVCLRELKVET------KPR----------------VPATMEVAFIPPGNKGS-PFPGLYLFTLSARMVRPVLQRATGKTEYIGPLEQGFMDIACLDEDIREGVTTHQELDPTNMLSLIANLTPFSDQNQSPRNMYQCQMG 784

[Close]

BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA)

HSP 1 Score: 591 bits (1523), Expect = 1.510e-194
Identity = 315/633 (49.76%), Postives = 412/633 (65.09%), Query Frame = 1

Query:   10 GDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFIVRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRK--DLSTVTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRD-------------TTDREIHERLLQGQMKNTFLAAHVEVLLRDGKRWG-LHSRQESLAFLGTTFRTVMQATASTTDAQIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALANHELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYVGKLLDRYG------LSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRYLAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLATQCRVVT-GSGTKPPPPQSPSSLESILVSLGVTPAGTGA--GDGSASLPYYLLPVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVLAAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRLEWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQVQCG 1833
            G   R  +R GDMP+M  S+ CHL+G  P +L R +EE  E GGYFIV GIER +R+LQ+P+RN+  AI RG++K RG  Y+D+GV +R  R   D S++T TVHY+TTGG +LRF  +KQEF++PVV++L+AL                TD E++ R+++G   NTFL A  E+LL+D +R+  L    E LA+LG  FR +     ST+D  +G+ +I+R++L+HL  H+DK E +LL+LRKLY+F  G C  D  D+  N E+LLPGHL    +KE+ E  L+ VR  + ++ R+  A+A   V+D ++  +++DRY        S+G+ +  FLSTGNI S++GLDLMQVSG+TI+AER+NFLRY AHFRSVHRGQFF  M+TTAVRKLLP+ WGFLCPVHTPDG PCGLL+HLA +C V++  + T     Q    L+ +L+ +GVTP GTG   GDG  +     LPV L+GRV+GG         A  LR LKV     +                     V PTLEV  +P       PYPGLYL +  AR+ RPV+H  TGR E IGP+EQ FM+IACL +DVR G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQ Q G
Sbjct:  170 GKVSRCNKRFGDMPIMTMSRACHLRGKSPEKLVRMKEEHNEFGGYFIVNGIERCVRILQIPRRNHPTAIQRGSYKKRGPTYTDLGVAVRSARHCGDCSSITNTVHYLTTGGASLRFPARKQEFLIPVVLLLRALSGXXXXXXXXXXXXXVTDEELYRRIVRGDSTNTFLRARAELLLQDARRFSDLADPSECLAYLGARFRMLSGRADSTSDVDVGRYMIDRFVLIHLPNHSDKLEYLLLLLRKLYSFAAGECGVDNADSFQNQEILLPGHLICHYVKEKFEESLQSVRLGLLKEMRVDFARAYSSVKDSRWWSRMVDRYAGIGGNASSIGKKVQHFLSTGNIVSSTGLDLMQVSGYTIIAERLNFLRYCAHFRSVHRGQFFMEMRTTAVRKLLPDQWGFLCPVHTPDGGPCGLLSHLALKCEVMSYPAETMGGKLQD---LDELLIGMGVTPCGTGGAGGDGRGTPDRGHLPVCLDGRVVGGAPARLCKSIAIHLRELKVAEPEPI---------------------VPPTLEVAHIPSTGSDGEPYPGLYLFTGSARVVRPVLHRRTGRTERIGPMEQPFMDIACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMG 778

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3805.9978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LGZ7_ECTSI	4.520e-282	69.39	DNA-directed RNA polymerase (Fragment) n=1 Tax=Ect...	[more]
A0A835YVF9_9STRA	1.250e-218	54.55	DNA-directed RNA polymerase subunit beta n=1 Tax=T...	[more]
W7TET2_9STRA	1.080e-216	54.98	DNA-directed RNA polymerase subunit beta n=2 Tax=M...	[more]
B8CA95_THAPS	5.150e-202	51.76	DNA-directed RNA polymerase subunit beta n=1 Tax=T...	[more]
A0A2D4BW55_PYTIN	5.720e-198	51.37	DNA-directed RNA polymerase subunit beta n=1 Tax=P...	[more]
A0A5D6YCW8_9STRA	7.660e-198	52.12	DNA-directed RNA polymerase subunit beta n=1 Tax=P...	[more]
A0A7S3V7B4_9STRA	6.030e-196	50.16	DNA-directed RNA polymerase subunit beta n=1 Tax=C...	[more]
A0A8K1FE15_PYTOL	1.550e-195	50.97	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S2V994_9STRA	9.830e-195	50.47	DNA-directed RNA polymerase subunit beta n=1 Tax=A...	[more]
A0A7S4JAV2_9STRA	1.510e-194	49.76	DNA-directed RNA polymerase subunit beta n=1 Tax=O...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3805	contig	H-paniculata_contig3805:809..14914 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	814.7
Seed ortholog evalue	2.9e-233
Seed eggNOG ortholog	2880.D8LGZ7
Preferred name	POLR1B
KEGG rclass	RC02795
KEGG ko	ko:K03002
KEGG Reaction	R00435,R00441,R00442,R00443
KEGG Pathway	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG Module	M00182
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007275,GO:0007565,GO:0007566,GO:0008150,GO:0008152,GO:0008361,GO:0009058,GO:0009059,GO:0009303,GO:0009553,GO:0009561,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016072,GO:0016740,GO:0016772,GO:0016779,GO:0017126,GO:0018130,GO:0019222,GO:0019438,GO:0022414,GO:0030880,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042790,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044703,GO:0044706,GO:0045793,GO:0045815,GO:0046483,GO:0048229,GO:0048518,GO:0048856,GO:0050789,GO:0051704,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090066,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.	DNA-directed 5'-3' RNA polymerase activity
EggNOG OGs	COG0085@1,KOG0216@2759
EC	2.7.7.6
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	br01611,ko00000,ko00001,ko00002,ko01000,ko03021
Exons	11
Model size	1833
Cds size	1833
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3805.9978.1	prot_H-paniculata_contig3805.9978.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig3805 809..14914 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig3805:809..14914+
coding sequence from alignment at H-paniculata_contig3805:809..14914+

protein sequence of mRNA_H-paniculata_contig3805.9978.1

>prot_H-paniculata_contig3805.9978.1 ID=prot_H-paniculata_contig3805.9978.1|Name=mRNA_H-paniculata_contig3805.9978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=611bp
VGTGDTRRLQRRAGDMPVMVGSKRCHLQGHGPAQLCRGREESGEMGGYFI
VRGIERVIRLLQVPKRNYAHAITRGTFKDRGTGYSDMGVMMRCGRKDLST
VTVTVHYITTGGCTLRFAVKKQEFMVPVVIVLKALRDTTDREIHERLLQG
QMKNTFLAAHVEVLLRDGKRWGLHSRQESLAFLGTTFRTVMQATASTTDA
QIGKMVINRYILVHLNRHNDKQECILLMLRKLYAFVQGRCREDKPDALAN
HELLLPGHLYGMIIKERMESWLEKVRQHITRDARMYPAKARLQVRDDKYV
GKLLDRYGLSVGQGMATFLSTGNITSASGLDLMQVSGFTIVAERINFLRY
LAHFRSVHRGQFFTTMKTTAVRKLLPESWGFLCPVHTPDGSPCGLLNHLA
TQCRVVTGSGTKPPPPQSPSSLESILVSLGVTPAGTGAGDGSASLPYYLL
PVMLNGRVIGGGSVATLARAAAELRRLKVMGGWGVGGKEEGGAGTGGGVL
AAGAGGVDPTLEVGWLPPMKGGAGPYPGLYLASEGARMCRPVMHLPTGRL
EWIGPLEQQFMEIACLADDVRAGLTTHRELDPTNMLSLVASLTPFSDYNQ
SPRNMYQVQCG

mRNA from alignment at H-paniculata_contig3805:809..14914+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig3805.9978.1 ID=mRNA_H-paniculata_contig3805.9978.1|Name=mRNA_H-paniculata_contig3805.9978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14106bp|location=Sequence derived from alignment at H-paniculata_contig3805:809..14914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGGACCGGAGACACGCGGAGACTGCAGCGGCGCGCCGGAGACATGCC
CGTCATGGTAGGGTCTAAGAGGTGCCACCTGCAGGGTCACGGGCCGGCGC
AGCTCTGCAGAGGGCGGGAGGAGTCCGGGGAAATGGGGGGTTACTTTATC
GTTCGGGGCATCGAGAGGGTCATACGACTGTTGCAGGTACTCTCTATATC
TTTCCCCTTGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTGGTAATTATTTTTTCGTGTGGGTGCC
GGAGGCCGTCAGTTTTCTGTTTAGTTCGTTATTTTTTCACACTTTGTCTA
AGTGATCTCATTATGATGATGATGATGACAGTCTTTTTCTCCCAGAAATT
TAATGTACTCCATGTATCCAAGGGCTATTCGTGGCGTGACCGTCGCCTAT
AGTCGCATACCAGGTAGTGTGCACAAACAGCGCTAAAGCAGCACGACATT
AGCTTAAGTCTGTGACAGATTCGGGCGACGTCGATTCAGCTCAGAACGAA
CTCTCCTTCCCGAAGACTTGCTTGGTAATATCCCCCTGGCTCCAGAACAG
CTTCTTGTCACTGGATTCGCACTGTAAAAGCAGGAGGGTGGAGTTTTTTT
TGTTTGTTTTTTAACTCCCGGAAGGCTGAGGGTAAAACCTTTATCCGATG
CTTCCATACTTGAGTGTTTTCCCGAAGTATTTCTACGTTTACTTTAACAG
AAGAGAGTTATTTATTCCTCTGCGGGGTAGGCGCTACCCCGGTTCGGCCG
AACCAAGTAGGCAGGAGGGTGGAGTGTAAGTGTTCAAGGCAAAGACCAGT
CACGGGTACACGAGCGTCCAATCAGTTATCACCCAATAACCGGTGGACTG
AAAGGGAACCTTGTCGGAGTGTGCTCACAGGGAGATAGGCGACTTCTGAC
TTGCTTTGCCTCCATTGACTACCTCACATTGAGAACGCGGTCGCTCATCA
TGCTCTCCGCTGCAACCACGTCTATCGTAATCTTATCTTACTGTGTGTGA
ACTCTTTGACCAAGCTTGACAAGCTCACAGAATATACCACACGGACTCCC
CCATGCCCTATCTACAACAGTTTTATCCCTCTCAGCTACATAAGCCAACC
TTGCCGAAGGGACACAGCAGACACATCGCTTCGTGTGTGATACTCTTTGA
GTAATATCTGTTTATTTACCCCTGACGGTGGGAGTATGGATGCAACACAC
ATGGTATCAAGCACGACACGTTTCGGCGTCTTCTCTGTTGATGAGGTAAA
ATGACATCACTCAAGCTATGTTTTTGAATATTTTGTGGCGAAGCTTGAGT
GATTGGTTGTCTTTTTTTTTTTTTTTTTTAACGTTTTCTTGGATAAGATT
TACTGGATTATGACACGTGACACATGTAACTCGAGAACCGAGTTTGTTTT
GTCAGTTAGATTCCCCATTCCCCCCCCAGCCACAGCTTTACCCAACGCTG
CCGTAAACATTACTCGCCCACGCGAAGGAACCCTTGTAAACGGTGAACGT
TATTGTCCCTCGTATATGAGCGGCTTGAACCGTTGTCAAGAACCCAATAG
GGATGAATAATTTGACAGCTCCAGAGGTGAGCGCGGTTATTTTGGAGTTG
CTCGCCGACAGTATTCCGCGTACTCGTGGTGCGGTGTACTTCCGCTTCTG
ATCGCAGAAGTGATAGGGACTTCTCTTCGTCTCGTGTACAAGTATCTCGC
AACACAGAGCCTATCTTACACCAAATGTAGATTACAAACCTGTATTTTCT
ATCCTCCGTTGTCGTTGCTCTCAAAACTAATCAAGAGTCAGTGAAGTGAA
GTGAAGTGAAGGAAGGCAATCGGTTCCCTCAGTCCTCACGCGCCTGCTAC
ATTCACCTCTCTACCGTGCATCTAGAACGTCTTCTCGAAACCTGAGCATC
TTTTCCTCTTCTCGACGTTCCCAAAATTCTCATTAACTTCAAAACGGTCA
ACTTTCCAATCGACACCAATTGTGCCGCATGTTTCCTCATAACATATGCT
GGGTAAGGAACGCTTGCAGAGCATTTCGACCCAACAGGCAGCAACAGGAG
TAGGGCATCGCGGAGCACAAGATACCTCCCCCAGCAGTCGAAAAGGAAGA
AATATTTTAGGTGGAGATCATCAGGGAAAAGCTCGTTTGTCGCTGATTTT
ATCATTTTTTTTTTTTTTTCCCATATAGGGTATTTACTTCCGTATCTCGT
ACTGCCCATCTGGACAAAGTCAGGGACGAGACGAAGATATCTCTGTTCGC
CCCCGTCCCCCGACACAAACTCCTATTTGTAATTTTTCAACCCAACCTAC
AATTCTATTCATGTCCATCCCTACCCGAGCCAATCAACGCAGAATCCAAT
TTCAATCCTCTACTCTCCAGTCCAGTCCAACCCGAACCGACCAACGACCA
ACGACCAACGACCAACGAAGTGGTTTTAATTCTGCCCCTACCCAGGTCAA
TCAACCCACATTCGAATTTCAATCTTCTCCTCTCCAACCCAATTCATCGA
CCCCATCGGACGTGACGACTTGGTCTTGCTACAGGTGCCGAAGAGGAACT
ACGCGCACGCAATCACGCGAGGAACATTCAAAGATCGAGGGACGGGCTAC
AGCGACATGGGGGTGATGATGCGCTGTGGCCGCAAGGACTTGAGTACGGT
GACTGTAACGGTTCACTATATTACTACCGGGGGCTGCACTTTGAGGTTTG
CCGTGAAGAAGCAGGTGGGTTTGTGGATGATGACGAAAATGGCAGGGGAG
AGGGGAGCTGTCGTTGTCATGAAAGGTCTCGTGTATCGTTTTAGTCCTGA
AATATAGGTCCCGAAACTGGTTGTAACCCCCCAAAAGAGACGAAGGGGGC
GGAGGGCGGTAAGTCAACCCTACCACAGGTGGTTGAACTATAACTCTGAA
ATTAATAATATATTATAACTCCATTGTACCCCTGTTGAGGGTATAAGGCT
GACTTTAAACTGCAGTTATATACACTTATCAGTAAGATTAGATCATGACC
AATAGCCGGGGGAGAGAGGTGGGGTGGGGGCTATGTTGGAGAGCTGAGGG
ATACGAGGACACACCTTGATTGAAAAAGGAGTGGATATGAACTACATCCA
GTCAACGTCTGTGATAAAGGAGATTTGACGTGGCCGTTTGAAGTATCGTC
AGTAACCTATCTACTGGTCGATGTTTACAGTTTATTGAGCTGGCCATTTT
ATGTCGATTCGAGCAACATGGGGGATTAGTTACCCGAACAAGGGGTCAGT
TAAATTATATCTGGCTACATTTTGCAGCATTACAGCATTGCGATGAAAGC
TATAACTTGGCAGTATATTTGTGTTTTGGCTGTGATAAATTCTAGAATAT
GTCCAAAAGGTTTTTAAAGATTGATATTTTCAGTCTGAATTTTTCACGTC
TCGCGTTTTCTGGTTGAACTATAATCATTTTGGAGCCCTGTGGGGAGCGT
TCTTGAGTGTGTGTGTGTGTGCGCGCGCGCGTCCCTAGGCCTGATGTAAC
CTATTTTGTATTTTTAGATAGAATGTTGTCCGAGGAACAGATGTCAAAAA
GAAAAGGAGATCTCAGACGGCTGCGTCCCGAAAGGGTTCATGAGTGTGGG
CTAGATTACGTCAGTTTCTTTTTGGAGTTCGAACGACAGAAACAACAGCT
TGTCTGAAATTTGGACGAGAAAATGGCTCTTAATTCCCGCACTACATTTC
CAAAGTTTCAGATTTCATCATCTCCACCCCCGGATGTGCTTGTAAATAGT
TCACCCCGCCGGACAAATACGAATGGATCATTCTCAACTATCTCGAAGTA
TCATTATTTTGTCTTGGGTAAACACGTATTTATTCGTTTACAAGTCTCTG
AATGGTCACTCTACAGATGGTCACCAGGTGGTCGCACACCCGGCGAATAG
TCGCACATGCAAGTCCTGTTTATTTTCCGGATGGTACTGTACAGATTGAA
TGCTTCATCTGCCCGAACGTTTCCAGATGCTCCATGGTATATCGAGTACA
CTGCATATCATTCGCGTCACATGGACATATTCCCCAACTCAAACAGATAC
AGCATTCATTCCAAATTTCTCGTATTTATTCGTGTCTCGTATGGGTATTT
GTCCGGGGGGGGGGTTGAAATAGTTATGACTATCAAGCATAATATGAATG
TGTGTGTACTGGAGATACTATGTGAGCTGTGGCAATTCGTTGGGGTGACT
TGTCTGTCTCGCCGGGTGGACGTGCACATGCGTCTATTTTCTGTCAGTGT
TGATTGTTACTAGTAGGGCATGTTATGTCCGTGCTGCACTTTACGCACGT
GAGTGGTAACGGTTATATTGTCCCTGGTAAACCCGCAAATGTAGTAGCCA
TGATCCACGTGTCCTGGTACATGATCCATAAACCGAGTAATTTTGCTCGC
CGCATATTAAAAACACGAACCAGGCAGCATGCAGTATATTGCGTATTACT
GTACACTCCAATCGGCAGCAGTCACAATTGTGTCCCCCCGCTTCTCCGGC
CCTCGCCGCTCCCTTATTCATGGGTGCTCATCCAACGCGATCGGACTATT
GTCTATTGCTGCAACAGGAGTTCATGGTGCCCGTGGTGATCGTTTTGAAG
GCGTTACGAGATACCACGGACAGGGAGATTCATGAGAGGTTGCTGCAAGG
GCAGATGAAAAATACCTTCCTGGCGGCCCACGTCGAGGTATGTCACGTAT
CATATAATGACTAATGGACAGGTAAACCCTGTAATATGTTGCACCTTGAA
AAGGTGAAGCTACGAACACGACGGCAACGAACCTAGTGGACAGCACCACT
GCGTTTCATCAACGCGCCCGAGGTTGCAGGAGGTCGGTTTTTAAGGTTAT
TACGATAGGCTTTTGTCGCGTGGTGTGGAGTCACGTCGGGTTGGAGTGAG
CATGGCCCTCTGTGAAGATCCGTGTGCGGATTGGTGGACATTGCGTTTGT
CGGAAGCGCCAGAAGCGGGTACAATTTCTGGGGGAAACTGTGCGTGGTCG
AAAAGCAGACACATGCTTCGGATAAACTTGGACACGAAAGGGTACAGACC
TGTATATATATATATATGTTATAGCTTTGGTCGTCGCCATCCGGCATTAT
TCATTTTAGTGTACCTCGTTGTTTTTATGTTCAAAATTAAAAATAAAACT
TAATTAAAAAAACAAATGAACTATTTTTTTATTTTTGTGCAATTTTTCTC
GTTTTAACAAGATGCATGTATGTTGTATTTACAAAAAAAATTGCCTAAAT
TCCTCTTTTTTTTCTTTTTTTCTTGTTTTACTCGGTTTTTTTTTCGAATT
ACACACCCAAGGTCTTGTTGCGGGACGGAAAACGATGGGGGTTGCACTCC
AGGCAGGAATCGTTAGCCTTCCTGGGGACAACCTTTCGGACAGTGATGCA
GGCGACGGCATCGACGACCGATGCCCAGATCGGGAAAATGGTTATTAACC
GGTGAGCTACTTTATAACTTATCCTTTGGGCGCCATTTGAAATTCAAAGA
GGCTGGTTCGGAATGAAAATAAACCTGATAATGGATGAATGTCGAGTTCT
CTCCTGAAGAGCCAAAAAGTGAACCGTGTGAGCACATTTTTATTTTTTTA
TTTTTTTATTTTTTTATCTTGAATCGAGTATAATTGAAGACACGGTGCTC
TCACGGTAGACCTCTCGCTATCCCTCTCCTGCAGGGGGCTCTGGTGGGGC
TCTGCTATTCGAGTCTAGGATCGGGGATGTAGAGTAAGTATTTAGTGTTG
GTACATACTTGTGGCTATTTTCGGAGAGTCCACCAGAAGGTGTGCTCTCC
TAAAAGTCGAAGATAGTTCTTAAGCTGCTCTGATATGATGAGGAAAACGC
GCCGATGGGTGTTATACAGGGATCGGGGTTCAGGAACTTCAAGAACCCAA
GGAACTTCAGGAACTTCAGGAACGTGATTTTACACATAGATTTTTGCAAG
TATTGGAGAACAAGAAGAAAAATCGTGGAAACGTCTTAAATATATATGTG
TGTACATATTCGTATCATTCGACTTTTGTTTTCGGCGTTGTTTCTTCCGT
TGATGCTATCAGTGTCTCTTGCTATCCCTTCATGTGATTTTCTAAGTTTG
TTGATGAGCATACGTAGCCTTGCGTGTGGTGGGTTGTATGACCTCAGTAA
GATCTCCTGTGGGTATTACAGTTCTTGACAAGTCATAGGGTGGGTTGATC
GGTTTACTGGGTGTTTCGGTATGATAATGTTTATGTTATTATCAGTATTC
AATGCTATTGCTTTTTGTAGGTCATGGGCTAAAACAGGACGTTACACACG
CGCTACTGTCGTGAAACAACAGGTCTAGTGCCTGTCAGATGCAGAAGCTC
TAGTCGGCGCGCTGCTCTATTCCAACCGATGCTGTGTGTCGCTTCTGGTG
CATGGTCGTGAATGGGCCGAGTCGAACACCGTATATATATATATATAACG
CGAGAAAAGAATTGTCCACGTACTTCGTTTTTGCTGCACACGCCAAAAAT
TCAACAGCAACAATTTATAGAACCCTCCTACCCCTCCCAGCCTGGCCGGC
GAAAACCAGATCAGCGGTCGAGAGACTTCGGCATGCGCTTTAATGAGTAA
ATCAGTACACTCCCCCCCCCCCCCTCCACCGTTCTCCCCAGGACGTGTGG
ACAATGTTTTACCTACTACGACATGCAGAATATGAGTACCCTCCCCGCCT
CCTCCCCCCCGTGCCGCTTTTTATGTTCGTATTTCCTCCTCGTACTTAAT
ACATATATATATATTTATTGCAGTTACATATTGGTCCACCTGAACCGACA
CAACGACAAGCAGGAGTGCATCCTGTTAATGCTCCGAAAGCTGTACGCGT
TCGTGCAGGGTCGATGTAGGGAAGACAAGCCCGACGCACTAGCCAATCAC
GAGCTGTTGCTCCCGGGACACCTGTACGGGATGATCATCAAGGAGAGGAT
GGAGAGCTGGCTGGAGAAGGTGTGATGGACAAGAGAGAGCGAGATAACGA
GCATTGTTAATCTCGTTCCAGAGATGGTGTTGGTCGCTTCCATTATCCAT
TGTTTTTCTTTCTCTGGTATAAAAGAAGCTCTATAGCGTTTATCCTCTCT
TAGTTGTTGAGTGTTGTTTTGCTCGTTGGTCTTTTGTTGTTGTTGTTGCT
GTGTGGTGTTGTTTCGATGTCTTTTTTTTTTTTTTTTTTGTGTATACTGC
ACGAAGTACTGTGTTAATGTTTTGGTGTGTTATCGTCCATATGATGCCAG
AACATCCCGAGGGATGCACCTTTTTTTCCCGATCAACTTGATGTTAAGAA
GCACGACGATGCTCCGTTAGAAAAGTGCGTCTATCGTGTGGACGAGTCGT
CGGCGATGAAGCCAGGATAGAGCAGTATACTTTTCCAAAATGAGGTTCAT
CTTTTAAAACTGAGATCCAACCCCAAAACAGCGCTTTTCCGAACCTAAAG
TCATGATCAGTTTGATCGCGTCGTAACCATTTCAGGGTCGTTCGCTACTC
CCGTGGCCCCACAGCGTTGTGCGAAAGCCTCTTTTTGGGCTCGAAATATC
GATATTTTCCCCTCGAAATCGTGGCAAAAATGATCTCTTCCGCACAACGC
TGTGGGGGCACGAGAGTAGCGAAAAGCCTAATTGTCGTTACAATGCGATC
CAGCGGCATTGGGTCCTCGAAATAAAGGTAATTGATGATCACTTTAGGAT
CAGGGAAAGGAGTGTTATAGGGTGTTGGGTTAGTAGCCCCGTTTGAAGTG
TCCCCGAGGGAACGGGATATGATCATCCCTGACTGGGTCTGATTTTGTCG
GTGAGAGTACACAAGGGAGAATTGAGGTCAGCAGAGTTGTGTAACAATGT
TTTTCGTATGAGCTTGTTAGAGCTATTCACTCTGCCAAGTGGATTGATTT
GTTTTTTTGCTTCGTGCCCCACCGCTCCGCCCCTCCCGGAGGAATATAGA
AGCGCCGTCCTCTCGAGGACTACATGCGTGGTCAACGGCATAACAACTGA
GACATGCAAACCTGAGTACCCCGCCCTACCCTAGTGATCTGAAATATTAA
GTCAGCCTCTACCCCCCCCCCCCCCCCCCCTGTCACCCCTCTTCCCGAAG
TATATAGGGAAGGTTAACATATGTTTTAGCGATATTTTGACCGGGTAGGC
AAGAAAGATTAGCAATCGGGAATCGCTCTTATTGATCGCAATGGTGTGCA
AGCGTTCGTTACTCACCCAGCATTTGTGATGTAGAAAAATATGCTGCACA
ATTGGTGTCGGTTGGATAGTTGACCGTTTTGAAGTTAATGAGAATTTTGG
GAACGTCGAGAAGGAAGTTTGGAAAGCATGAGATACACAGGTTTCGAGAA
GACGTTGTAGATGCACGGTAGAGAGGTGAATGCAGTAGGTGCGTGAGGAC
TGAGCAAGCCCATTACCTTCCTTGACTTCGCTTCACTGACTCTGATTAGT
TTTGAGAGCAACGGCAACGAAGGATAAGTACTATAGGTTTGTAATCTACA
TCTTGTGTAAGATACCCTCTGTGTTGCGAGGTACTCTGTACACGAGACAC
AGAGCGGTCCGTGTCACTTCTGCGATAAGAAGCGGAATTGCACTGCGCCA
CAAAGGGCGTGGAATAGCTCTCTGATAGGAACAATTCGTCGTCCTCGAGA
TAATGCGTGGTCACTGTCTAACAACGTCAGCGTGCAGAGCAAAGCATGAG
TACCCCCACCCAACCCCCCATCCACCCATGACCCCGACCCGGCCCGCCCC
CCCCTTACGGAGGAATCGTGATATTATCTACTTATCAAACATTGTAGGAT
GACACTTTTCCGCGGTGTTATACCAGGTAGTAGAGTCGATGCAATCTATA
CGAGGGATACCCGAGCAATATTTGGAACAGTAATTTCACTTTTTCCTGTG
GAGGCGGGTTGGAACATGATTGTACATACAGTTTAATTTTCTACTTGTCA
TACTCTTTGTTATCCTGATACGGGATGGCTGAGCAGAATCCCCGATTGGA
GCGTGTTCCGCGGAACGCGCCTAAAGTTTTTCCCATGTTAACATCCTTGA
ACCGTTGGATGACTATTCGTTTTTCGTTCTGCACAGGTCCGACAGCACAT
TACTCGTGACGCAAGGATGTACCCAGCGAAGGCCCGGCTGCAGGTGTGCG
CAGTTGTTACATATGACAGCGAACAGCAGCTAAAATCACTTTTGGGGGGG
ATTTTTCGCGAGACGAAGGCTTTAACTTCGCAGCGGAAATATATATATAT
TTTGATTTGAATCACCGTACTGTTGTCTTGGAACTGCCCGTTTATTTCTT
CCTTTCTCGTTTTTTTACTTTGTATTTTTTTATATCTGAAATCAAGGCAC
ATTACGGGCCCGGTCCAACACCGTAACTATAGTTGGATGGGTCGTGACTT
ATACTTGGTATTGTAGGGTATCGTAGGGCCGAACCAACGAACATGTACCT
TGTTTGAATTCCACCATTTCACCAAGCACAGCCACGGATTCAAGATGAAC
AAGTCAACGGTGTCTTGGCTTGGCCCTCATATTTCCGAAATATTCGTCGT
CCCTGTAGCACAGAGATAAAAATGAAGATTGATTGAATAACGTGAACTTC
TCTTTCGATTTCCATCCAAGGTTCAAGATCCAAATTTTTCCTCACTAGTA
TGAAATGTTGCCCTCGATCAAAGACGAAAACGGCTGTCTTTTTTTTTTTT
TTTTTTTTTTAATGGGTTACTTGTATGTTGTGAGATGTTGATAGTGAGAC
GTGGCAATCATTGTTTGAAGTGACGGTACCGTCCCCAATCCCCTGGGTTA
TGTAAATGTAGCCTCCATTGGAGTTGGAAGCGGCAAGCAAAAGCGTGCCG
CGCTCCCCCGCAGCTGTCAGACTTGCCTCAACCCAGGGCTGACGCTGAGA
GTACAGCAATAGCCAGCTAATACAAACTACCAGACCACTGAAAGGACTAC
AGCTACCACCCCAGCAGTATCATTCTGAGAGTACTGTACAGCATAGTTAG
TAACAGGACACAATAACCTAGTTGTGTGAGATAATCCGCAGGCCCAATTT
TAGTTATCGTCACATGTAGCTAGCTCTGCTGCAAAGCAACTGTAGCTAGC
GATTCAATAGCATGCCACACTGACCGTAATTGCGACTACAGGCTCGTCTG
TCTACAGACTTCCGCCCAACTAAATACAAAAACAGCGTCCCCGTCTCCTG
AATCATGTTCTGCGCTCGTGCTTCTTGGCTCGTGGGAGCGGGACAGGTTC
GAGACGACAAATATGTGGGCAAGCTGTTGGATCGGTATGGGTTGAGCGTG
GGGCAGGGCATGGCCACTTTCCTGTCCACGGGCAACATTACAAGCGCGTC
GGGGCTCGACCTCATGCAGGCAAGTTATTCAAGGACAGAGATGAATGCTT
TTAACAATTTGATAGCTTTAGAGTTTGAAAGAGTGATTGCTCGCTGGTGA
GCAAACGTAAGGTTTAAACAGTTTGATAGGGTGACGTTTCGAGAGACGGT
GTGTATGCGTGGGTAACTCGAATTCACCGTATTTTGTTTTTTGAGAGTAT
GGTGTTTAGGGGGGTGGAGGGAAATTCTGCTTAAAATCTTGAAGCTTCGA
TCGTCTTCACTAAAGACAGAAAAATGTCTTGACTTCTTTCACTTTTTATT
TTTTTTTCTCATTTTTTTTTCTTTTCTCTCTCTCTGTCCCTCTCCCTCTC
CCTCGCCAAATAATCAGGTGTCCGGCTTCACGATCGTGGCCGAGCGCATC
AATTTCCTCCGGTACCTGGCGCACTTCCGCAGCGTCCACCGAGGACAGTT
CTTCACCACCATGAAGACCACGGCAGTCAGGAAGCTTCTGCCCGAGTCTT
GGGGATTCCTCTGTCCGGTGCACACGCCCGACGGCTCTCCTTGCGGGCTG
CTTAACCACCTCGCCACGCAGTGCAGGGTGGTGACGGGAAGCGGAACGAA
GCCTCCGCCTCCTCAGGTAGGCAGGCCAGGGAGCGTGTCTTTTGTCTTGT
TTTATTTTTATTTTTAGCAGAGCAATGTTTGAGTAGGTGTTTGCTTTGTG
TTTTTGGTGATGGTGATTATATTTAATATTAAGCGATGATGATGATGGTG
ATAGTGTCGGTATATAGAGGTTATGTGTGATGGTGTGTGGGCTGTCGTTT
CGGAGCTGTACGAAGTGTGTGCGGCCCCCTTTTTGGGTCGGCACATTGTT
GTTGTTGTTGTTGTTGTTGTTGTTATTTTAGGGAAGGGGTTACAAGCTGT
GTTTAGAAGAAGACAACGTGTGTTATGTCCAAGGACTTGAGCCGTGTTTT
TTGCAAGGGAGCAGGCACAATTTGATTTGTAAATGTGTCACATATACTGC
CGGAGGACAAGTAGGGTACGATTGGCAGCCTCCCCCCTCCACCTTTCATC
CCTAGCCAGTTGTTTTTTGCAGTATCGTCTCGAAATTTGAGTGGTCATTT
TTTATTTCACGAAATATCTTTCTCCCATAATCTGTTCGACATCGAATTAT
TCTGTGACACTTGGAACAGCAAATAAGGTGGGCGTGAGAGCTCCTACTGG
TAAAGGGACAAAGACACACAGATAGCTGAAAAGCTGGTTATCTATCTTCT
CATTGACCGAAACGTGAAGCAGATATAGCCCTGCTACAAGCGAACGCCCA
AAATTCGCCAGTTACTATTCCACTGATTTTAGATTGCACGAGGATGCTTG
GTCGACGGCAATTTGGCCACCTGCCGTAGCGGCGTTTGCCTCTGCTATAT
CCCCTTATGACTTGCTTGTAAACACCCTCGCTTTACCCTATTTTACTTAC
GCGCTCACGTCGACTGGAAATGGAATAGTAGTCAAGTCAAATATGGAAGA
CTTTGAGCCATGGATAGATGATGACTAAATGGACCAAGTTCCCTCCTACA
CTCTTGGCAATATACGCTGTCAGTACTTGGTCCCTTTGCCCTCCCCCCAC
ATATTTGATGTAATTCGTTTTGGTGTGCACGGTTGAAAGTTGAGGTCAGG
CGCCTGAGGTCAGCGTGGGCGCGAGGAGTTATTTTATGAGCGTTTTTGAT
CTGCTAACTGTGGCAAGTGGGTTGGTTTGCATTTTAATGAGGTATTTTGA
GGTGTTTCCTTTGTGGTCGTTCGTGGGTGTAAAGGCTATTTCATGTTTCA
TACAGTACACGCGCGAGTGATACAGTGACTGAAGGTCGCAATCCACGTCG
TGCCTGGTCGAAGAGCTGAGAGAAGTCGTGGTTACCCTCGTTTTTCACTT
CTTGACCCCTTTCTTCCCTCCCCCTGCTTGATGTTTTCTTCTTGCTAATA
ATAATACATAGCAAACGAGATTTGAGGTTAACAACAAAATATCAACACGG
GCGCGATGGACTCGCTTCTCTATTCTGGTTCCTTGTCGAACTGTTCGGTT
GTTGATTCACACCTACAGCTTTGAAGCACAGTCTGCATCAAGCTGAATTC
CATGAGTGCTTACTATACTATATTTACATTGACATTCACCTGTAAATACA
TGTAGACAAGATTTGTCTGTTCCCATTCTAACCCCTCCTCGCTCCCCTCT
GCCTCCCCCCCTCTGCCTCCCCCCCTCCCACGCCCCCCCCCCTTCCCCCC
GCCGCCCCACCTTGCCTCCGTGTTCTGCCTGGTGTCGTCCATCTTCATAA
CCAACTGCATGATCGCATCTACGCGCGTCCGCGCGCGCGCGCGCGCGCAC
ACACACACACACACATACATTTGAAAAAAACGTACTGAAATACTTGCGTA
TTCATCTTCATAAAAAAAAAATGTTTCTCGTCGGTAACAAAAAAAACAAT
TGTTGATGAAAAAATGTTCCATCAACTGTTAAAAAAAATGTGAAAAAAAG
TCACCATCCTCGTTGGAGTCGATCCTCGTCTCGCTAGGCGTAACCCCCGC
AGGAACAGGGGCCGGGGACGGGTCCGCTAGCCTCCCGTACTACTTACTGC
CCGTGATGCTGAATGGCAGGGTCATCGGGGGCGGCAGCGTAGCCACGCTG
GCGCGCGCCGCGGCGGAGCTGCGGAGGCTTAAGGTAATGGGGGGGTGGGG
GGTCGGAGGGAAGGAGGAGGGCGGGGCGGGGACCGGGGGAGGTGTGCTCG
CTGCGGGAGCGGGGGGGGTGGACCCTACGTTGGAGGTGGGGTGGCTGCCT
CCGATGAAGGGTGGGGCGGGGCCTTACCCGGGGTTGTACTTGGCGTCCGA
GGGGGCGCGGTGAGTGGATAAGAGGGGGGGGGGGGTGGGGGGTAGAGACG
ATGTCTTCATTGATTATTTTTGTACATGTACTTGTAGGAGGGGTGGCTTC
GTGTTACTGTGCTGTGCTGTGCTGTGCTGTGGTCATTTCCCCCCCGGTAA
GTCATCTGTGGTGTTTTTTGGGTTTTGTGTGTATATATATGTGTGTGTGT
GTTTCGTTGTTGACGGTGCTTTCTGGTTTGTACCGCTCTGTGCTTTTTGA
CAACTGCGGCAGAATGTGTCGGCCAGTGATGCACCTTCCCACGGGAAGGT
TGGAATGGATTGGCCCGTTGGAGCAGCAGTTTATGGAGGTGCGCGCGAAG
TCGAGTTGACTTGCGTATTTGCTTCGTTTGGTGTCGTGTTACGTTCTGTT
AGATCCAGTTTCTGTGGGCAAGTTGCCTCATAGATATACTGTAGCGATGT
ATCATGGACATTGTGTGCCTCCATTTTTTGCGAGCGCAGTTAACGACCAA
CCATGCCCTGGAATAAAACTGGCTTCACTGGAGTATGACTGACTGGCCTG
GAGAGTGACTAACTGGACTGGAGTATGGTTGATTGCACTGGAATATGACT
GACTGCATTGGCGCAGCAGCCACATACAGTAGCTCTGCTGGTCTGCTACT
AAATACACTTGTAGTGTAAATACAAACCTTCTTTATTACTGTTTTGCGAC
GACAAACAGATTGCATGCCTCGCAGACGACGTAAGGGCGGGGCTGACGAC
GCACCGCGAGCTGGACCCGACCAACATGTTATCTCTTGTGGCTTCGTTGA
CCCCATTCTCCGACTATAACCAGAGCCCCAGGAATATGTATCAGGTACAG
TGCGGA

Coding sequence (CDS) from alignment at H-paniculata_contig3805:809..14914+

>mRNA_H-paniculata_contig3805.9978.1 ID=mRNA_H-paniculata_contig3805.9978.1|Name=mRNA_H-paniculata_contig3805.9978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3666bp|location=Sequence derived from alignment at H-paniculata_contig3805:809..14914+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGGGACCGGAGACACGCGGAGACTGCAGCGGCGCGCCGGAGACATGCC
CGTCATGGTAGGGTCTAAGAGGTGCCACCTGCAGGGTCACGGGCCGGCGC
AGCTCTGCAGAGGGCGGGAGGAGTCCGGGGAAATGGGGGGTTACTTTATC
GTTCGGGGCATCGAGAGGGTCATACGACTGTTGCAGGTTGGGACCGGAGA
CACGCGGAGACTGCAGCGGCGCGCCGGAGACATGCCCGTCATGGTAGGGT
CTAAGAGGTGCCACCTGCAGGGTCACGGGCCGGCGCAGCTCTGCAGAGGG
CGGGAGGAGTCCGGGGAAATGGGGGGTTACTTTATCGTTCGGGGCATCGA
GAGGGTCATACGACTGTTGCAGGTGCCGAAGAGGAACTACGCGCACGCAA
TCACGCGAGGAACATTCAAAGATCGAGGGACGGGCTACAGCGACATGGGG
GTGATGATGCGCTGTGGCCGCAAGGACTTGAGTACGGTGACTGTAACGGT
TCACTATATTACTACCGGGGGCTGCACTTTGAGGTTTGCCGTGAAGAAGC
AGGTGCCGAAGAGGAACTACGCGCACGCAATCACGCGAGGAACATTCAAA
GATCGAGGGACGGGCTACAGCGACATGGGGGTGATGATGCGCTGTGGCCG
CAAGGACTTGAGTACGGTGACTGTAACGGTTCACTATATTACTACCGGGG
GCTGCACTTTGAGGTTTGCCGTGAAGAAGCAGGAGTTCATGGTGCCCGTG
GTGATCGTTTTGAAGGCGTTACGAGATACCACGGACAGGGAGATTCATGA
GAGGTTGCTGCAAGGGCAGATGAAAAATACCTTCCTGGCGGCCCACGTCG
AGGAGTTCATGGTGCCCGTGGTGATCGTTTTGAAGGCGTTACGAGATACC
ACGGACAGGGAGATTCATGAGAGGTTGCTGCAAGGGCAGATGAAAAATAC
CTTCCTGGCGGCCCACGTCGAGGTCTTGTTGCGGGACGGAAAACGATGGG
GGTTGCACTCCAGGCAGGAATCGTTAGCCTTCCTGGGGACAACCTTTCGG
ACAGTGATGCAGGCGACGGCATCGACGACCGATGCCCAGATCGGGAAAAT
GGTTATTAACCGGTCTTGTTGCGGGACGGAAAACGATGGGGGTTGCACTC
CAGGCAGGAATCGTTAGCCTTCCTGGGGACAACCTTTCGGACAGTGATGC
AGGCGACGGCATCGACGACCGATGCCCAGATCGGGAAAATGGTTATTAAC
CGTTACATATTGGTCCACCTGAACCGACACAACGACAAGCAGGAGTGCAT
CCTGTTAATGCTCCGAAAGCTGTACGCGTTCGTGCAGGGTCGATGTAGGG
AAGACAAGCCCGACGCACTAGCCAATCACGAGCTGTTGCTCCCGGGACAC
CTGTACGGGATGATCATCAAGGAGAGGATGGAGAGCTGGCTGGAGAAGTT
ACATATTGGTCCACCTGAACCGACACAACGACAAGCAGGAGTGCATCCTG
TTAATGCTCCGAAAGCTGTACGCGTTCGTGCAGGGTCGATGTAGGGAAGA
CAAGCCCGACGCACTAGCCAATCACGAGCTGTTGCTCCCGGGACACCTGT
ACGGGATGATCATCAAGGAGAGGATGGAGAGCTGGCTGGAGAAGGTCCGA
CAGCACATTACTCGTGACGCAAGGATGTACCCAGCGAAGGCCCGGCTGCA
GGTCCGACAGCACATTACTCGTGACGCAAGGATGTACCCAGCGAAGGCCC
GGCTGCAGGTTCGAGACGACAAATATGTGGGCAAGCTGTTGGATCGGTAT
GGGTTGAGCGTGGGGCAGGGCATGGCCACTTTCCTGTCCACGGGCAACAT
TACAAGCGCGTCGGGGCTCGACCTCATGCAGGTTCGAGACGACAAATATG
TGGGCAAGCTGTTGGATCGGTATGGGTTGAGCGTGGGGCAGGGCATGGCC
ACTTTCCTGTCCACGGGCAACATTACAAGCGCGTCGGGGCTCGACCTCAT
GCAGGTGTCCGGCTTCACGATCGTGGCCGAGCGCATCAATTTCCTCCGGT
ACCTGGCGCACTTCCGCAGCGTCCACCGAGGACAGTTCTTCACCACCATG
AAGACCACGGCAGTCAGGAAGCTTCTGCCCGAGTCTTGGGGATTCCTCTG
TCCGGTGCACACGCCCGACGGCTCTCCTTGCGGGCTGCTTAACCACCTCG
CCACGCAGTGCAGGGTGGTGACGGGAAGCGGAACGAAGCCTCCGCCTCCT
CAGGTGTCCGGCTTCACGATCGTGGCCGAGCGCATCAATTTCCTCCGGTA
CCTGGCGCACTTCCGCAGCGTCCACCGAGGACAGTTCTTCACCACCATGA
AGACCACGGCAGTCAGGAAGCTTCTGCCCGAGTCTTGGGGATTCCTCTGT
CCGGTGCACACGCCCGACGGCTCTCCTTGCGGGCTGCTTAACCACCTCGC
CACGCAGTGCAGGGTGGTGACGGGAAGCGGAACGAAGCCTCCGCCTCCTC
AGTCACCATCCTCGTTGGAGTCGATCCTCGTCTCGCTAGGCGTAACCCCC
GCAGGAACAGGGGCCGGGGACGGGTCCGCTAGCCTCCCGTACTACTTACT
GCCCGTGATGCTGAATGGCAGGGTCATCGGGGGCGGCAGCGTAGCCACGC
TGGCGCGCGCCGCGGCGGAGCTGCGGAGGCTTAAGGTAATGGGGGGGTGG
GGGGTCGGAGGGAAGGAGGAGGGCGGGGCGGGGACCGGGGGAGGTGTGCT
CGCTGCGGGAGCGGGGGGGGTGGACCCTACGTTGGAGGTGGGGTGGCTGC
CTCCGATGAAGGGTGGGGCGGGGCCTTACCCGGGGTTGTACTTGGCGTCC
GAGGGGGCGCGTCACCATCCTCGTTGGAGTCGATCCTCGTCTCGCTAGGC
GTAACCCCCGCAGGAACAGGGGCCGGGGACGGGTCCGCTAGCCTCCCGTA
CTACTTACTGCCCGTGATGCTGAATGGCAGGGTCATCGGGGGCGGCAGCG
TAGCCACGCTGGCGCGCGCCGCGGCGGAGCTGCGGAGGCTTAAGGTAATG
GGGGGGTGGGGGGTCGGAGGGAAGGAGGAGGGCGGGGCGGGGACCGGGGG
AGGTGTGCTCGCTGCGGGAGCGGGGGGGGTGGACCCTACGTTGGAGGTGG
GGTGGCTGCCTCCGATGAAGGGTGGGGCGGGGCCTTACCCGGGGTTGTAC
TTGGCGTCCGAGGGGGCGCGAATGTGTCGGCCAGTGATGCACCTTCCCAC
GGGAAGGTTGGAATGGATTGGCCCGTTGGAGCAGCAGTTTATGGAGAATG
TGTCGGCCAGTGATGCACCTTCCCACGGGAAGGTTGGAATGGATTGGCCC
GTTGGAGCAGCAGTTTATGGAGATTGCATGCCTCGCAGACGACGTAAGGG
CGGGGCTGACGACGCACCGCGAGCTGGACCCGACCAACATGTTATCTCTT
GTGGCTTCGTTGACCCCATTCTCCGACTATAACCAGAGCCCCAGGAATAT
GTATCAGGTACAGTGCGGAATTGCATGCCTCGCAGACGACGTAAGGGCGG
GGCTGACGACGCACCGCGAGCTGGACCCGACCAACATGTTATCTCTTGTG
GCTTCGTTGACCCCATTCTCCGACTATAACCAGAGCCCCAGGAATATGTA
TCAGGTACAGTGCGGA