prot_H-paniculata_contig38.9963.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38.9963.1
Unique Nameprot_H-paniculata_contig38.9963.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length389
Homology
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BLAST of mRNA_H-paniculata_contig38.9963.1 vs. uniprot
Match: D7FNK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK4_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.570e-91
Identity = 200/434 (46.08%), Postives = 259/434 (59.68%), Query Frame = 0 
Query:    1 MASLYLVLSDPTSALKNFQIALKPSPGEFGVLTQQEKDKEEVQNRKLMLLDETGRAQALTVLRAEEVERKREQAQSEAARRKKAATGIYQCLLEMKEPVAAAQAARVRLRMCNGEAADDERIQVRKEIHETLLRFQGLIESEATNQGAWLTESAGVLIDLHTSVLQSLCGKASHASPCCQPSQSDITRARSITMDA--DAETNS----IRLDR---------------ADGQKERCLSAGGSAVLESTLSQRDNETVGMDVNRGES---------------LERGRTTDNEQGR-----RLRDLGRMLAYKRQFAASRKAFEDALQGGPEEEYLRERRRCHTKGSYFDMALSEASTVMQLGIVSRWQGGVGADETRRRNLFDHTGFTGVHHGAETLVTSMPPTGWATG----MSDLQYADRLSRAKTVVQPLQE 389
            +A LYLVLSD   ALK+FQ+A KPSP    V T++E DK E+Q R+LMLL++  RA+AL  L A++ ER+RE+  +E ARR+KAATG+Y+CLLEMK+PV AA+AAR RL MC      +ER QV  EIHETLL++ GLIE EATNQGAWLTESAG L DLH  VL+SL G + H      PS    T +    M+A  D E  S    + ++                ADG +   L  GG + L    +       G   +RG +               +   R  + E+ R     RL+DLG +L  KRQF ASR+AF+DA +GGP+E  LRER +  T G + D AL EAS  ++L + SRWQGGV  D+ RRR L + TGFTG+H GAETLV  +P  GWA G     S++ YA+RLSR++  V  LQ+
Sbjct:   24 LALLYLVLSDQRGALKSFQLAAKPSPER--VPTKEETDKREMQERRLMLLNKDRRAEALAQLEAQDAEREREREATEHARRRKAATGVYRCLLEMKQPVQAAEAARARLDMCE---TREERQQVETEIHETLLKYDGLIEPEATNQGAWLTESAGALSDLHADVLRSLTGFSMHEKS-ASPSSCWGTSSSGGAMEAVDDPEEGSCAPGMEINHRGGGVETTGRAVGVSADGYRGNNLLEGGDSTLTKEGAFSATVCEGAGSSRGYTCGGNGPRDVAATTAEVAPDRMNNAEEERDVRRSRLQDLGHLLVRKRQFTASRQAFDDARRGGPDEASLRERNKGRTPGFFIDGALEEASPKIRLELDSRWQGGVETDDIRRRALANFTGFTGLHRGAETLVAVVPAAGWADGGNAIASEIAYAERLSRSRIQVDSLQQ 451
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38.9963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNK4_ECTSI1.570e-9146.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 62..84
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..389
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38contigH-paniculata_contig38:40613..42960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38.9963.1mRNA_H-paniculata_contig38.9963.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38 40601..42960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38.9963.1 ID=prot_H-paniculata_contig38.9963.1|Name=mRNA_H-paniculata_contig38.9963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=389bp
MASLYLVLSDPTSALKNFQIALKPSPGEFGVLTQQEKDKEEVQNRKLMLL
DETGRAQALTVLRAEEVERKREQAQSEAARRKKAATGIYQCLLEMKEPVA
AAQAARVRLRMCNGEAADDERIQVRKEIHETLLRFQGLIESEATNQGAWL
TESAGVLIDLHTSVLQSLCGKASHASPCCQPSQSDITRARSITMDADAET
NSIRLDRADGQKERCLSAGGSAVLESTLSQRDNETVGMDVNRGESLERGR
TTDNEQGRRLRDLGRMLAYKRQFAASRKAFEDALQGGPEEEYLRERRRCH
TKGSYFDMALSEASTVMQLGIVSRWQGGVGADETRRRNLFDHTGFTGVHH
GAETLVTSMPPTGWATGMSDLQYADRLSRAKTVVQPLQE
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