prot_H-paniculata_contig379.9941.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig379.9941.1
Unique Nameprot_H-paniculata_contig379.9941.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length174
Homology
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BLAST of mRNA_H-paniculata_contig379.9941.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 6.350e-24
Identity = 73/151 (48.34%), Postives = 93/151 (61.59%), Query Frame = 0 
Query:   15 EGRTLKKSSTLPTMPKVSLLAPVGQRPKAGRKSVQFQV------------------PDNEGLDSDNSDSPQPEFLSNPDIRFEVVSTDRASMTEVLNQLRGALKRAT-NTENGFTASSES-----SASAT------LSRMRPSRPGGRSVT 135
            E R +KK++TLP MP+VSLL P   RPK GRKSVQFQV                  P+NEGLDSD +DSP PEFLSNPD+RFEV   DRA++   L +LR ALK+AT ++E+ FT S  +     +A+A       +SRM  S P G +V+
Sbjct:  558 EARLMKKAATLPAMPRVSLLLP-SNRPKGGRKSVQFQVGIMRCDRVVVQCTATAVVPENEGLDSDTTDSPLPEFLSNPDVRFEVAPGDRAALRAALERLRDALKQATISSESSFTISRSAPGLMPTANAVALSGMRMSRMSASSPSGGTVS 707
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BLAST of mRNA_H-paniculata_contig379.9941.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 4.090e-21
Identity = 56/102 (54.90%), Postives = 70/102 (68.63%), Query Frame = 0 
Query:   15 EGRTLKKSSTLPTMPKVSLLAPVGQ---RPKAGRKSVQFQVPDNEGLDSDNSDSPQPEFLSNPDIRFEVVSTDRASMTEVLNQLRGALKRAT-NTENGFTAS 112
            + R   K+S +     + ++    Q   RPK GRKSVQFQVP+NEGLDSD +DSP PEFLSNPD+RFEV   DRA++   L QLR ALKRAT ++E+ FT S
Sbjct:  133 QAREQAKASRITRAASIDMIGSASQDFKRPKGGRKSVQFQVPENEGLDSDTTDSPLPEFLSNPDVRFEVTPGDRAALRAALEQLRDALKRATISSESSFTIS 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig379.9941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LG27_9PHAE6.350e-2448.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB0_ECTSI4.090e-2154.90NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig379contigH-paniculata_contig379:767..5809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig379.9941.1mRNA_H-paniculata_contig379.9941.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig379 766..5809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig379.9941.1 ID=prot_H-paniculata_contig379.9941.1|Name=mRNA_H-paniculata_contig379.9941.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
PGEGGGGGGVGIGGEGRTLKKSSTLPTMPKVSLLAPVGQRPKAGRKSVQF
QVPDNEGLDSDNSDSPQPEFLSNPDIRFEVVSTDRASMTEVLNQLRGALK
RATNTENGFTASSESSASATLSRMRPSRPGGRSVTTSTQNSSSAASLAMG
IGAGVADREVWGSGSSAGGGGGVV
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