mRNA_H-paniculata_contig11555.994.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11555.994.1
Unique NamemRNA_H-paniculata_contig11555.994.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A034V8I0_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034V8I0_BACDO)

HSP 1 Score: 223 bits (569), Expect = 3.280e-64
Identity = 127/325 (39.08%), Postives = 186/325 (57.23%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREK--VDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDCG-RRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            V RL K++YGLKQS + W+  LDN+L  IG      + CLY    +G     L+ VYVDD++IA C+ K  +++ K  +S  F   D G L   LGI++  +   G I ISQ +Y++++L+R+G+ +CR   TP++    I   +   +R   +EY+ +IG LMY S  TRPDI +   + A+R  DP  E  +  KHI  YL++  D+ + +   + G  ++GFVDADW  D  DRKS   Y   L+G  I+W S+KQQ V   STEA+YVA  E  KE ++LR +L  IG   +  T ++ DN SA +LS     H R+  +D
Sbjct:  244 VLRLNKAIYGLKQSGKEWNEKLDNVLKSIGYVPCVNEPCLYKRNLEGNIS--LIAVYVDDMIIA-CKTKKEIEKVKAQISNIFDCVDKGQLRYFLGIKVERNGELGAIHISQSQYIKDILQRHGMTQCRTAATPLDAGFTIGCKNTTCKRVEISEYQSLIGELMYLSVCTRPDIMHSVSKLAQRNADPHTEHVAGVKHILRYLASTADLKLRY--SACGKPVQGFVDADWGNDMMDRKSFSGYAFVLSGSAITWQSKKQQTVALSSTEAEYVALAEGVKEALFLRNLLNEIGCEQQEPTIIYGDNLSAQHLSKNQMFHGRSKHID 563          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 218 bits (554), Expect = 4.460e-64
Identity = 117/324 (36.11%), Postives = 186/324 (57.41%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAG-CREKVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLK-ISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            V +L KS YGLKQS+R W++ LD  L  IG     +D C+Y   +DG     +V ++VDD+++AG   EK+ + K ++++ F+V D+G L  +LG+++   +  G + I Q  Y   ++K+YG++ C+ V TPV+   K +SA +     N  EY+  +GSL+Y S+ TRPDI +     A+   +   E ++  K IF YL    + G+ +   +N   + GF DADWA D  DRKST  Y  ++NG  +SW S+KQ  V   + EA+YVA   A +E +++R++L  +        T++EDN+SAI +S     H R+  +D
Sbjct:   13 VCKLNKSRYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDIF--VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHID 331          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 217 bits (552), Expect = 3.040e-63
Identity = 118/330 (35.76%), Postives = 193/330 (58.48%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREKVDEF-KHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDC--GRRDNST----EYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            V +L +SLYGLKQS R W+ ++D+ ++ +G +   +D C+Y  RD G+++ + V +YVDDLV+A   +++ E  KH +S+ F + DLG L   LG+E++  R +G +T+ Q ++++ +L ++G+ + + V TP +  LK++   C  G +   T     YR ++G+LMY    TRPD+A      ++   DPC   +   K +  YL   P  G+ F  + +  G+ G+ DADWA D + R+ST  Y   +NGG ISW S+KQ+ V   STEA+Y+A  EA +E V+L+  L  +G      +  ++EDN+ +I L+     H RT  +D
Sbjct:   33 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD-GQDM-IFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHID 359          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 228 bits (580), Expect = 5.760e-63
Identity = 128/329 (38.91%), Postives = 196/329 (59.57%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSR---DDGREIDLLVTVYVDDLV-IAGCREKVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKI-SAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLDCA 972
            V +L KSLYGLKQS R W+++LD+ L   G +    DSCLY       +G+   ++++++VDD++  +     ++E K  +   F+V DLG ++ +LG+ ++ DR + T+TISQ +Y+  VLKR+ ++EC+ V TP+E   +     D  R  N  EY+ +IG L Y +T TRPD+A      ++ M  P  E +   K I  Y+    + GITF  K     L G+ DADWA D + R+ST  Y+ +++G TISWCS+KQ  V+  STEA+Y+A   A +E ++LR++L +IG   + ST + EDN++AI LS     H RT  +D A
Sbjct:  975 VCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVA 1303          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI)

HSP 1 Score: 225 bits (573), Expect = 4.700e-62
Identity = 116/321 (36.14%), Postives = 183/321 (57.01%), Query Frame = 1
Query:    7 RLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCRE-KVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            +L KSLYGLKQ+++ W    DN +  +GLE   +D CLY   ++     + + +YVDD++IAG    K+ E K  + + F + D G L   LG+++  D+  G + I+Q +Y+ +VLK++ +D C  + TP+E KL I   +  +++ +  YR ++GSLMYA  G+RPD++Y      R    P    ++  K +  Y+    + G+ F  +SN   L GFVDADWA    DRKST  Y+ K+    +SW +++Q  V   STEA+Y+A   A  E +++RK+L  +     G   LFEDN+ AI+LS+    H R+  +D
Sbjct:  913 KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDN--KQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHID 1231          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 225 bits (573), Expect = 5.070e-62
Identity = 127/329 (38.60%), Postives = 190/329 (57.75%), Query Frame = 1
Query:    7 RLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREK--VDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDC--GRRDNST----EYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGC-RGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            +L ++LYGLKQS R W+ ++D  +  IG      D C+Y  R+D     + V +YVDDL++A C  K  +   K  +S+ F ++DLG L   LG+E++ D  +G +++ Q ++V+ VL ++G+ +C+ V TP +  LK++   C  G + + T     YR  +G+LMY   GTRPD+A      ++   DPC   +   K +  YL   P  GI F G S+G  L G+ DADWA D + R+ST  YV  LNGG ISW S+KQ+ V   STEA+Y+A  EA +E V+L+  +  +G     G+ T+FEDN+ AI L+     H RT  +D
Sbjct: 1008 KLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSAT--MFVVIYVDDLILA-CNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHID 1332          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A811VIA7_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811VIA7_CERCA)

HSP 1 Score: 223 bits (568), Expect = 1.250e-61
Identity = 124/325 (38.15%), Postives = 189/325 (58.15%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREKVD--EFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAP-DCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            V RL K++YGLKQS + W+ +LDN+L  IG E   ++ CLY  R    +I L + VYVDDL+IA C+ + +  E K  +S  F+  D G L   LGI++  +   G   +SQ +Y++++L+R+G+ +CR   TP+++   +    D  RR    +Y+ +IG LMY +  TRPDI +   + A+   DP  E  +  KHI  YL++  ++ + +  + +G  + GF DADW  D  DRKS   Y   L G  ISW S+KQ+ V   STEA+Y+A  E  KE+++LR +L  IG+  +  TT++ DN SA +LS     H R+  +D
Sbjct:  684 VLRLNKAIYGLKQSGKEWNATLDNVLKSIGYEPCVSEPCLY-KRKVKHDISL-IAVYVDDLIIA-CKSESELHEVKSKISSSFKCVDKGKLHYFLGIKVEREGDLGAFHMSQSQYIKDILQRHGMTQCRSAATPLDKSFVVDCNNDTCRRAEQLKYQSLIGELMYLALCTRPDIMHSVCKLAQLNSDPHVEHEAGLKHILRYLASTTELKLCY--RESGKSIVGFTDADWGNDLTDRKSFSGYAFFLGGSAISWQSKKQRTVALSSTEAEYIALAEGVKESLFLRNLLEEIGYEQQKQTTIYSDNLSAQHLSMNQLFHGRSKHID 1003          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: J9M5U1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9M5U1_ACYPI)

HSP 1 Score: 223 bits (569), Expect = 1.880e-61
Identity = 115/323 (35.60%), Postives = 183/323 (56.66%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCRE-KVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            + +L KSLYGLKQ+++ W    DN +  +GL+   +D CLY   ++     + + +YVDD++IAG    K+ E K  + + F + D G L   LG+++  D+  G + I+Q +Y+ +VLK++ +D C  + TP+E KL I   +  +++ +  YR ++GSLMYA  G+RPD++Y      R    P    ++  K +  Y     + G+ F  +SN   L GFVDADWA    DRKST  Y+ K+    +SW +++Q  V   STEA+Y+A   A  E +++RK+L  +     G   LFEDN+ AI+LS+    H R+  +D
Sbjct: 1620 ILKLNKSLYGLKQASKCWHERFDNYIAKLGLKQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDN--KQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYFKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHID 1940          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 218 bits (554), Expect = 1.940e-61
Identity = 115/322 (35.71%), Postives = 185/322 (57.45%), Query Frame = 1
Query:    7 RLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAG-CREKVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLK-ISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            +L KSLYGLKQS+R W++ LD  L  IG     +D C+Y   +DG     +V ++VDD+++AG   EK+ + K ++++ F+V D+G L  +LG+++   +    + I Q  Y   ++K+YG++ C+ V TPV+   K +SA +     N  E++  +GSL+Y S+ TRPDI +     A+   +P  E ++  K IF YL    + G+ +   +N   + GF DADWA D  DRKST  Y  ++NG  +SW S+KQ  V   +  A+YVA   A +E +++R++L  +        T++EDN+SAI +S     H R+  +D
Sbjct:  290 KLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNIF--VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHID 606          
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: H3H925_PHYRM (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H925_PHYRM)

HSP 1 Score: 218 bits (554), Expect = 2.620e-61
Identity = 119/330 (36.06%), Postives = 192/330 (58.18%), Query Frame = 1
Query:    1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREKV-DEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDC--GRRDNST----EYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966
            V +L +SLYGLKQS R W+ ++D+ ++ +G +   +D C+Y  RD G+++ + V +YVDDLV+A   +++ +  KH +S+ F + DLG L   LG+E++ D  +G +T+ Q ++++ +L ++G+ + + V TP +  LK++   C  G +   T     YR  IG+LMY    TRPD+A      ++   DPC   +   K +  YL   P  G+ F  + +  G+ G+ DADWA D K R+ST  Y   +NGG ISW S+KQ+ V   STEA+Y+A  EA +E V+L+  L  +G      +  ++EDN+ +I L+     H RT  +D
Sbjct:  346 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD-GQDM-IFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAIGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-QEDSVGMCGYSDADWAGDTKSRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHID 672          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A034V8I0_BACDO3.280e-6439.08Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9M6E1_PARCT4.460e-6436.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB98_PHYRM3.040e-6335.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IUY0_PARCT5.760e-6338.91Retrovirus-related Pol poly from transposon TNT 1-... [more]
J9KJ72_ACYPI4.700e-6236.14Integrase catalytic domain-containing protein n=1 ... [more]
A0A8K1FHK1_PYTOL5.070e-6238.60Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]
A0A811VIA7_CERCA1.250e-6138.15(Mediterranean fruit fly) hypothetical protein n=1... [more]
J9M5U1_ACYPI1.880e-6135.60Uncharacterized protein n=1 Tax=Acyrthosiphon pisu... [more]
A0A7D9HZ03_PARCT1.940e-6135.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H925_PHYRM2.620e-6136.06Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11555contigH-paniculata_contig11555:2535..3709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score171.4
Seed ortholog evalue5.6e-40
Seed eggNOG ortholog160860.XP_007353053.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs227R3@155619,38DPC@33154,3H58M@355688,3NUZ7@4751,3UY7N@5204,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons2
Model size1097
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11555.994.1prot_H-paniculata_contig11555.994.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11555 2615..3481 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928859.9664817-UTR-H-paniculata_contig11555:2534..26141622928859.9664817-UTR-H-paniculata_contig11555:2534..2614Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11555 2535..2614 -
1691480648.7024062-UTR-H-paniculata_contig11555:2534..26141691480648.7024062-UTR-H-paniculata_contig11555:2534..2614Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11555 2535..2614 -
1622928860.0221431-UTR-H-paniculata_contig11555:3481..37091622928860.0221431-UTR-H-paniculata_contig11555:3481..3709Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11555 3482..3709 -
1691480648.7375526-UTR-H-paniculata_contig11555:3481..37091691480648.7375526-UTR-H-paniculata_contig11555:3481..3709Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11555 3482..3709 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928859.979102-CDS-H-paniculata_contig11555:2614..32031622928859.979102-CDS-H-paniculata_contig11555:2614..3203Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11555 2615..3203 -
1691480648.7184706-CDS-H-paniculata_contig11555:2614..32031691480648.7184706-CDS-H-paniculata_contig11555:2614..3203Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11555 2615..3203 -
1622928859.9952505-CDS-H-paniculata_contig11555:3281..34811622928859.9952505-CDS-H-paniculata_contig11555:3281..3481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11555 3282..3481 -
1691480648.729528-CDS-H-paniculata_contig11555:3281..34811691480648.729528-CDS-H-paniculata_contig11555:3281..3481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11555 3282..3481 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11555.994.1

>prot_H-paniculata_contig11555.994.1 ID=prot_H-paniculata_contig11555.994.1|Name=mRNA_H-paniculata_contig11555.994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDEC
RGVPTPVERKLKISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQ
QAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDAD
WAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGK
ETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLDCAGT
EFKSGFGKEYWR*
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mRNA from alignment at H-paniculata_contig11555:2535..3709-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11555.994.1 ID=mRNA_H-paniculata_contig11555.994.1|Name=mRNA_H-paniculata_contig11555.994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1175bp|location=Sequence derived from alignment at H-paniculata_contig11555:2535..3709- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCGCCGCCTGGGTAAAAGCCTGTACGGCCTCAAGCAGAGCAACCGAAA CTGGGATAACTCTCTTGACAATATTCTTGTTGTGATAGGACTCGAACATT TCACTACCGACTCATGCTTGTACTTCTCTCGCGACGATGGGAGAGAGATA GACCTTCTGGTGACCGTCTATGTTGACGACCTGGTCATCGCTGGCTGTCG TGAGAAAGTAGACGAGTTCAAGCATAACATGAGTCAGTGTTTTAGGGTGA ACGACTTGGGCTCTCTCGCGCGCGTGTTGGGAATAGAATTACGGTGTGAC CGCCCTACTGGTACCATAACCATCTCGCAGGGTAGGTACGTCCGCGAGGT ACTAAAGAGATACGGGGTTGACGAGTGTCGAGGGGTACCCACCCCTGTAG AGAGAAAATTGAAGATTTCGGCACCCGAGTCGGCCGACAAGCCCTACGAA CCGAAGTCACTTGGGGCTGTACTGTCGGACATAGGCGCAGGAGTACAAGA GAGCAGCTGCGGGAGACGTGACAATTCAACTGAGTACAGAGGCATGATAG GATCACTCATGTACGCCTCGACAGGAACTAGACCTGATATAGCATACGTG GAACAACAAGCAGCACGTCGTATGGACGATCCATGTGGGGAAGACTTCAG TACATGCAAGCACATTTTTCATTATCTCAGTACTGTGCCTGACATCGGCA TTACGTTCGGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGAT GCCGATTGGGCGGAAGATGCCAAGGACCGAAAGTCCACAATAGAATACGT TCTCAAACTAAACGGTGGTACGATAAGTTGGTGCTCTAGGAAGCAACAGT TAGTCACGTGGTGCAGCACAGAGGCAGACTACGTTGCTGCAGGAGAAGCG GGGAAGGAGACGGTATATCTTAGGAAAATACTAGGATCGATAGGTTTCGG ATGCAGGGGGAGCACGACATTATTTGAGGACAACGAGTCGGCTATTAATC TCAGTACGGGATCTGGCGCACATTGCAGGACAAACACATTGGATTGCGCT GGCACGGAATTCAAGAGTGGGTTCGGGAAGGAATATTGGCGTTGAAATAC GTGCAGACCGGCGACCAATTTGCTGACATTTTAACGAAAGGACTGAGCAG AGTCAAGTTTCAGATACTGAGAAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig11555:2535..3709-

>mRNA_H-paniculata_contig11555.994.1 ID=mRNA_H-paniculata_contig11555.994.1|Name=mRNA_H-paniculata_contig11555.994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig11555:2535..3709- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTCAGTGTTTTAGGGTGAACGACTTGGGCTCTCTCGCGCGCGTGTT
GGGAATAGAATTACGGTGTGACCGCCCTACTGGTACCATAACCATCTCGC
AGGGTAGGTACGTCCGCGAGGTACTAAAGAGATACGGGGTTGACGAGTGT
CGAGGGGTACCCACCCCTGTAGAGAGAAAATTGAAGATTTCGGCACCCGA
ATGAGTCAGTGTTTTAGGGTGAACGACTTGGGCTCTCTCGCGCGCGTGTT
GGGAATAGAATTACGGTGTGACCGCCCTACTGGTACCATAACCATCTCGC
AGGGTAGGTACGTCCGCGAGGTACTAAAGAGATACGGGGTTGACGAGTGT
CGAGGGGTACCCACCCCTGTAGAGAGAAAATTGAAGATTTCGGCACCCGA
CTGCGGGAGACGTGACAATTCAACTGAGTACAGAGGCATGATAGGATCAC
TCATGTACGCCTCGACAGGAACTAGACCTGATATAGCATACGTGGAACAA
CAAGCAGCACGTCGTATGGACGATCCATGTGGGGAAGACTTCAGTACATG
CAAGCACATTTTTCATTATCTCAGTACTGTGCCTGACATCGGCATTACGT
TCGGCGGTAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGCCGAT
TGGGCGGAAGATGCCAAGGACCGAAAGTCCACAATAGAATACGTTCTCAA
ACTAAACGGTGGTACGATAAGTTGGTGCTCTAGGAAGCAACAGTTAGTCA
CGTGGTGCAGCACAGAGGCAGACTACGTTGCTGCAGGAGAAGCGGGGAAG
GAGACGGTATATCTTAGGAAAATACTAGGATCGATAGGTTTCGGATGCAG
GGGGAGCACGACATTATTTGAGGACAACGAGTCGGCTATTAATCTCAGTA
CGGGATCTGGCGCACATTGCAGGACAAACACATTGGATTGCGCTGGCACG
GAATTCAAGAGTGGGTTCGGGAAGGAATATTGGCGTTGACTGCGGGAGAC
GTGACAATTCAACTGAGTACAGAGGCATGATAGGATCACTCATGTACGCC
TCGACAGGAACTAGACCTGATATAGCATACGTGGAACAACAAGCAGCACG
TCGTATGGACGATCCATGTGGGGAAGACTTCAGTACATGCAAGCACATTT
TTCATTATCTCAGTACTGTGCCTGACATCGGCATTACGTTCGGCGGTAAG
AGTAATGGTCACGGTCTGGAAGGATTCGTTGATGCCGATTGGGCGGAAGA
TGCCAAGGACCGAAAGTCCACAATAGAATACGTTCTCAAACTAAACGGTG
GTACGATAAGTTGGTGCTCTAGGAAGCAACAGTTAGTCACGTGGTGCAGC
ACAGAGGCAGACTACGTTGCTGCAGGAGAAGCGGGGAAGGAGACGGTATA
TCTTAGGAAAATACTAGGATCGATAGGTTTCGGATGCAGGGGGAGCACGA
CATTATTTGAGGACAACGAGTCGGCTATTAATCTCAGTACGGGATCTGGC
GCACATTGCAGGACAAACACATTGGATTGCGCTGGCACGGAATTCAAGAG
TGGGTTCGGGAAGGAATATTGGCGTTGA
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