mRNA_H-paniculata_contig11555.994.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A034V8I0_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034V8I0_BACDO) HSP 1 Score: 223 bits (569), Expect = 3.280e-64 Identity = 127/325 (39.08%), Postives = 186/325 (57.23%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREK--VDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDCG-RRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 V RL K++YGLKQS + W+ LDN+L IG + CLY +G L+ VYVDD++IA C+ K +++ K +S F D G L LGI++ + G I ISQ +Y++++L+R+G+ +CR TP++ I + +R +EY+ +IG LMY S TRPDI + + A+R DP E + KHI YL++ D+ + + + G ++GFVDADW D DRKS Y L+G I+W S+KQQ V STEA+YVA E KE ++LR +L IG + T ++ DN SA +LS H R+ +D Sbjct: 244 VLRLNKAIYGLKQSGKEWNEKLDNVLKSIGYVPCVNEPCLYKRNLEGNIS--LIAVYVDDMIIA-CKTKKEIEKVKAQISNIFDCVDKGQLRYFLGIKVERNGELGAIHISQSQYIKDILQRHGMTQCRTAATPLDAGFTIGCKNTTCKRVEISEYQSLIGELMYLSVCTRPDIMHSVSKLAQRNADPHTEHVAGVKHILRYLASTADLKLRY--SACGKPVQGFVDADWGNDMMDRKSFSGYAFVLSGSAITWQSKKQQTVALSSTEAEYVALAEGVKEALFLRNLLNEIGCEQQEPTIIYGDNLSAQHLSKNQMFHGRSKHID 563
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT) HSP 1 Score: 218 bits (554), Expect = 4.460e-64 Identity = 117/324 (36.11%), Postives = 186/324 (57.41%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAG-CREKVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLK-ISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 V +L KS YGLKQS+R W++ LD L IG +D C+Y +DG +V ++VDD+++AG EK+ + K ++++ F+V D+G L +LG+++ + G + I Q Y ++K+YG++ C+ V TPV+ K +SA + N EY+ +GSL+Y S+ TRPDI + A+ + E ++ K IF YL + G+ + +N + GF DADWA D DRKST Y ++NG +SW S+KQ V + EA+YVA A +E +++R++L + T++EDN+SAI +S H R+ +D Sbjct: 13 VCKLNKSRYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGDIF--VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHID 331
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM) HSP 1 Score: 217 bits (552), Expect = 3.040e-63 Identity = 118/330 (35.76%), Postives = 193/330 (58.48%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREKVDEF-KHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDC--GRRDNST----EYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 V +L +SLYGLKQS R W+ ++D+ ++ +G + +D C+Y RD G+++ + V +YVDDLV+A +++ E KH +S+ F + DLG L LG+E++ R +G +T+ Q ++++ +L ++G+ + + V TP + LK++ C G + T YR ++G+LMY TRPD+A ++ DPC + K + YL P G+ F + + G+ G+ DADWA D + R+ST Y +NGG ISW S+KQ+ V STEA+Y+A EA +E V+L+ L +G + ++EDN+ +I L+ H RT +D Sbjct: 33 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD-GQDM-IFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHID 359
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 228 bits (580), Expect = 5.760e-63 Identity = 128/329 (38.91%), Postives = 196/329 (59.57%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSR---DDGREIDLLVTVYVDDLV-IAGCREKVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKI-SAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLDCA 972 V +L KSLYGLKQS R W+++LD+ L G + DSCLY +G+ ++++++VDD++ + ++E K + F+V DLG ++ +LG+ ++ DR + T+TISQ +Y+ VLKR+ ++EC+ V TP+E + D R N EY+ +IG L Y +T TRPD+A ++ M P E + K I Y+ + GITF K L G+ DADWA D + R+ST Y+ +++G TISWCS+KQ V+ STEA+Y+A A +E ++LR++L +IG + ST + EDN++AI LS H RT +D A Sbjct: 975 VCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNMEECKPVSTPLEPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVA 1303
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 225 bits (573), Expect = 4.700e-62 Identity = 116/321 (36.14%), Postives = 183/321 (57.01%), Query Frame = 1 Query: 7 RLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCRE-KVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 +L KSLYGLKQ+++ W DN + +GLE +D CLY ++ + + +YVDD++IAG K+ E K + + F + D G L LG+++ D+ G + I+Q +Y+ +VLK++ +D C + TP+E KL I + +++ + YR ++GSLMYA G+RPD++Y R P ++ K + Y+ + G+ F +SN L GFVDADWA DRKST Y+ K+ +SW +++Q V STEA+Y+A A E +++RK+L + G LFEDN+ AI+LS+ H R+ +D Sbjct: 913 KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDN--KQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHID 1231
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL) HSP 1 Score: 225 bits (573), Expect = 5.070e-62 Identity = 127/329 (38.60%), Postives = 190/329 (57.75%), Query Frame = 1 Query: 7 RLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREK--VDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDC--GRRDNST----EYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGC-RGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 +L ++LYGLKQS R W+ ++D + IG D C+Y R+D + V +YVDDL++A C K + K +S+ F ++DLG L LG+E++ D +G +++ Q ++V+ VL ++G+ +C+ V TP + LK++ C G + + T YR +G+LMY GTRPD+A ++ DPC + K + YL P GI F G S+G L G+ DADWA D + R+ST YV LNGG ISW S+KQ+ V STEA+Y+A EA +E V+L+ + +G G+ T+FEDN+ AI L+ H RT +D Sbjct: 1008 KLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRNDSAT--MFVVIYVDDLILA-CNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTKSMCEGGCKHDETMKDVPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSGNGALTVFEDNQGAIALAKNPEFHKRTKHID 1332
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A811VIA7_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811VIA7_CERCA) HSP 1 Score: 223 bits (568), Expect = 1.250e-61 Identity = 124/325 (38.15%), Postives = 189/325 (58.15%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREKVD--EFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAP-DCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 V RL K++YGLKQS + W+ +LDN+L IG E ++ CLY R +I L + VYVDDL+IA C+ + + E K +S F+ D G L LGI++ + G +SQ +Y++++L+R+G+ +CR TP+++ + D RR +Y+ +IG LMY + TRPDI + + A+ DP E + KHI YL++ ++ + + + +G + GF DADW D DRKS Y L G ISW S+KQ+ V STEA+Y+A E KE+++LR +L IG+ + TT++ DN SA +LS H R+ +D Sbjct: 684 VLRLNKAIYGLKQSGKEWNATLDNVLKSIGYEPCVSEPCLY-KRKVKHDISL-IAVYVDDLIIA-CKSESELHEVKSKISSSFKCVDKGKLHYFLGIKVEREGDLGAFHMSQSQYIKDILQRHGMTQCRSAATPLDKSFVVDCNNDTCRRAEQLKYQSLIGELMYLALCTRPDIMHSVCKLAQLNSDPHVEHEAGLKHILRYLASTTELKLCY--RESGKSIVGFTDADWGNDLTDRKSFSGYAFFLGGSAISWQSKKQRTVALSSTEAEYIALAEGVKESLFLRNLLEEIGYEQQKQTTIYSDNLSAQHLSMNQLFHGRSKHID 1003
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: J9M5U1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9M5U1_ACYPI) HSP 1 Score: 223 bits (569), Expect = 1.880e-61 Identity = 115/323 (35.60%), Postives = 183/323 (56.66%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCRE-KVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 + +L KSLYGLKQ+++ W DN + +GL+ +D CLY ++ + + +YVDD++IAG K+ E K + + F + D G L LG+++ D+ G + I+Q +Y+ +VLK++ +D C + TP+E KL I + +++ + YR ++GSLMYA G+RPD++Y R P ++ K + Y + G+ F +SN L GFVDADWA DRKST Y+ K+ +SW +++Q V STEA+Y+A A E +++RK+L + G LFEDN+ AI+LS+ H R+ +D Sbjct: 1620 ILKLNKSLYGLKQASKCWHERFDNYIAKLGLKQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEEDN--KQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYFKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHID 1940
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 218 bits (554), Expect = 1.940e-61 Identity = 115/322 (35.71%), Postives = 185/322 (57.45%), Query Frame = 1 Query: 7 RLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAG-CREKVDEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLK-ISAPDCGRRDNSTEYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 +L KSLYGLKQS+R W++ LD L IG +D C+Y +DG +V ++VDD+++AG EK+ + K ++++ F+V D+G L +LG+++ + + I Q Y ++K+YG++ C+ V TPV+ K +SA + N E++ +GSL+Y S+ TRPDI + A+ +P E ++ K IF YL + G+ + +N + GF DADWA D DRKST Y ++NG +SW S+KQ V + A+YVA A +E +++R++L + T++EDN+SAI +S H R+ +D Sbjct: 290 KLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNIF--VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHID 606
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Match: H3H925_PHYRM (Integrase catalytic domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H925_PHYRM) HSP 1 Score: 218 bits (554), Expect = 2.620e-61 Identity = 119/330 (36.06%), Postives = 192/330 (58.18%), Query Frame = 1 Query: 1 VRRLGKSLYGLKQSNRNWDNSLDNILVVIGLEHFTTDSCLYFSRDDGREIDLLVTVYVDDLVIAGCREKV-DEFKHNMSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECRGVPTPVERKLKISAPDC--GRRDNST----EYRGMIGSLMYASTGTRPDIAYVEQQAARRMDDPCGEDFSTCKHIFHYLSTVPDIGITFGGKSNGHGLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEADYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAINLSTGSGAHCRTNTLD 966 V +L +SLYGLKQS R W+ ++D+ ++ +G + +D C+Y RD G+++ + V +YVDDLV+A +++ + KH +S+ F + DLG L LG+E++ D +G +T+ Q ++++ +L ++G+ + + V TP + LK++ C G + T YR IG+LMY TRPD+A ++ DPC + K + YL P G+ F + + G+ G+ DADWA D K R+ST Y +NGG ISW S+KQ+ V STEA+Y+A EA +E V+L+ L +G + ++EDN+ +I L+ H RT +D Sbjct: 346 VCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD-GQDM-IFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAIGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-QEDSVGMCGYSDADWAGDTKSRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHID 672 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11555.994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11555.994.1 >prot_H-paniculata_contig11555.994.1 ID=prot_H-paniculata_contig11555.994.1|Name=mRNA_H-paniculata_contig11555.994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp MSQCFRVNDLGSLARVLGIELRCDRPTGTITISQGRYVREVLKRYGVDECback to top mRNA from alignment at H-paniculata_contig11555:2535..3709- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11555.994.1 ID=mRNA_H-paniculata_contig11555.994.1|Name=mRNA_H-paniculata_contig11555.994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1175bp|location=Sequence derived from alignment at H-paniculata_contig11555:2535..3709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11555:2535..3709- >mRNA_H-paniculata_contig11555.994.1 ID=mRNA_H-paniculata_contig11555.994.1|Name=mRNA_H-paniculata_contig11555.994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig11555:2535..3709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |