prot_H-paniculata_contig11539.989.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11539.989.1
Unique Nameprot_H-paniculata_contig11539.989.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length161
Homology
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: D8LRZ5_ECTSI (DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRZ5_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 6.810e-76
Identity = 119/127 (93.70%), Postives = 124/127 (97.64%), Query Frame = 0
Query:   35 SPVRVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            +P RVD DYGADQITVLEGLEPVRKRPGMYIGS+GPKGLHHLVFEVVDNAIDEALAG+CDTVYVTLEEDGSC+VRDNGRGIPCD+HPRT KSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV
Sbjct:   34 APSRVDGDYGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNAIDEALAGYCDTVYVTLEEDGSCTVRDNGRGIPCDIHPRTKKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 160          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A835Z3N6_9STRA (DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N6_9STRA)

HSP 1 Score: 229 bits (585), Expect = 6.450e-69
Identity = 109/129 (84.50%), Postives = 120/129 (93.02%), Query Frame = 0
Query:   33 SASPVRVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            S+S  +V+ DYGADQITVLEGLEPVRKRPGMYIGSSG KGLHHL+FEVVDN+IDEALAGHCD V+VTLE DGSC+V DNGRGIPC +HP+TGKSALETV+TVLHAGGKFGGD SGYKVSGGLHGVG+SV
Sbjct:   23 SSSATKVNTDYGADQITVLEGLEPVRKRPGMYIGSSGTKGLHHLIFEVVDNSIDEALAGHCDAVFVTLETDGSCTVSDNGRGIPCALHPQTGKSALETVMTVLHAGGKFGGDGSGYKVSGGLHGVGISV 151          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: T2RDJ1_PAES9 (Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=1 Tax=Paeniclostridium sordellii (strain ATCC 9714 / DSM 2141 / JCM 3814 / LMG 15708 / NCIMB 10717 / 211) TaxID=1292036 RepID=T2RDJ1_PAES9)

HSP 1 Score: 201 bits (510), Expect = 6.700e-64
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 0
Query:   42 DYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            +YGA QI VLEGLEPVRKRPGMYIGS+GP+GLHHLV+E+VDN+IDEALAG+C  +YV++ EDGS  VRDNGRGIP +VHP+TGKS LETVLTVLHAGGKFGG   GYKVSGGLHGVGVSV
Sbjct:    4 EYGASQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEIVDNSIDEALAGYCSDIYVSINEDGSIFVRDNGRGIPVEVHPKTGKSTLETVLTVLHAGGKFGG--GGYKVSGGLHGVGVSV 121          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A6N3X686_9SYNE (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2 Tax=Candidatus Synechococcus spongiarum TaxID=431041 RepID=A0A6N3X686_9SYNE)

HSP 1 Score: 209 bits (532), Expect = 3.060e-63
Identity = 103/124 (83.06%), Postives = 110/124 (88.71%), Query Frame = 0
Query:   38 RVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            +V ADYGA QI VLEGLEPVRKRPGMYIGS+GP+GLHHLV+EVVDNA+DEALAGHC  ++V L  DGS  VRDNGRGIP DVHPRTGKSALETVLTVLHAGGKFGG   GYKVSGGLHGVGVSV
Sbjct:    6 KVQADYGAAQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNAVDEALAGHCTEIHVCLHGDGSAEVRDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFGG--GGYKVSGGLHGVGVSV 127          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A7S3XY21_HETAK (DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY21_HETAK)

HSP 1 Score: 214 bits (546), Expect = 3.850e-63
Identity = 103/119 (86.55%), Postives = 112/119 (94.12%), Query Frame = 0
Query:   43 YGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            YGADQITVLEGLEPVRKRPGMYIGS+GPKGLHHLVFEVVDN+IDEALAGHCD + + +  DGS SV+DNGRGIPC+VHP+TG+SALETVLTVLHAGGKFGGD SGYKVSGGLHGVGVSV
Sbjct:   11 YGADQITVLEGLEPVRKRPGMYIGSTGPKGLHHLVFEVVDNSIDEALAGHCDEILIIIHPDGSLSVQDNGRGIPCEVHPKTGRSALETVLTVLHAGGKFGGD-SGYKVSGGLHGVGVSV 128          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A354B1I0_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Synechococcales bacterium UBA10510 TaxID=2055795 RepID=A0A354B1I0_9CYAN)

HSP 1 Score: 206 bits (524), Expect = 3.970e-63
Identity = 97/124 (78.23%), Postives = 111/124 (89.52%), Query Frame = 0
Query:   38 RVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            +V+A YGA+QI VLEGLEPVRKRPGMYIG++GP+GLHHLV+EVVDN++DEALAGHCD + V L +DGSC V DNGRGIP D+HPRTG+SALETVLTVLHAGGKFG    GYKVSGGLHGVG+SV
Sbjct:    6 KVEAAYGAEQIQVLEGLEPVRKRPGMYIGTTGPRGLHHLVYEVVDNSVDEALAGHCDRILVALNDDGSCLVTDNGRGIPTDIHPRTGRSALETVLTVLHAGGKFG--SGGYKVSGGLHGVGISV 127          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A8J8AS25_9FIRM (HATPase_c domain-containing protein (Fragment) n=1 Tax=Proteocatella sp. TaxID=2819256 RepID=A0A8J8AS25_9FIRM)

HSP 1 Score: 199 bits (505), Expect = 5.350e-63
Identity = 95/122 (77.87%), Postives = 107/122 (87.70%), Query Frame = 0
Query:   38 RVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGV 159
            +V  DYGADQI VLEGLEPVRKRPGMYIGS+GPKGLHHLV+EVVDNAIDEALAGHC  +YV +E+D S +V D+GRGIP ++HP+TGK+ LETVLTVLHAGGKFG    GYKVSGGLHGVGV
Sbjct:   19 KVTKDYGADQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAIDEALAGHCQNIYVAIEKDNSITVTDDGRGIPVEIHPKTGKTTLETVLTVLHAGGKFGA--GGYKVSGGLHGVGV 138          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A7S1XU47_9STRA (DNA topoisomerase 2 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU47_9STRA)

HSP 1 Score: 213 bits (542), Expect = 2.580e-62
Identity = 104/119 (87.39%), Postives = 110/119 (92.44%), Query Frame = 0
Query:   43 YGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            YGA+QITVLEGLEPVRKRPGMYIGS+  KGLHHLVFEVVDNA+DEALAGHC +V V L EDGSCSVRDNGRGIP +VH +TGKSALETVLTVLHAGGKFGGD SGYKVSGGLHGVGVSV
Sbjct:   56 YGAEQITVLEGLEPVRKRPGMYIGSTSAKGLHHLVFEVVDNAVDEALAGHCTSVDVFLHEDGSCSVRDNGRGIPTEVHSKTGKSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSV 174          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A352JFX6_9CYAN (DNA topoisomerase IV subunit B (Fragment) n=1 Tax=Pseudanabaena sp. TaxID=1153 RepID=A0A352JFX6_9CYAN)

HSP 1 Score: 196 bits (499), Expect = 3.170e-62
Identity = 98/126 (77.78%), Postives = 106/126 (84.13%), Query Frame = 0
Query:   36 PVRVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            P  V   Y A+QI VLEGLE VRKRPGMYIGS+GPKGLHHLVFEVVDN++DEALAGHCD + V L  DGS SV DNGRGIP D HP+TGKSALETVLTVLHAGGKFG  + GYKVSGGLHGVG+SV
Sbjct:    2 PEIVTETYNANQIQVLEGLEAVRKRPGMYIGSTGPKGLHHLVFEVVDNSVDEALAGHCDHILVELMSDGSVSVSDNGRGIPTDTHPKTGKSALETVLTVLHAGGKFG--DGGYKVSGGLHGVGISV 125          
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Match: A0A4D9D639_9STRA (DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D639_9STRA)

HSP 1 Score: 213 bits (541), Expect = 4.060e-62
Identity = 108/142 (76.06%), Postives = 120/142 (84.51%), Query Frame = 0
Query:   22 ASSAKPDPTPSSASP--VRVDADYGADQITVLEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTLEEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKVSGGLHGVGVSV 161
            A+S  P P PS +SP    V   YGAD+ITVLEGLEPVRKRPGMYIGS+G KGLHHL+FEVVDN+IDEALAGHC  V VT+  DGS +V D+GRGIPC+VH +TG+SALETVLTVLHAGGKFGGD SGYKVSGGLHGVGVSV
Sbjct:   73 ATSIAPPPLPSMSSPPSTPVGGSYGADKITVLEGLEPVRKRPGMYIGSTGVKGLHHLIFEVVDNSIDEALAGHCTAVEVTIGADGSVTVSDDGRGIPCEVHSKTGRSALETVLTVLHAGGKFGGDASGYKVSGGLHGVGVSV 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11539.989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRZ5_ECTSI6.810e-7693.70DNA gyrase subunit B n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835Z3N6_9STRA6.450e-6984.50DNA gyrase subunit B n=1 Tax=Tribonema minus TaxID... [more]
T2RDJ1_PAES96.700e-6480.00Histidine kinase-, DNA gyrase B-, and HSP90-like A... [more]
A0A6N3X686_9SYNE3.060e-6383.06DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2... [more]
A0A7S3XY21_HETAK3.850e-6386.55DNA gyrase subunit B n=1 Tax=Heterosigma akashiwo ... [more]
A0A354B1I0_9CYAN3.970e-6378.23DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A8J8AS25_9FIRM5.350e-6377.87HATPase_c domain-containing protein (Fragment) n=1... [more]
A0A7S1XU47_9STRA2.580e-6287.39DNA topoisomerase 2 n=1 Tax=Phaeomonas parva TaxID... [more]
A0A352JFX6_9CYAN3.170e-6277.78DNA topoisomerase IV subunit B (Fragment) n=1 Tax=... [more]
A0A4D9D639_9STRA4.060e-6276.06DNA gyrase subunit B n=2 Tax=Monodopsidaceae TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00418TPI2FAMILYcoord: 107..120
score: 57.58
coord: 152..161
score: 47.64
coord: 72..87
score: 60.59
NoneNo IPR availablePANTHERPTHR45866:SF8coord: 41..161
NoneNo IPR availablePANTHERPTHR45866FAMILY NOT NAMEDcoord: 41..161
IPR003594Histidine kinase/HSP90-like ATPaseSMARTSM00387HKATPase_4coord: 68..161
e-value: 3.1E-5
score: 33.4
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 70..161
e-value: 3.4E-16
score: 59.7
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 39..161
e-value: 2.0E-55
score: 189.7
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 43..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11539contigH-paniculata_contig11539:7205..8048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11539.989.1mRNA_H-paniculata_contig11539.989.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11539 7205..8048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11539.989.1 ID=prot_H-paniculata_contig11539.989.1|Name=mRNA_H-paniculata_contig11539.989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
SIAPPASTATGAAATTVQRAVASSAKPDPTPSSASPVRVDADYGADQITV
LEGLEPVRKRPGMYIGSSGPKGLHHLVFEVVDNAIDEALAGHCDTVYVTL
EEDGSCSVRDNGRGIPCDVHPRTGKSALETVLTVLHAGGKFGGDESGYKV
SGGLHGVGVSV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003594HATPase_C
IPR036890HATPase_C_sf