mRNA_H-paniculata_contig11510.977.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A836CM67_9STRA (Tctex-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM67_9STRA) HSP 1 Score: 184 bits (466), Expect = 5.390e-58 Identity = 80/120 (66.67%), Postives = 99/120 (82.50%), Query Frame = 1 Query: 1 MEIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGLSL 360 M+IE SEQ AF+PEQVE I++ ID VLK EVY+E K HWV++ICDK M LH L+KPFKY+V+ ++QKNGAG H GHSA+WD+ +DN+CQ +WPT+KMREQQGSR+KCIVT FGLSL Sbjct: 1 MDIEASEQTAFLPEQVEGILMAAIDAVLKNEVYVEAKAQHWVDSICDKCMAGLHSLNKPFKYIVTAAVIQKNGAGVHAGHSAFWDIGSDNLCQVSWPTDKMREQQGSRIKCIVTAFGLSL 120
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: D8LG53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG53_ECTSI) HSP 1 Score: 180 bits (456), Expect = 7.940e-57 Identity = 81/93 (87.10%), Postives = 91/93 (97.85%), Query Frame = 1 Query: 1 MEIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQ 279 M+IETSEQLAFIPEQVE+I++ V+DG+L+TEVYLEEKVSHWVNTICD+ MQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWD+SNDN+CQ Sbjct: 1 MDIETSEQLAFIPEQVESILMTVVDGILRTEVYLEEKVSHWVNTICDRSMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDISNDNICQ 93
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A7S2XX11_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX11_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.980e-42 Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 4 EIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFG 351 ++++SE+LAFIPEQVE ++ ID VLKTEVY + KV W++TIC+ + EL L KPFKYVV+C+I+QKNGAG ++G +A+WD+ NDN+ A WP REQQ SRM C+VT FG Sbjct: 3 DLQSSEELAFIPEQVEPLLYQAIDQVLKTEVYDQSKVPQWIDTICETCVAELTALKKPFKYVVNCLIMQKNGAGLNMGQAAHWDLGNDNMASAKWPP---REQQSSRMVCVVTAFG 115
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A8J2SFI7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFI7_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.800e-36 Identity = 57/119 (47.90%), Postives = 82/119 (68.91%), Query Frame = 1 Query: 4 EIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGLSL 360 E + SE AF PE+VE ++ V+ VL EVY E KV+ WV+ ICD+ MQ+L ++KPFKYVV+C+++QKNGAG H G S +WD++NDN + +P ++ RM C+VT FG+S+ Sbjct: 4 EWQNSEDTAFQPEEVEPLLNDVVAKVLANEVYDESKVATWVDRICDQSMQKLTQMNKPFKYVVTCILMQKNGAGVHTGQSCFWDVANDNCARIAYPLASKKQAYDPRMYCVVTCFGVSM 122
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A7S1CA55_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA55_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.890e-35 Identity = 58/118 (49.15%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 4 EIETSEQLAFIPE-QVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGL 354 ++++SEQ AF+ E +V+ I+ GVI+ VL E Y+E KV HW+N++C+ M+ L +L KPFKY+V+CVI+Q GAG H HS + D ND +C WP EK ++Q + M CIVTV+GL Sbjct: 5 DLDSSEQTAFVVEGEVDPIVRGVIEKVLHNETYVESKVPHWINSVCEDVMEGLTELRKPFKYIVTCVIMQNTGAGMHTEHSGFCDAVNDGMCVVKWPAEKSKDQ--NTMYCIVTVYGL 120
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: K3WSZ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSZ8_GLOUD) HSP 1 Score: 122 bits (307), Expect = 8.870e-34 Identity = 57/118 (48.31%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 4 EIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGLS 357 ++++SE+LAF+ E+V+ I++ ID LK E+Y E KV+HWV+ ICD +++L +L KP KY+VSC+I+QKNGAG H S +WD D WP++K ++ S M CIVTV GLS Sbjct: 4 DLQSSEELAFVAEEVDRIIVVSIDACLKDEMYDERKVAHWVDAICDAILKQLSELRKPLKYIVSCMIMQKNGAGVHASVSCHWDTVTDGAHVVKWPSDKHKDHNRS-MYCIVTVGGLS 120
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A7S3RIL7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RIL7_9SPIT) HSP 1 Score: 121 bits (303), Expect = 2.750e-33 Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 28 AFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGL 354 A+ + VE I++ +DG LK + Y E+ V HW+N IC+ M +L+D KPFKYVV+C I+Q+NGAG H S YWD ND V WP EK ++ M CIVTVFGL Sbjct: 2 AWAGDDVEKIVVETLDGHLKDQQYAEDMVPHWINDICETVMAKLNDTKKPFKYVVTCAIMQRNGAGIHSATSCYWDAGNDGVLTYVWPREKSKDVVNKSMWCIVTVFGL 110
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A5D6YXL8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YXL8_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.590e-33 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 4 EIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGLS 357 ++++SE+LAF+ E+V+ I++ ID LK EVY E +V+HWV+TIC+ ++ L +L KP KYVVSC+I+QKNGAG H S +WD D WP++K ++ S M C++TV GLS Sbjct: 4 DLQSSEELAFVAEEVDRIILASIDACLKDEVYDERQVAHWVDTICETVVKGLSELRKPLKYVVSCLIMQKNGAGVHSSVSCHWDTVTDGAHVVKWPSDKHKDHNRS-MYCVITVGGLS 120
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A2R5G4I6_9STRA (Dynein light chain Tctex-type n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4I6_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.730e-32 Identity = 53/117 (45.30%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 4 EIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGL 354 +++++E+ AFI E+VE I+ I+ LK + + E KV+ W+++IC+ MQ+L DL KPFKYV++C I+QKNGAG H +S+YWD +D WP +K +EQ + + CIV+V+GL Sbjct: 3 DLQSAEESAFIAEEVERIVESSIETHLKDQAHDETKVARWIDSICETCMQDLADLGKPFKYVITCAIMQKNGAGLHTANSSYWDTVSDGCVTVKWPGDKSKEQNKT-LYCIVSVYGL 118
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Match: A0A2D4C4C0_PYTIN (Dynein light chain-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4C0_PYTIN) HSP 1 Score: 121 bits (304), Expect = 5.470e-31 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 4 EIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMQELHDLSKPFKYVVSCVIVQKNGAGFHIGHSAYWDMSNDNVCQATWPTEKMREQQGSRMKCIVTVFGLS 357 E+++SE+LAF+ E+V+ I++ IDG LK EVY E KV+ WV+TIC+ M+ L +L KP KY+VSC+I+QKNGAG H S +WD D WP++K ++ S M C++TV GLS Sbjct: 221 ELQSSEELAFVAEEVDRIILSSIDGCLKDEVYDELKVAQWVDTICETIMKGLGELRKPLKYIVSCMIMQKNGAGVHSAISCHWDTVTDGAHVVKWPSDKHKDVNRS-MYCVITVGGLS 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11510.977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11510.977.1 >prot_H-paniculata_contig11510.977.1 ID=prot_H-paniculata_contig11510.977.1|Name=mRNA_H-paniculata_contig11510.977.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MEIETSEQLAFIPEQVENIMIGVIDGVLKTEVYLEEKVSHWVNTICDKGMback to top mRNA from alignment at H-paniculata_contig11510:1977..3868+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11510.977.1 ID=mRNA_H-paniculata_contig11510.977.1|Name=mRNA_H-paniculata_contig11510.977.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1892bp|location=Sequence derived from alignment at H-paniculata_contig11510:1977..3868+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11510:1977..3868+ >mRNA_H-paniculata_contig11510.977.1 ID=mRNA_H-paniculata_contig11510.977.1|Name=mRNA_H-paniculata_contig11510.977.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig11510:1977..3868+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |