mRNA_H-paniculata_contig1151.975.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1151.975.1
Unique NamemRNA_H-paniculata_contig1151.975.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: A0A6H5KEM7_9PHAE (Tafazzin family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEM7_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 2.170e-113
Identity = 163/230 (70.87%), Postives = 192/230 (83.48%), Query Frame = 2
Query:  752 GGLGRMMQRLLSFMIMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGDQGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDIYNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCR 1441
            G   R   + LS++ ++TT  +FRFLL+GLNKV C N Q LLDA+ DRGD+GLLTVSNH  VYDDPGLW+ALVP WRT R +MRW++CTDDIY A+P+L+ IF AG+TLP+KR RGMEQP FK FF KLE G+WGHIFAEGAIRQPWRFS+GEP+L DF+AGIGRLLLRSK  P+VLPMYHIGMH++A EAP  K GRGKL+KI+PN G+ VRVYVGEPIDV PI+EKCR
Sbjct:  159 GVFRRASSKALSYLTIMTTWIIFRFLLKGLNKVECHNRQELLDAVLDRGDRGLLTVSNHMCVYDDPGLWSALVPFWRTGRKRMRWALCTDDIYYAHPVLKNIFDAGRTLPIKRNRGMEQPLFKAFFQKLEGGEWGHIFAEGAIRQPWRFSRGEPILGDFKAGIGRLLLRSKDPPLVLPMYHIGMHQIASEAPTHKRGRGKLLKIMPNFGRTVRVYVGEPIDVAPIIEKCR 388          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: D8LB90_ECTSI (Tafazzin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB90_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 1.390e-79
Identity = 119/176 (67.61%), Postives = 146/176 (82.95%), Query Frame = 2
Query:  737 PRKGKGGLGRMMQRLLSFMIMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGDQGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDIYNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLLRSK 1264
            P+  +G   R   + LS++ ++TT  +FRFLL+GLNKV C N Q LLDA+ DRGD+GLLTVSNH  VYDDPGLW+AL+P WRT R +MRW++CTDDIY A+P+L+ IF AG+TLP+KRTRGMEQP FK FF KLE G+WGHIFAEGAIRQPWRFS+ EP+L+DF+AGIGRLLLRS+
Sbjct:  145 PKSLRGVFRRAFSKALSYLTIMTTWIVFRFLLKGLNKVECHNRQALLDAVLDRGDRGLLTVSNHMCVYDDPGLWSALIPFWRTGRRRMRWALCTDDIYYAHPVLKNIFEAGRTLPIKRTRGMEQPLFKAFFQKLEGGEWGHIFAEGAIRQPWRFSRDEPILADFKAGIGRLLLRSE 320          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: A0A7S2UUF3_9STRA (Tafazzin family protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 8.470e-50
Identity = 99/244 (40.57%), Postives = 145/244 (59.43%), Query Frame = 2
Query:  725 IAIDPRKGKGGLGRMMQRLLSFM-----IMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGDQ-GLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDIYNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKL-VKIIPNLGQEVRVYVGEPIDVRPIVEK 1435
            + I  R+  GGL  +  RLL+++     + +T T LF  L+   NKV     + L+D +++R    G+L+VSNH S+YDDPGLW+A++P WR     +R+S+C DD+Y  +  L  IF AGK LPV R  G  Q + K + + +++G+W HIFAEG I QPWR+ +GEP+L   R G  +LL      P ++PMYH GMH + PE P +   R    + + P  G  V V++G+P  V  I+EK
Sbjct:  134 VPIYRREEPGGLLGLPVRLLNWVGRKLAVFITGT-LFAALIAWRNKVVTHRKELLMDCVYNREPGVGILSVSNHMSMYDDPGLWSAIIPWWRMPHRLLRYSLCNDDMYFVSKYLTPIFLAGKALPVSRKAGPNQQFMKDYTEVVDEGNWCHIFAEGKINQPWRYEEGEPVLGKLRIGASKLLTHLSHSPWIIPMYHFGMHDILPEKPQKNKLRVSTPISMWPRGGNRVDVFIGKPFTVTDILEK 376          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: A0A7S4DV10_9EUKA (Tafazzin family protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DV10_9EUKA)

HSP 1 Score: 168 bits (426), Expect = 1.380e-43
Identity = 87/225 (38.67%), Postives = 135/225 (60.00%), Query Frame = 2
Query:  794 IMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGDQ-GLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMR----WSMCTDDIYNANPLLRAIFRAGKTLPVKRT--RGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCRVS 1447
            I+V T +LF++LL   N V+  + + L+DA+ +R +  GL TVSNH S+ D P + AA+ P   ++   ++    W++CTD  + ANP+ R    AGK +P+KR   +G+ Q + K F DKL+ G+W H++ EG I QPWRF+KG+  L  F  G+G+L+   +  PM++P+YH GM  + PE         K + + P  G+ V +YVGEPID+  +V+    S
Sbjct:  109 ILVMTGWLFKWLLGFFNTVKVHHAERLIDAVHNRANNTGLFTVSNHASMLD-PAIIAAVYPWEESKEETLKQWPPWTLCTDSFF-ANPVARFWLSAGKAMPIKRASPKGLRQKFLKDFKDKLDDGEWCHMYPEGKITQPWRFAKGKSRLGKFLPGVGKLITTCRNRPMLVPIYHKGMDTILPEEEGDPRMPAKPISLFPKFGKHVDIYVGEPIDLSDLVQPTNAS 331          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: A0A7S0VP88_9CRYP (Tafazzin family protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VP88_9CRYP)

HSP 1 Score: 154 bits (390), Expect = 4.150e-38
Identity = 87/223 (39.01%), Postives = 130/223 (58.30%), Query Frame = 2
Query:  791 MIMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDR-GDQGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDIYNA-NPLL-RAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLLR---SKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCR 1441
            M+ V  T + R  L  LN+V   +H+ L + I  R     L+TVSNH S  D+P L++A++P W  R+ ++RWS+C D++Y    P+  +  F A + LP+ R++ + QP FK F D+ ++G W HIF EG + QPW+  K   LL   + G+G+L+     SK  P+VLP YH GMHR+ P+ P       K   + P  G  +RV VGEPI+V+ ++E  R
Sbjct:  135 MVFVFDTLINRPFLNILNRVEISDHKRLTELISKRPSGTPLITVSNHQSSLDEPLLFSAVIP-WPIRQWELRWSLCNDNMYYVFGPVFAKLFFHAARGLPIWRSQSINQPSFKEFCDRAQEGGWCHIFPEGRLWQPWKLQKEGRLLGKLKPGVGKLVGHCDTSKHPPIVLPFYHTGMHRILPQYPSSP----KKQALPPKTGNTIRVRVGEPIEVQDLIEAHR 352          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: A0A835Z8H0_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H0_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.380e-37
Identity = 99/260 (38.08%), Postives = 138/260 (53.08%), Query Frame = 2
Query:  671 SSPVAPTNVAA--VAACTKTIAIDPRKGKGGLGRMMQRLLSFMIMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGDQG--LLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDIYNA-NPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEK 1435
            SSP   T VAA   +  T+T  +   K  G      +R+ SF  +     LFR +LQ LN+VR  N  GL+  + D   +G  LLTVSNH SV DDPGLW A++P WR    KMRWS+CTDD+Y A  PL+                    P+++                           +G+P+L DF+AG+GRL+ R    P+++PMYHIGMH +APE PV +    KL +   ++G++VR+YVGEP++V  I+ K
Sbjct:  115 SSPAPDTGVAADGTSGSTRTGPVGVLKAIG------KRVGSFWAVGIVGILFRIMLQVLNRVRVTNLSGLIRHV-DHRTEGTPLLTVSNHMSVLDDPGLWGAILPFWRLGPRKMRWSLCTDDVYFAVKPLV--------------------PFYR---------------------------QGQPILGDFKAGVGRLVARCSSTPVIVPMYHIGMHTIAPEQPVPRRAAAKLQRAF-SVGRQVRMYVGEPVEVEHILNK 319          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: W4G9P0_9STRA (Tafazzin family protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9P0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.890e-36
Identity = 83/227 (36.56%), Postives = 121/227 (53.30%), Query Frame = 2
Query:  806 TTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGD-QGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDI-YNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPW----RFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCRVSSLQKTNG 1468
            TT + +  L  LN   C+N + L   +  R D + L+TV+NH +  DDP + AA++P    R    RWS+C+ +  Y   PLL  IF   KTLP+KR  G++ P+ +  F +++ GDW HIF EG I Q      R       +   + G+G+L+ R++  P+VLP+YH+GM +V P+ P  K     L  I+P LGQ V V VG PI    + +K      Q   G
Sbjct:   67 TTLVAKVYLGKLNNFTCRNEETLEKWVLSRPDHRALITVTNHSATVDDPAVLAAMLPWSCARPSLSRWSICSQEYCYAKGPLLSTIFFGSKTLPIKRGAGIDHPFLQDLFQRVQDGDWVHIFPEGKIVQGGGLGGRDGPDAATIGRLKWGVGKLIARAEITPVVLPIYHVGMDKVMPQTPDHK-----LKSIVPRLGQRVHVLVGSPIYFDDLFKKYEADRRQGVQG 288          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: W4G9Y7_9STRA (Tafazzin family protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9Y7_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.130e-35
Identity = 83/228 (36.40%), Postives = 121/228 (53.07%), Query Frame = 2
Query:  806 TTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGD-QGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDI-YNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPW----RFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCRVSSLQKTNGR 1471
            TT + +  L  LN   C+N + L   +  R D + L+TV+NH +  DDP + AA++P    R    RWS+C+ +  Y   PLL  IF   KTLP+KR  G++ P+ +  F +++ GDW HIF EG I Q      R       +   + G+G+L+ R++  P+VLP+YH+GM +V P+ P  K     L  I+P LGQ V V VG PI    + +K      Q    R
Sbjct:   67 TTLVAKVYLGKLNNFTCRNEETLEKWVLSRPDHRALITVTNHSATVDDPAVLAAMLPWSCARPSLSRWSICSQEYCYAKGPLLSTIFFGSKTLPIKRGAGIDHPFLQDLFQRVQDGDWVHIFPEGKIVQGGGLGGRDGPDAATIGRLKWGVGKLIARAEITPVVLPIYHVGMDKVMPQTPDHK-----LKSIVPRLGQRVHVLVGSPIYFDDLFKKYEADRRQGVQVR 289          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: A0A6G0X5F7_9STRA (Tafazzin family protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5F7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.350e-33
Identity = 84/232 (36.21%), Postives = 125/232 (53.88%), Query Frame = 2
Query:  791 MIMVTTTYLFRFLLQGLNKVRCQNHQGLLDAIFDRGD-QGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDI-YNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGE----PLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCRVSSLQKTNG 1468
            M+    T + +  L  LN    +N + L   +  R D + L+TV+NH S  DDP + AA++P    R    RWS+C+ +  Y   PLL  IF   KTLPVKR  G++ P+ +  F+K++QGDW HIF EG I Q       E      +   + G+G+L+ R+   P+V+P+YH+GM +V P+   + H   KL  IIP +G+ V V VG+PI    +  K +    Q  +G
Sbjct:   62 MLFFPATLVAKVYLGKLNHFTSRNEETLEKWVLSRPDHRALITVTNHSSTVDDPAVLAAMLPWSCVRPHVCRWSLCSQEYCYQKGPLLSTIFYGAKTLPVKRGAGVDHPFLRDLFEKVQQGDWVHIFPEGKIVQGGALGGREGPTAKTIGRLKWGVGKLIARADITPVVVPIYHLGMDQVMPQT--EHH---KLKSIIPCIGKRVHVRVGDPIYFDDLFIKYKKDRRQGESG 288          
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Match: I0Z9Z8_COCSC (Tafazzin family protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z9Z8_COCSC)

HSP 1 Score: 134 bits (336), Expect = 7.460e-32
Identity = 86/260 (33.08%), Postives = 132/260 (50.77%), Query Frame = 2
Query:  821 RFLLQGLNKVRCQNHQGLLDAIFDRGDQ-GLLTVSNHCSVYDDPGLWAALVPIWR-----TRRGKMRWSMCTDDIYNANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAIRQPWRFSKGEPLLSDFRAGIGRLLL----RSKKLPMVLPMYHIGMHRVAPEAPVQKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCRVSSLQKTNGRHL-NSRKVSQNYHLILYAPCCVVLHRIRRGRSL 1567
            +F+L  LN  R  N +G+ +   +R    GLLTV NH S  DDP + +AL+P W+     +  G  RWS+C  +I   N  L   F +GKTLP++R RG++QP  +     L +GDW H+F EG +    R       +   + G+G+L+      S + P++LP YH GM RV PE     HGR      IP +G++V + VG+P+DV  +  +C      +   RHL +   ++    L  +   C+  H +    S+
Sbjct:   36 KFVLNVLNTTRITNVEGIEEVANNRPPGVGLLTVCNHTSTIDDPVVLSALLP-WKFFYTESMHGGNRWSLCAKEICYRNAFLGQFFLSGKTLPIERGRGLQQPAMQTAARLLGRGDWVHVFPEGRVGYSGR-------VQPCKWGVGKLVCDCVAESGRNPVILPFYHSGMGRVMPE-----HGR------IPRVGRQVDITVGQPLDVSDLTCRCGQPGTDQKQARHLPHPAHLADLSSLSPFFAACLQTHPVSGRNSM 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1151.975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEM7_9PHAE2.170e-11370.87Tafazzin family protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB90_ECTSI1.390e-7967.61Tafazzin family protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UUF3_9STRA8.470e-5040.57Tafazzin family protein n=1 Tax=Fibrocapsa japonic... [more]
A0A7S4DV10_9EUKA1.380e-4338.67Tafazzin family protein n=3 Tax=Lotharella globosa... [more]
A0A7S0VP88_9CRYP4.150e-3839.01Tafazzin family protein (Fragment) n=1 Tax=Hemisel... [more]
A0A835Z8H0_9STRA1.380e-3738.08Tafazzin family protein n=1 Tax=Tribonema minus Ta... [more]
W4G9P0_9STRA4.890e-3636.56Tafazzin family protein n=7 Tax=Aphanomyces astaci... [more]
W4G9Y7_9STRA3.130e-3536.40Tafazzin family protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0X5F7_9STRA1.350e-3336.21Tafazzin family protein n=1 Tax=Aphanomyces euteic... [more]
I0Z9Z8_COCSC7.460e-3233.08Tafazzin family protein n=1 Tax=Coccomyxa subellip... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1151contigH-paniculata_contig1151:1386..16869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.8
Seed ortholog evalue1.4e-67
Seed eggNOG ortholog2880.D8LB90
KEGG rclassRC00004,RC00037
KEGG koko:K13511
KEGG ReactionR09037
KEGG Pathwayko00564,map00564
Hectar predicted targeting categorychloroplast
EggNOG free text desc.cardiolipin acyl-chain remodeling
EggNOG OGsKOG2847@1,KOG2847@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Exons8
Model size1631
Cds size1293
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1151.975.1prot_H-paniculata_contig1151.975.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1151 1444..16589 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928857.0080721-UTR-H-paniculata_contig1151:1385..14431622928857.0080721-UTR-H-paniculata_contig1151:1385..1443Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1151 1386..1443 -
1691480647.373124-UTR-H-paniculata_contig1151:1385..14431691480647.373124-UTR-H-paniculata_contig1151:1385..1443Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1151 1386..1443 -
1622928857.1087615-UTR-H-paniculata_contig1151:16589..168691622928857.1087615-UTR-H-paniculata_contig1151:16589..16869Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1151 16590..16869 -
1691480647.4771748-UTR-H-paniculata_contig1151:16589..168691691480647.4771748-UTR-H-paniculata_contig1151:16589..16869Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1151 16590..16869 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928857.0207913-CDS-H-paniculata_contig1151:1443..16401622928857.0207913-CDS-H-paniculata_contig1151:1443..1640Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 1444..1640 -
1691480647.3837385-CDS-H-paniculata_contig1151:1443..16401691480647.3837385-CDS-H-paniculata_contig1151:1443..1640Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 1444..1640 -
1622928857.03288-CDS-H-paniculata_contig1151:2101..22131622928857.03288-CDS-H-paniculata_contig1151:2101..2213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 2102..2213 -
1691480647.391503-CDS-H-paniculata_contig1151:2101..22131691480647.391503-CDS-H-paniculata_contig1151:2101..2213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 2102..2213 -
1622928857.0437725-CDS-H-paniculata_contig1151:4861..49311622928857.0437725-CDS-H-paniculata_contig1151:4861..4931Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 4862..4931 -
1691480647.4008312-CDS-H-paniculata_contig1151:4861..49311691480647.4008312-CDS-H-paniculata_contig1151:4861..4931Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 4862..4931 -
1622928857.0550811-CDS-H-paniculata_contig1151:7354..74281622928857.0550811-CDS-H-paniculata_contig1151:7354..7428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 7355..7428 -
1691480647.413914-CDS-H-paniculata_contig1151:7354..74281691480647.413914-CDS-H-paniculata_contig1151:7354..7428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 7355..7428 -
1622928857.0666-CDS-H-paniculata_contig1151:8454..85931622928857.0666-CDS-H-paniculata_contig1151:8454..8593Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 8455..8593 -
1691480647.422336-CDS-H-paniculata_contig1151:8454..85931691480647.422336-CDS-H-paniculata_contig1151:8454..8593Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 8455..8593 -
1622928857.0783513-CDS-H-paniculata_contig1151:9846..99801622928857.0783513-CDS-H-paniculata_contig1151:9846..9980Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 9847..9980 -
1691480647.4327698-CDS-H-paniculata_contig1151:9846..99801691480647.4327698-CDS-H-paniculata_contig1151:9846..9980Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 9847..9980 -
1622928857.0879924-CDS-H-paniculata_contig1151:15504..159311622928857.0879924-CDS-H-paniculata_contig1151:15504..15931Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 15505..15931 -
1691480647.4509096-CDS-H-paniculata_contig1151:15504..159311691480647.4509096-CDS-H-paniculata_contig1151:15504..15931Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 15505..15931 -
1622928857.0993307-CDS-H-paniculata_contig1151:16449..165891622928857.0993307-CDS-H-paniculata_contig1151:16449..16589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 16450..16589 -
1691480647.465917-CDS-H-paniculata_contig1151:16449..165891691480647.465917-CDS-H-paniculata_contig1151:16449..16589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1151 16450..16589 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1151.975.1

>prot_H-paniculata_contig1151.975.1 ID=prot_H-paniculata_contig1151.975.1|Name=mRNA_H-paniculata_contig1151.975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=431bp
MRHSGATLLKIFSWWCYYVFSIPPTSLAFVSAPAPPSNARFQYRYLGPAR
FTSRAAAHHRHRQHHQYQHHLQQNKTGPLFSITSPLPSTEASFLLPEKKQ
EFAPPAAAAAASVPIAGTSESGITDDGVSASSPVAPTNVAAVAACTKTIA
IDPRKGKGGLGRMMQRLLSFMIMVTTTYLFRFLLQGLNKVRCQNHQGLLD
AIFDRGDQGLLTVSNHCSVYDDPGLWAALVPIWRTRRGKMRWSMCTDDIY
NANPLLRAIFRAGKTLPVKRTRGMEQPYFKVFFDKLEQGDWGHIFAEGAI
RQPWRFSKGEPLLSDFRAGIGRLLLRSKKLPMVLPMYHIGMHRVAPEAPV
QKHGRGKLVKIIPNLGQEVRVYVGEPIDVRPIVEKCRVSSLQKTNGRHLN
SRKVSQNYHLILYAPCCVVLHRIRRGRSLR*
back to top

mRNA from alignment at H-paniculata_contig1151:1386..16869-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1151.975.1 ID=mRNA_H-paniculata_contig1151.975.1|Name=mRNA_H-paniculata_contig1151.975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=15484bp|location=Sequence derived from alignment at H-paniculata_contig1151:1386..16869- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGATCTTCGTGAATCCTTTACCGATTCGAGGGGGGGGGGGAGGCGGGG TTGCAGCGGACCTGTTACCTACACATGGTAGCTGGGTGATGGTAAGTAAG AACCATGGGCGCATGGTTCTTGGTTCATCCTGCGGCTTCAACTCGTGATG TCATGTATCTCCTACACACTTTTCCTCATCTAGTCATTTCCCTCCCCAAA AAACTGTGCTCAAGCGCCTTCTAATCTGCCGTAATGTGGTTACATCGTCA CTTACAGCTATAGAATGCTCGATTCGAGAGATGAGGCACTCTGGAGCAAC CCTTCTGAAGATTTTCTCGTGGTGGTGTTACTACGTATTTTCTATCCCTC CCACTTCACTGGCTTTTGTTTCTGCACCTGCCCCACCTTCCAACGCCCGA TTTCAATATCGATACCTTGGGTGAGTGTGACCGCATTCGGTTGTACATCT ACTGACTAACGAAGCGCCATACCCCAGTTATTTAAGCATGGTGACAATGG AGTTAGTATTTGACCAGATGTCTGTACATTCTGTGATGGTGTTGTTGTAC CTCCCTTATACTGAGAAGTGGAACGGCGTACTGTACTTGTATACTGTACT TGTACTGTAACTTCTCGTCAACTTCAAATTTATCTACCCTATACGTAAAT ATCCCATTGGTAAGTGCAAGTGCATTGCTGAGGAATATCAACATGGCTAA GCTTGGGCAACCCACAACCATGGGTACGGCTGTGATGTAGAACGGTCTCA CCACTAGCAGTATACTGACTAGTGCTTGTAGCTATATCACCTCATAGTTG GTAGGTCTATGAACTACAAGAGAATTAGAGCTCTGGCTAGGTACAGACCA CCGACAGTACATACAGTTTTCAACACCACCGATTCGCCATTTTTATGATC ACATCCCAACTGCAACATCTGTATGTCCCTCCTGAAAGTCCCGCGAGATT CACTTCACGTGCTGCTGCGCATCATCGTCATCGCCAACATCACCAATATC AACATCATCTGCAACAGAACAAGACCGGGCCGCTCTTTTCTATAACATCG CCACTGCCATCGACTGAGGCATCCTTTCTTCTGCCGGAGAAGAAACAAGA ATTCGCCCCTCCGGCTGCTGCTGCTGCTGCCTCTGTGCCGATCGCTGGTA CTAGTGAGAGCGGAATCACAGACGATGGAGTATCAGCATCTTCTCCGGTA GCCCCAACGAATGTCGCTGCTGTGGCTGCATGCACCAAGACGATAGCAAT TGACCCAAGGAAAGGGAAAGGAGGCCTTGGACGGATGATGCAGAGGCTTT TGTCTTTCATGATCATGGTAACCACTACATATTTGTTCCGTTTCCTGCTC CAAGGACTCAACAAGGTGAAATACATTAGTATGATGTTGGCAGTACTTGT ATTATTAGTGTTTGCGCAAAAGGAATTCTATTTGACTTTTCGAGTGTTTA TTCTCCCGTTACAGATGGAACGCCACATATATATGCAAGATTGCTGGCCG AGATTTTTAAAAAATGATCACCAAACCGAGATTTGAACTCGAAAAGTGAA GTCTCTACAGAAAATGTCGCAACATATTGCCGCAGACTAATTGTTTCAAA CCAGCACAAATCACACGGCCTAGATACACCATCTGGGCAGCGGAGCACGG CACGCGAGATTGACTAGGTTGAGACAATATCAATCAGCTGCAGATCAATC GGCGCTGTGGGGCGCTGTACGCTCAGAAGCGTGTGCGAATTCGGCTATTT TTGCGGTGCACGCTGGCGATGTTCATGGCATCATTCCATTTGATGTAGCC CCTCTTGCCCGCGGTCTGTCTGGTTGAGGTTGTCGAGCCCGCTGTGGCGG CCGACACGTGCCCGACCAGCTGTTCGATCGGGGGTGCAGGCGAATCGAGG TCAATAAGAGAAATGGAGGCGCTCGCTACGTCCAGCGCGGCAAACTGCAG TCTGCCATGCTGGAAGCCACCGTTGCTGACACTGGCGATGAAGCTCGTGG TCCGCCGCTGACATCTATCATAGTCCACGAGGCCTCTATGGTGACAGCAC AAGATGTGTTTTGCGTCGTGCATGTTTCCAAGGCCCCTGCCTGATGCCCG GATACCCATAACAATCTAGTGGGAACCCAGTCGTAAAGTGGGGGTACCTC GATGTTCGTACAATCAAATAATGATCAAATAATTAGATCGGCGCAAACTG TTTTCAGCACCTGGATTCGGCAGGAATTCGTATCTCGAACCGACGGAAAT TTTGATTCTACAAATCGAAATAAAAATAGTATTCCTTTTGTGCAAACACT CTATTTACAGTGCAGATTTAGGTGTAGATCAAATTATTTAATACACTCAG TACGGAGGACGGGGTAGACCTTGGAACTTTGCAAGGCTCGCTCGCTGAGG TGCCATGTGTGCCATGCAGATGAATACCGTAGCGTACATCAGCTTGTACA ATTGTACTATTTACTACCACCCTGGCCCAAAATATAGCTGGGATCGGAAA CGCCCACAATATAGATGGGATTTGAGATTAGAGCTCTATTAGAGGAAGAA CAACTCGGGAAAATACCTGGGGACGCTCTTTGATACACAAATTGGGTTAA CGGGGGGGGGGCGCCTGGGAAAGCATCCCCGCTGCCCCGAGACCTGCTTC CCAGAGATATTCAGAACCTTTTTTGGCAGATCTTGAGGGTGTTCATGAGG CCTTTTATAGAGAGGACAACGTACTATTTTGTCGCGATATTTAAATCCTG TTCTGACACCCGCACAAATCACCGGGCATGCTCAGCAGATGATTGAAAGG TTTCCATTTTTCAAGTCGCGGTGCTGCCTCTTTGAGAGGGGAAAATCATT CAAGAAAAAGAATACCTTTTCTTTTTTTTAACGATGGGGATTTGAACCCT CTCAATTGCCGATCATCGAAATTGAGGATAGATAATTTTGTTGAGGATGA AACGGTTTTGGGCGATGTTACCAACAATGACTGCTGAATCATCCTGGGCG GTCCTAGACTGCGTGAACGCGCGTGACGTCAGCGTTCACGGGCCGTTGTT CGTTTTTCAATCGAGTCATTGCTTGTCGAGATATTGGGAAAATACGAAGA ATATACATATATAGCCGGTAAGGGTGTTTCTCGTGTTTTTTTTTTTGTAT TATCTTGAGATTGACTTGTCCAACTCAATCGAAAGTAGGTGCGTTCGACA GCTATTGGCGAGAAACATAAATTTCCGCCCCTCGGTTTCTTGCATTTCGC ATGGCAACAAAAGTTCACCCCCCTAACAAACACGAATACTTGCAAATGAT TTTCACAAAAACTGAAACTATTTGCCTGAGTTTCAGCATTAGCTTGTGTG TGTATGTGCCCCGGACCATCCACGACTGCCAATAATACTCGTAAATCGAA TGAACAGGGGTGAATACTTCATTTCATGTGTTCGCTCATTGTAAAACCCA GGCGAATACTTGCAGTTTTTTGTGAAAAACAATTGCAAGTATTCGTATTG GTCGGTGGGGGGCAAAAGCTATATCTCGAAACGCTCATCCTCAATGAGAA GATCGATACTTCAATTTTGAGGATCGGCTGTTTCGCAATAAAGTAGTATG CCCCACATTGGTTCGCCACCTAGTGTCTCAACCCCTGCTATGAGTCGGGC CAGAGTGGTGTAACATACTGTCTTGTGCACGGACTGTCAGCCCTCCATAG ATAGGCATACTGCGCCTCGTAGCCAGGTATCGTTTGATGTCCTCGTTTTG AGGATCTTGGCTAAGGCCTTTTGAGTTTTGAGGTGGCATATATCCTAAAC GTGAGGCCGTACTGTAGTACTGTACTGTACTGTACTGTACTGTACTGTAC TGTACTGTACTGTACTGTACTGTACTGCACTGTAGTCGCCAAAGTAGTTT TCTTAAGTACTATTTAAATCGCCAGTAAGTAACCCTAAATAGACACATAA GGTATATACTTGTTGCCACAGTTATTGTTATTGGATCTGCCACGGGGGGG GGGCATACTCATGTTTTTATGTCGTAATTGTTAGAGCATTGAGCACACGT CCTCGGGAGGACAAAGCCTTGTTCCTACCAGAGTGATTTCCGGTGGCCAA TCGCTGCCGCGCGAAGGGAACAGAAGAACAGGTACCGTGTAGAACAAAAC ACTTTTTCTCTATCAAACGACCAGACGCCTCTTCACGTGGCATTATGAGG GCAAGGCTCCACCGGCGACGTGGTTGTGCTCGTCTAAATAGAGAGGGGGG CATGTATCTCTTTCGCGGGCGGGCGTTCGTCACCTCAGCCTGGCTGATTC AAGACAAATGGCGAGGCTCAGCGTTAATCACGCTGCGTGTTTTAGCTGCA ACCTGGACGTACCCAATGCGTTCGTTGTACATACATGGCAGCTCCAGTGC ATCGAGAGAAATCTCGTTGAGGGAAGAGGTGGTTGTAACTTGTTCAAGAC AGGGAATAAAAACAGACCCAGGTAGCTACAAAGGTATTTTGAAAACTCCT AAATGACAGAATAGTTAGAAGTACTGGAAAAGTAAAGTAGGATCAGTGAG GGTCAAGCAGGGTTCTGACACAGTATGGGTTGTGCAGGTGACGTGTACAC AATAGGCATGATCATCCCTGATAGGAAGAAGAGATACTATTTATTTCTGG ACGTGCAGAAAGCACATGCCACATCATAGAGAATTGGATTGTAGAAGCAG CTATCAAAATACGGAATCAAGGGGAAAATGTGGGAGAATATAAAAAAATG ATAACAATAATACCAAAAAAAAATGTTTTGCTCAATGAGGAACTGTCGGA CTTTTTCAAGATTGCAAGGGTTCCCAAAGATGTACGTTATATCTACAACA TTGTTCCAGATTCTAATCAACGATATGCTCCAGTAGTGGAAGCGGTAGGG CAAGGGGCACAAGTAAGAAGAAGGGATGTATCTGGACATTGTTTGCTGAT GCCTCCGTAGGGATGTCTGATACTCCGAAGGGACTGCAGAAGCATGTTAA CGCAGTGATGCAATTTGGTAGGACGTGGAGACTTGAAGTGGAAATGGAGA GAGAGGAGTTACCAAGGTTGGATCCGTACACATGTCTCGGCGTTGAGTTC CCGAAGGACTGTGAGTGGGATGTACATATAAAGAAAGTAATTGATGAAGG GAAATCCCGGGTAGGAAAATTGCCTCCGATACGAGCCTACCGGTATCTTG ATAAACACATCAAAACCGAAAAAATGGAAAGCGTTATTATTCAGATGAAA CCAGCGAGGGGAATGCTCGGGTATTTCTAGCGCACCGGCAATCCAACAGT AAGAGCAGAGCTCGGCGTTCACTCCCTGAAACGGGGAGATACATAAGAAA GCCGAAGTCGCAGAGCAGGCTGCAGAAAATAGTAAACAAAAGACTGCCAA AAATAGCTAGCAAAAAATAGAGTGGGGGTCGATTTAAAAGGGTAGCAGAT CCATTGAGTGGGTTACCGTAGTAGAGAAAATATGGGAAAAACTGGAAATT TCCAAGGATAAGGGAACGCTGAAAAGTAAGAGCATGGAGGGGTTTAAGGA AGAAATAGGGGGTGCGATTGCAGTCAAAGAAAAACAAGAACCGAGAAGAG AAGCTGCGAGTAAGGAAGGTTTGGAAGTGTACCAAAGAAGGAGTCGAAGG GATGTCTACGTAGACCATTAGACGCAAGCACAAAGTTGTAAGTCAAGTTT GTGGCGGTGGATGTTGACCTCGAGAAACATAGGACACGATTCAGGAAAGT AGACGAGGGTGACGACGCGAGATTCCAAGTGTGACTGCGGAAGTGCGTCG GAAGACCGACTTCACTTTGTGGGAGAATGCCCCCTGTCTGTGACAAATTG AGAGAAAATGTGGAATAATGTATATGGGAAAATTGAAGGATGCGATATAG AGGCGCCCGAAGCCTGGAATTGCGAAAATAAGGCGATATCGATTCTAGGG GTTAGAAATTGGCCTGAAAAAGCGAGGGTTGAGGTAGATAGGACAGATGA AACGTTGTTGAGTCACGTCTGGCAACGTAGGAAAGATCGATTGACCATCG GAAATCACTCTGCTGGGAACAAAGCTCTGTCCTCCCGAGCACGCTTAGTC AATGGTCAAATATGAGTACCCTCACCCCCCCCGCCTGAATCGCTGGTGAG GATCGATTGGGTATTGAGATTGAAAAAACAATTCAGCTCATGTATATATT AAACGTGTATTTGACCAGAACCAATGCGACGGCCGGAAAGTGCTTGGTCA TGTTCCAGAATCACGTGGCCAAAAAAACGAACCGCCGCCCAAGTGAAGAA CGACCCTCTACCCTCTCTCTGTTTATTGATCCAAAAAGCGTCGCCACCCA AAACGATTTAGATGTGCATACAAGTGGAGAGTACCTTATAAAAGGGGTAA ATTACCACAAATGTCCATAGAGAACAATACATTTTTTTCACGATGGCAAC ATCGGTGAGGTAACTCTGTCTGCTTAGAGACCAGAAGGGTCCCGGGTTTT GGTTGAGCCCAGTCCCAATCGCCGCGAGAAACAAATAAAAAAGCAAAAAG TTAAGCGGAAACTAGACAAAGCGCAAGCAGGGTGCGGAACGAGCAGTAGG GTTCACGAACTACTCTCCTGCGAAGAATCTTGGTTTGGTCGGTCACCCAA CACATGCAGCAGAAATGTGATGAAACATGTTTTTTTTAGAACATCATCAC CGCTAGCGGGCGGAAAAGGTTCCCTCTAGAAGCCTCTTATCTCGGTAAAA ATACCAAGTGAGAATTACATGAAGGGGGGGGTGATATGGAGAGTACCACA AGTGTCCGTAAAGGACATTACCCCTTTTCACATATGTAATACATTTGGAA CAACGTGCTTCGACGTGCATTTTCCGTCTACAACAACAGGTGAGGTGTCA AAACCACCAGGGCTTACTGGACGCTATCTTCGACAGGGGAGACCAAGGTC TGTTAACCGTCAGCAACCACTGCAGCGTGTACGATGACCCCGGCCTGTGG GCGGCGCTTGTGCCGATATGGCGGTGCGTATTCTCCTTCATTTGTCCCTT ACAAAAAGAAGAAAAAGCCTAACCCTCAATATCTAGATAGATATTTAGAT ATATAGATATTGTTTCTGTTGTCCCTTGCCTGTTAGTTTTTTGGAAAGAC TTTCTGTCGTTGCTGTAAACAGGAGGAGGAGGCAGGATCCACTTTCAGGT CAAGTATGTGGTTACCAATTATCTGCTCCCGCTGACATTCGAGTACGGTT GTGTACGTGGGTATGCTGTATGCATGTGGATACAACATGTACTCACCCCC CCCCCCGAGTGTATTGGTGTGACAACAGTTGTTGGCTTTCAGAGTTAGTT GTTCTCTCGTAAAGTATTATTTTAAAAGTCAGTAACACGTACGCGTAGCT TCTCTAACTCTGTCGTTTCTCGAACGTCGAAATGTTACCAAGTGCTACCG TGAGTACTCGGGGGGATCCCGCACACCGGGATGCGACCGTTCTTCAAACG AGAATTATCTGGAGAGAGAGGGATACCGGAGACCTTCTTCCGTGATTAAT ATTGTTTGTTTCCTGACAAATCCACAGATTCCCGCAATATCGATATTTTC CAGCACCACAACTTTTTAAATTGTCAGTAAGATAGCGAGTAAGCTAGCGA ACGCCGTGTATCGATGGTGGCAATTGCCGGGATTATCACGGCTGAAAAAT GTCTGCACCCCGGTGCGGTATCCCCGGGTGGTTTTTGCGGTACTTGGCGC ATGTTGTACGACTTCCGAAATCAGCCACATCAAGTCTTACGAACGAAATA TCGCTCCTGCACGAGGCTGGGACTCCACCGCGACATGTGGCTTAAATATA AGAGCCCTCCCCCCATCCTCCCGAGGACGCGTGATCAGTGGTCTAATTAA TGACTGCGGCATGCAAAATATGAGCCTCCCCCCCCCCCTTCCCCCCTCAT CCCGCGCAACCGTGCAAAAACACAAGACCACCGTGTCGCCGTGTCGCAAT GTAGGCCGTTTGTTTTGTGTGCCCATCATGTGGGCATGGTCGAGTTTTTT TTAGTGATTGTAGGAAGGTCTACGTGCCTTGCGCTGTTATGTGCAGCCTG ACGACGAGGCAGTACAACAGTGGAGGGAGTTGTACTTTGAGGTGTAGTTT ATATTGAAAGTGTGATCAAACATTGAAGACTAACACTAAACACATGGAAC GCTTGCGCTCCGCGCTGCCCTTCATGCATACCGTAATGAATTCGTGCTAC CCTCCCCATTCTTTTTTTCTTTTCAGGACACGTCGTGGGAAAATGCGGTG GTCGATGTGCACGGATGATATTTACAACGCGAATCCACTACTCAGAGCGA TATTTAGAGCTGGGAAGACCCTCCCCGTCAAACGCACTCGGGGGATGGAG CAACCGTATTTTAAGGTGCATACATCACATTGCTTGTTGCTTGTCGTGCT CATGCCCTATGAAGGGCTTCAAGGCCTTTGAAAGGGCTGCAAACAATCCC ATTAATGGAGTTGAATGAATTAGCTACAGCATCTGGAGAGAAGTGACGCA GTCAGAGTCTTCAGCAGCTGTACGAATATACTCTAGAGTATGTATGTATG TATGTATGTATGTATGCATATATACACATACTCCAGAGTATTAGTTACTG CAGATGAGTGCCCCAGGGTATCCGGTCAGTATCTCTGTGCTCACTGTGTC TTTGTCTTTTGTATCTTCCACATACAGTGTAGGTCCCCCTTGAAAGGAAA GGCCCTATGATACGGATGCCTAAAGAGGACCTTTCACAGCTCAAGGTTTC ATTAGGGTATTGCCCGCATAGCCCATAGGTCTGTTATCTACAATAGGCCA CTTGCAATGGGCAGAAGGTGAAATTGAATTGGGGGGAATCCGATTTATTC CGACTCTGAATGTTGCACCTTCCATTTGTTTTTTGGAATACCGCCAGATT ATTGGGATTTTTTGTGACAAGTAGCCTAGATATGTCCATATGGCAGTAAT ACATAGTACTAGTAGTAGAGCCACGGACTACACTAGCCCGTGCAGTTCGT GTTATCCTCGACCCACGGACTCGCTGCGCTCGCAGTCGGGGCTCGCGTGG TAGCGAACACCACTGCTCGTTACGCCCGCAGTGGCTCGCTGCGCTCGTAT ACAGATTTATATTTCAAGAGTTACTTGAGCACAGAGGTGAAAACATGTTC CGAAACGACAATCACCTCATCACTAATACCGTGTTCATCAATAGGATGCT TCGAAGTATATATATATATATAGGGTTTGAATTGTTTCATGGGAAAATCT GTCTGCCCCGAAGTGAGCAAGGCCCTCATTATTCAGGAAAGCCTCCAGGT GGGATCTTGAACTCATGGTAAACGTTCAGTGAATATTTAGGGACACTGAG CGCTGTCCTTGCTTACTATGCTGTCCGCTCTTGGTTGGAAGGTGTTTTTC GACAAGCTGGAGCAAGGGGATTGGGGGCATATTTTTGCAGAGGGGGCAAT TCGTCAGCCATGGAGGTAAATTACAGTAGCACGCACGTATTCTATACTAC ACGCCAAGGCCCGCGGTAACGTGGTATCACAGCTGTGTATAATACCATGT ATATAACACTCCTGAGAACATGGTGCTCCTGGGAGAGACTCGCTCTCGCG GGGGCACCGCCTGCTCTATGCGGGTTGGTCTCAAGTCTTGGGATGTAGTG TCAAGCAAGCACTTGGATTTGTTCTGTTGTAGATGAACTGACCATCCAAG GTCGGATATAGCTAGAAGCTGTTCCGAGAAAGGAAAAAAAGTTCATTGGT CTTTGTGTAGGGTGACGGGGTTCAGGAGCCCAGGAATGTCAGGAACATGC TCTCCACACTCCCAGTGAAAAGAAAACTTTTTTAAATCCCGACTTTCGTA CAAGCTATCGTTGATGGCACTGTGCTGGTGACAGCTGAAAGTTAGTTCGC TATAAATATGATCTCGAGATTTGATGTCGTTAGATGGACCGACTGTTTAA GATAGCCCAGTGTCCGTTTCTCGGCGACATCGGGCTTGAAAGAAAGAAAC TCCATCACCTGGAGCATGATAACACTACCGTCTGTTGATCGTCGTGAATT CTTGGTGATGGATCGAGTATTTTGCACCCGATATGTGATGTGTTGTTTGC CCTCATCCTTCGTTTGCTTGCTTGCTTGCTTGCTCCTCCTTCCAAGAGGG TCCTCGCATTTCAATCCGACTGTTGTATTCATTTTGCCTTGCACTTTCAG CGGTTTTTGATGTCCACTTGCTTCCGAAACTCATCATTAAAATTGTCGCA ATTTGACCTAAAAAAAGTTGTGGTATTCTTTTTGGCGGTGAATTAATTGA CAATTTACGATCCTGGTGTACGTTTCTTAAAGGAGTCAACCCTAAGGTGT TTGCGGCCAATACGGCGCCCCAACGAACCGCGGGAAGCTGAAAATTGGAC CATGTGCTGCCAGGGTTCACACCACCTTCTCAGCCAAGTCTCGACTCAAA TGAAGCTATTTTGGAGCGTGCAGAAATGAACGTTGCCCAAATTAGTGTTC GTTTCAAGTCTGCCCTCTATTTTAGGCACTCGCCTCCCTTTCTTGGCTTT CATCCCACACATGAAGGCAGAAAAACCTACTCTATGGAACTTGCCGTCCA GCGACATATATATGCACATGGAACCAAACAGTACGAAATAGGACAATAGA GCTTGCGAGTACTATTTTCAAGATGTTCTTAGCAGCCAGATTTTTTGCGG ATGTTACAATCAAATCTGCATTAGTATTCTTCGTTTTAAAAACGATTATA CGTTATAGGCCCAAAGTTAAAACAGCTCCTCCGTTGGTGAAAGGAGAAGC TTTGTCCTACACTACACGATTAGCGAACGATTTGCCCACAGGATCAAACA GTACGAAACAGGAAAATAGAGCTCGCGAGTACTATTTTCAAGACGTTTTT GGGAACCTAACTGACTAAAATCCGCGAAAATTTGGTTTGAGAACATTTTT CAATTCTGTACTGAAGTAACTCCGGCGAAATGAATCTCCATACGAGTGTA GCGAGTCACTGCGAGCGCAGCGAGTTGTGGGTCGAGGAGGATAAGCACGA AGTGCACGGTTAGCGTAGCCTTCGCCATAATCTAGTACTAAATACTATTA TTTAGTGTATATACTATGCCTCATAGTTCGAAACCTGAATCATCACATGA ACAATCAGTATTGTTCTTTTTGGCTGGAATACGACAACGATATATGCGAT TTAGGTCGTTTCTATCAGAGCCAGGGGCAGCTGTGCGCGTCTAAAATCGC CCGCGGAGGTATAAATGTGTCCATGGAGCTACGATGATTGCCGCTGTGCA GTTTCAGCGGATTCTATTCGTAGATGAGAGCAAACGGTCGACCGAAGCAA AAAAAAATCTACCGCATTACGATCCTGAGTTCTTCGCTGGATCATGACTT TTTTGTAAACGGCGAAAAAGTGTAATACGGCTAAAATGACGCTCCAACGA ATCGCAGCAAGCAGAAAATTGGACCACGTTCTGCCAGAGTTCACACCACT CTCTCAGCCAAGTCTCGATTCAAATGGAGCTATTGTGGAGGGTACAGAAA TGACTTTTGCGCAACTTAGTGTCCGTTTTAAAAACCAGTCCGCTATTTTA GGTACACGTTCGAAACAGCCCTCCCTTTCTTGGCTTTCATCCCACACTAT ACGACGGAAAAACTGCGCCATAGGGCACACCGTTCAGCGAAAGACATATG CCCATAGGACCACAGTACGAAACCGGACAATAGAGCCTACAGGTACTATT TTTGAAATGTTTTTAGGAACCACCACCACCTTTCTGTATTAGATAGTGAA GAGGATGTAAATAGGGTCCTCCTCTAAGATGCATCACCCTCCCCCTTGAC CCACACTCGGGACACGTATTACGCCGCCCTGTCGGAAGGTTCAGCAAGGG TGAGCCGCTGTTGAGCGATTTTAGGGCCGGAATTGGGCGACTTCTCCTGC GCAGCAAGGTGCGATTGTTCGCCTGTTAACGTTTGTTTTTTCGAGAGGTG GTTTATTTTTTTAATAATCGTGAGCTGGAGGCATTGTGCTTCTCCCAAAA CAAAAAGATGGCAGCAATGTTGTAAAAAGAAAGCATTGACTGCCCTGTAT CGTCGTCATCAGCATGATCAGTAGCATCCGTATTTGAAGAGCCCCCCCCC CAGAAAAAAGAAGGATTGAACGTTTTTGTGTCGTGTTCAATTTTTTTTTC TTTTGCTGGGGTGATCGGTTGATTTGTTGGGGAAGAAAGGCAAAAATGAT TCAACGAAAGAAAGAAGACTAATTTCAATGGGTCCTTTTTTGGGAGGAAA TGGTGGACAGCGAATCAATTGTTTTCGTCGGTCAAGAAACGCCTTTTGAG TGGAGAGGGGCAGGAGAGCACGAGCAGAAGAAAGAGGATGCTTTGGGGGA AAATAACCCTGTCGTTGTGTCTATCTTACAGAAAAAAAAAAACAGGACAA AACTGGATAACCACTTGAGTCAATGTCGTCGTTTTTACAAGGATGGGTTA AATAAAAATATGGACTTGTTGCTGTACTTGGCGACACTTGGAGTATGTAA GCACGATGGGGGATGGTTGTGCAAAATCCATCAGCACATAAGCACGGCTT TGGGCTTCCTTTTTCCACGTTTTCATGGGAGTGTTGAGATAAACAACATC AGGCATTGTCGGCTGATAACGAAGAGGTCTGGAATATGGCAATCCTGCTG GGGAGGGTCTATGAAGTAGCTGCACGTTGCGGAGCTCCGCCGATTCTAGG TCTCTTTGGTGCCAGGTGGCAAAAAGTGATGGGAGATTAACGGCTTGTCA CCAAACTGGTTTTCGGGTCGCCGGCAATAAGGGGGCGGTGAAGCGGCTAA TTCGGCGTGTAGTCGAGGGTGGCCGGTCAGTGCCGGGAACTTTCTGGAAG ATGAAATTAGCCTTGGCCTGACCATCAGCTGGTTCCGATAGTGAAAAACA TGTATTCGAAACATTGAATCGAAAGGGAGGAAAGGGAGCAACGTTTTCCG TTCATATTAATATAAATACTACGGTTTACATCGGGTGAACGGAGCCGGTC GAACGGCCCACTTCGAAGGTTATTGTTGGCGGTAAAAAATGAAGAGGTTA TAAGGAAATGAAGGCGAAGAAAGAAGAGAGCATCCCAAGAGTTGAGCAGA AGTCGATACCAAAGAGAGAGATTTTCATGTTGAGTTGGGAGTGTGGGTGT AGAGAGGAGATAGATTCGTCCGAAAGGAAGATGTGGGTGGCAATACTGCG AATCTGTTCAGCTTGAGTATTCTCTCCAGAAAATACTTCGTGTGTCTCTG GGAGTGCTTCGCGGCAAACCGCAAGATCGCGTGGTTCAGCGCCTTGTTGG TTTAGGCGGAAAATTCGATTGATGGTGTGTATTTTGGATTTTGATGTAGC ACAACTGGTTCAGCTATAGGCTGAAGTAGTATTGCTTACGACAATCCATG TTATTCAAAGGACTTCTTGCGTCAGCCCCATATATGAGGTCAGTGATTTG AGATTCCTAGGGGGTATGTGGCGATATAAAAGGGGAGAGGGTGATCACAT GACAGCAGTCAAGTTGTACGTATTTGGAAGATGGTGTGTACACTATTCTC GCGGGGCTCTCTTGAATCGGCAGCTGTTTTTATCCCATGAAGCGGTCAAG ATTATCTCTTTTTGTGGTTTGTGGTCCGCATAATAAAAATCGCCGACGCA GGTGATGATTGTCTGCCAAGGATATTTCGGTATGAAACGGCCGCGAGCAT GTGAACTCTCTTGGAGTAGGACAGCAATCCCAACCGTTTTTGTACAGGAA CGCACCAATGTTTCTGTCCGACTGCCTTCTCCGTCGTTGGCTCTCCTTTT AGTAGATAGTGGAAGTAGGGACCCAGCAACGCACGGACTATGCTGTCGTT GCCATTTTGCCAGGAAAAGGTCACAAGGAGATTGTCTTTAGTTGTGGCTT GTGGATCGCATAATCTCCCAATGTAAAAACATCGTCGATGTGAGTTATGG TTATCCGCCAAGGATATTTCATTATGAAACTGCCACAGACCCGAGAATTC ACTTGTAAGTAAGACGGCATGCCCAACTGTGGTTAAGTATTTATGGCCTC CATTGTTGTTTCTCTTTTTTGTGGATACTTGAATTAGGGGCCCATCGAAG CGTAGATTCTATGTTGTCGTTGTCTGCCGAACCGGTGCTGATCTCCTCTG TCCTCCGTCCGGTCCCATGGGCTGACTATGTCAGTCGGCAAAATGCAAAC ACGGCTGTTTATTATTATTTCTTTTTTTAATTTCAGATGTCGTTTGAGGT ATTTTTTGTGTTTCAGAACTTTTTTTAGTAACTACAATTATACCTTTGTA CTTCACATACCTTTGCGAGAGTGTCTCCCGTGGTACGGAATTTGATGGAA GGTTTTGGACAAGAATTGCAAACCTGTCTTTTAAGCCTTTCCCCAAGTTA TTGTACGTGATGCTGGATGATGACCGTGCACTATTGAATTAATTTCTTAT GACTACCACCGCTTTACTGCGATATATTTGACCGAATCAATATTCGCTTG TCTGCTATTTATTGGCTGTCGGACGCTTCATGGACGAACAAACGTGCCAC CCACAGAAACTGCCCATGGTGCTCCCGATGTACCACATCGGCATGCACCG GGTGGCGCCGGAGGCTCCGGTACAGAAGCACGGGAGGGGAAAATTGGTGA AGATAATTCCCAATTTGGGTGAGAAAAACACAAATCGGTGCGGCAAACAA CAACGAAAGAAGTACGAGGACGTGGGGTCACCCCCCGCGGTTGTATGGCA CGTGATTTATTGCCGATGTCTCTTTGTCCACATTTGTTTTTTTCACAGAA CGGCTTGCTGTACCGTAAGATCGCGACCTTTACGGGGATTCATCGATGTA CATATACTATTTTGGATGTACAGGTTTAGAGGCTTTATATATAGTGTTAG TATTCACAAGTACTCTCTCTTTCTCTCTTTCTCTCTCTCTCTGTCTTGTT ACTTTTTTTACAAGTACTCATGTTCATATTGAGATGGAGTTTGTGTCGTC GTGTTTTCAATTTCCGCAAAACGTAATCCTCAGTTATGCAACGAGGGCTC CATCGCAAATCTGCCCTGTGTGTCTCGTTCCATGTGCTGTGTCGATCCGC TTTCTCGATGCGATGATGTTATGGATTAGGCCAAGAGGTTCGCGTGTACG TGGGAGAGCCGATTGATGTTCGGCCCATCGTGGAGAAATGCAGGGTAAGC TCGCTGCAAAAGACGAACGGGAGACACCTTAACTCACGAAAAGTGTCCCA AAATTACCATCTGATCTTATACGCGCCATGCTGTGTTGTTTTACATAGAA TCCGTCGCGGTCGAAGCTTGCGATGATAGCGCTTGGAACAAAACATATGC ATCTTCGTGATCAGTGGGATATCGTTTCATGGGC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1151:1386..16869-

>mRNA_H-paniculata_contig1151.975.1 ID=mRNA_H-paniculata_contig1151.975.1|Name=mRNA_H-paniculata_contig1151.975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at H-paniculata_contig1151:1386..16869- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGCACTCTGGAGCAACCCTTCTGAAGATTTTCTCGTGGTGGTGTTA
CTACGTATTTTCTATCCCTCCCACTTCACTGGCTTTTGTTTCTGCACCTG
CCCCACCTTCCAACGCCCGATTTCAATATCGATACCTTGGATGAGGCACT
CTGGAGCAACCCTTCTGAAGATTTTCTCGTGGTGGTGTTACTACGTATTT
TCTATCCCTCCCACTTCACTGGCTTTTGTTTCTGCACCTGCCCCACCTTC
CAACGCCCGATTTCAATATCGATACCTTGGTCCCGCGAGATTCACTTCAC
GTGCTGCTGCGCATCATCGTCATCGCCAACATCACCAATATCAACATCAT
CTGCAACAGAACAAGACCGGGCCGCTCTTTTCTATAACATCGCCACTGCC
ATCGACTGAGGCATCCTTTCTTCTGCCGGAGAAGAAACAAGAATTCGCCC
CTCCGGCTGCTGCTGCTGCTGCCTCTGTGCCGATCGCTGGTACTAGTGAG
AGCGGAATCACAGACGATGGAGTATCAGCATCTTCTCCGGTAGCCCCAAC
GAATGTCGCTGCTGTGGCTGCATGCACCAAGACGATAGCAATTGACCCAA
GGAAAGGGAAAGGAGGCCTTGGACGGATGATGCAGAGGCTTTTGTCTTTC
ATGATCATGGTAACCACTACATATTTGTTCCGTTTCCTGCTCCAAGGACT
CAACAAGTCCCGCGAGATTCACTTCACGTGCTGCTGCGCATCATCGTCAT
CGCCAACATCACCAATATCAACATCATCTGCAACAGAACAAGACCGGGCC
GCTCTTTTCTATAACATCGCCACTGCCATCGACTGAGGCATCCTTTCTTC
TGCCGGAGAAGAAACAAGAATTCGCCCCTCCGGCTGCTGCTGCTGCTGCC
TCTGTGCCGATCGCTGGTACTAGTGAGAGCGGAATCACAGACGATGGAGT
ATCAGCATCTTCTCCGGTAGCCCCAACGAATGTCGCTGCTGTGGCTGCAT
GCACCAAGACGATAGCAATTGACCCAAGGAAAGGGAAAGGAGGCCTTGGA
CGGATGATGCAGAGGCTTTTGTCTTTCATGATCATGGTAACCACTACATA
TTTGTTCCGTTTCCTGCTCCAAGGACTCAACAAGGTGAGGTGTCAAAACC
ACCAGGGCTTACTGGACGCTATCTTCGACAGGGGAGACCAAGGTCTGTTA
ACCGTCAGCAACCACTGCAGCGTGTACGATGACCCCGGCCTGTGGGCGGC
GCTTGTGCCGATATGGCGGTGAGGTGTCAAAACCACCAGGGCTTACTGGA
CGCTATCTTCGACAGGGGAGACCAAGGTCTGTTAACCGTCAGCAACCACT
GCAGCGTGTACGATGACCCCGGCCTGTGGGCGGCGCTTGTGCCGATATGG
CGGACACGTCGTGGGAAAATGCGGTGGTCGATGTGCACGGATGATATTTA
CAACGCGAATCCACTACTCAGAGCGATATTTAGAGCTGGGAAGACCCTCC
CCGTCAAACGCACTCGGGGGATGGAGCAACCGTATTTTAAGGACACGTCG
TGGGAAAATGCGGTGGTCGATGTGCACGGATGATATTTACAACGCGAATC
CACTACTCAGAGCGATATTTAGAGCTGGGAAGACCCTCCCCGTCAAACGC
ACTCGGGGGATGGAGCAACCGTATTTTAAGGTGTTTTTCGACAAGCTGGA
GCAAGGGGATTGGGGGCATATTTTTGCAGAGGGGGCAATTCGTCAGCCAT
GGAGGTGTTTTTCGACAAGCTGGAGCAAGGGGATTGGGGGCATATTTTTG
CAGAGGGGGCAATTCGTCAGCCATGGAGGTTCAGCAAGGGTGAGCCGCTG
TTGAGCGATTTTAGGGCCGGAATTGGGCGACTTCTCCTGCGCAGCAAGGT
TCAGCAAGGGTGAGCCGCTGTTGAGCGATTTTAGGGCCGGAATTGGGCGA
CTTCTCCTGCGCAGCAAGAAACTGCCCATGGTGCTCCCGATGTACCACAT
CGGCATGCACCGGGTGGCGCCGGAGGCTCCGGTACAGAAGCACGGGAGGG
GAAAATTGGTGAAGATAATTCCCAATTTGGAAACTGCCCATGGTGCTCCC
GATGTACCACATCGGCATGCACCGGGTGGCGCCGGAGGCTCCGGTACAGA
AGCACGGGAGGGGAAAATTGGTGAAGATAATTCCCAATTTGGGCCAAGAG
GTTCGCGTGTACGTGGGAGAGCCGATTGATGTTCGGCCCATCGTGGAGAA
ATGCAGGGTAAGCTCGCTGCAAAAGACGAACGGGAGACACCTTAACTCAC
GAAAAGTGTCCCAAAATTACCATCTGATCTTATACGCGCCATGCTGTGTT
GTTTTACATAGAATCCGTCGCGGTCGAAGCTTGCGATGAGCCAAGAGGTT
CGCGTGTACGTGGGAGAGCCGATTGATGTTCGGCCCATCGTGGAGAAATG
CAGGGTAAGCTCGCTGCAAAAGACGAACGGGAGACACCTTAACTCACGAA
AAGTGTCCCAAAATTACCATCTGATCTTATACGCGCCATGCTGTGTTGTT
TTACATAGAATCCGTCGCGGTCGAAGCTTGCGATGA
back to top