prot_H-paniculata_contig11506.973.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11506.973.1 vs. uniprot
Match: A0A0J7K9Z2_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K9Z2_LASNI) HSP 1 Score: 57.4 bits (137), Expect = 9.280e-7 Identity = 45/152 (29.61%), Postives = 71/152 (46.71%), Query Frame = 0 Query: 1 MERFEINAASELSTASLGCLGPSRGDEEGGAWPFRAAVGCLVWLAMMTRLYIANSERDLAGHSHITCSRHWTAVLEIVSYLNGD-----RFSRV----ELDSSAIAHFASSVWTGISLSVVAVMLRGRVVSFSSSTQHWLVCERCALLLVTE 143 ++RF + A+ +STA C DEE P+R AVGCL++LA+ TRL IA + + +HW + +I Y+ G R+S L++ + A +AS T S+S + + G + ++S Q C L TE Sbjct: 312 LKRFNMEDANPVSTAIEKCQLMEEADEELTDVPYREAVGCLMYLAVATRLDIAYAVNYASQFLEKPGQQHWAIIKQIFKYIKGTIGLEIRYSAAWKTGVLEAYSDAGYASDTTTRKSISGIVLKYSGEAIVWASRRQD------CVSLSTTE 457
BLAST of mRNA_H-paniculata_contig11506.973.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 1.230e-6 Identity = 36/135 (26.67%), Postives = 66/135 (48.89%), Query Frame = 0 Query: 1 MERFEINAASELSTASLGCLGPSRGDEEGGAWPFRAAVGCLVWLAMMTRLYIANSERDLAGHSHITCSRHWTAVLEIVSYLNGDRFSRVELDSSA---IAHFASSVWTGI----SLSVVAVMLRGRVVSFSSSTQ 128 + RF++ + S + + LGP +GDE+GG WP R A+G ++W++ +R ++ + R W A+ +IV Y G R + + +A + + + S+S +A + G V+S S+TQ Sbjct: 263 VRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAVRA------------WDAIQKIVGYSKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVISHGSNTQ 385
BLAST of mRNA_H-paniculata_contig11506.973.1 vs. uniprot
Match: A0A6H5JRZ9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ9_9PHAE) HSP 1 Score: 53.9 bits (128), Expect = 1.400e-5 Identity = 44/152 (28.95%), Postives = 64/152 (42.11%), Query Frame = 0 Query: 2 ERFEINAASELSTASLGCLGPSRGDEEGGAWPFRAAVGCLVWLAMMTRLYIANSERDLAGHSHITCSRHWTAVLEIVSYLNGDRFSRVELDSSAI----------AHFASSVWTGISLSVVAVMLRGRVVSFSSSTQHWLVCERCALLLVTE 143 ER+ + + + L DE PFRA VG L+W+A++TR IANS R +A +S HW A L I+ Y + S + A +AS S+S VM G +++ S TQ +C L T+ Sbjct: 183 ERYGVEWGGGIPLPTTWKLWDFDADEPSVEHPFRALVGSLLWIALLTRPDIANSVRAVARYSGAPKLIHWKAALSILGYAVRTSSFGISFQSGTVSGFSLITFVNADYASRAADRRSVSGGVVMCAGGAIAWFSKTQ------KCVTLSTTQ 328
BLAST of mRNA_H-paniculata_contig11506.973.1 vs. uniprot
Match: A0A6H5KKT4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKT4_9PHAE) HSP 1 Score: 53.9 bits (128), Expect = 1.580e-5 Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = 0 Query: 32 WPFRAAVGCLVWLAMMTRLYIANSERDLAGHSHITCSRHWTAVLEIVSYLN-----GDRFSRVELDSSAI-----AHFASSVWTGISLSVVAVMLRGRVVSFSSSTQHWLVCERCALLLVTE 143 +PFRA VG L+W+A++TR IANS R +A + HW A I+ Y+ G F R + S++ A +AS S+S VM G +++ S TQ +C L T+ Sbjct: 683 YPFRALVGSLLWIALLTRPDIANSVRAVARYCSAPTLIHWKAARSILGYVVRASSLGTSFQRGTVSGSSLIAFVDADYASRAAHRRSVSGGVVMYAGGAIAWFSKTQ------KCVTLSTTQ 798 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11506.973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig11506.973.1 ID=prot_H-paniculata_contig11506.973.1|Name=mRNA_H-paniculata_contig11506.973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bpback to top |