mRNA_H-paniculata_contig11501.970.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11501.970.1
Unique NamemRNA_H-paniculata_contig11501.970.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A6H5KTF5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF5_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 7.780e-130
Identity = 201/254 (79.13%), Postives = 224/254 (88.19%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750
            +VRKPGVEGTLQADLGFLYI SRLLE+LQPELGRTSF+AI SD+RTAMLDELDFRKEA NI  FT FL RAGI +AV    Y+ LSS+RLLVMER KGV LTDL+GIK  S+NPEATLITALNTWSMSVMMA+SFHADVHAGNLLVLEDGRVGFIDFGIVGRIP+ VW+SLRDLSNGFI+ +YRLMA SLVKMGAADGEV+  AFAFDIE+V++ +GSMEA+VDT+ VIDE TG VSYGTSVN DQE  + L+L
Sbjct:  302 KVRKPGVEGTLQADLGFLYIASRLLEILQPELGRTSFAAIASDIRTAMLDELDFRKEAKNIEDFTGFLGRAGILDAVAPKVYEDLSSKRLLVMERLKGVALTDLDGIKDYSSNPEATLITALNTWSMSVMMAESFHADVHAGNLLVLEDGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSTVIDEDTGNVSYGTSVNFDQESITRLLL 555          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: D8LPN0_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN0_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 1.760e-124
Identity = 193/253 (76.28%), Postives = 214/253 (84.58%), Query Frame = 1
Query:    4 VRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750
            VRKPGVEGTLQADLGFLYI SRLLE+LQPELGRTSF+AI SD+RTAMLDELDFRKEA NI  FT FLDRAGI +AV    Y+ LSS+RLLVMER KGV LTDLEGIK  S+NPEATLITALNTWSMSVMMA+SFHAD           GRVGFIDFGIVGRIP+ VW+SLRDLSNGFI+ +YRLMA SLVKMGAADGEV+  AFAFDIE+V++ +GSMEA+VDT+AVIDE TG VSYGTSVN DQE  + L+L
Sbjct:    2 VRKPGVEGTLQADLGFLYIASRLLEILQPELGRTSFAAIASDIRTAMLDELDFRKEAKNIEDFTGFLDRAGILDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHAD-----------GRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLL 243          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A835YPW4_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW4_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.360e-99
Identity = 158/247 (63.97%), Postives = 188/247 (76.11%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQE 729
            +V+KPG EG LQADLGFL+I SR++E+LQPEL RTSFS IV D+R +MLDELDF KEA NI  F  FL  A +T+A    VY  LS+ R+L MER KGVPLTD+EGI+R S NPEATLI ALNTWS+SVMM +SFHADVHAGNLLVLEDGRVGFIDFGIVGRIP+RVW ++RDLS G ++ DYR MA +LV+MGA DG V++ AFA DIE +  R+  M+  V    + D  TGRV    S+N  QE
Sbjct:  218 KVQKPGAEGVLQADLGFLFIASRVVELLQPELARTSFSNIVGDIRASMLDELDFGKEADNIDEFLQFLSDADVTQATAPRVYRSLSTRRVLTMERLKGVPLTDIEGIRRYSANPEATLINALNTWSLSVMMCNSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPKRVWGAVRDLSAGVVAGDYRAMALALVQMGATDGVVDIDAFALDIEGIFLRLARMDRDVQVAPMADPVTGRVGVAASLNFQQE 464          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A6T5M278_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M278_HETAK)

HSP 1 Score: 260 bits (665), Expect = 2.960e-81
Identity = 138/255 (54.12%), Postives = 180/255 (70.59%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA-----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750
            +V+KPGV   L+ADLGFLY+ SR+LE+L PELGR + + I  D+RT+MLDELDF KEA NIA F DFL R G+T       VY +LS  R+L MERF GVPLTDL+ I+R S+ PE TLI ALNTW+ SV++ D+FHADVHAGNLLVL+DGRVGFIDFGIVGRIP ++W S+  L+  F+  DYR MA ++V MGAA+ EV+V  F  D++++ E++     ++D   ++  G G   +   V  DQ   + LVL
Sbjct:  179 KVQKPGVADILKADLGFLYVTSRVLELLSPELGRVALADIAGDIRTSMLDELDFTKEAANIAEFRDFLVREGLTGVAAAPRVYPELSGRRVLCMERFDGVPLTDLDNIRRYSSQPEKTLIDALNTWTASVLLCDTFHADVHAGNLLVLQDGRVGFIDFGIVGRIPPKIWNSITKLAECFVGGDYRGMAEAMVAMGAAEREVDVARFGRDLQQLGEQL----LQLDPELMVAGGPG--GFEAQVQFDQNRVTELVL 427          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A4D9CYJ6_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYJ6_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.370e-74
Identity = 124/254 (48.82%), Postives = 178/254 (70.08%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750
            +V KPGV  TL+ADLGF+Y+ SRL+E L P+L RTS   IV+D+R+++L+E+DF KE  N+  F  FLD+AG+T A    VY +LS+ ++L MER +GV L DLEGI+  +++PE  LITALNTWS+SV++  SFHADVH+GNLLVLEDGRVGFIDFGIVGR+    W ++ ++  GF+ +DY+ +A  L++MGA    V+    A D+E + ER+ +++ +V   A ++  T       SV VD++  + L+L
Sbjct:  199 KVLKPGVTDTLKADLGFIYLASRLIETLAPDLARTSLGDIVADIRSSILEEVDFSKEQANLEEFRMFLDQAGVTAATCPKVYPELSTRKVLTMERLRGVSLIDLEGIRAYTDDPEGALITALNTWSLSVVLCPSFHADVHSGNLLVLEDGRVGFIDFGIVGRLSPETWRAVTEVGEGFVGQDYQQIAQGLIRMGATAAAVDEEKLAADLEALFERVRTLDPQVVVVADMEAQTA----AASVAVDEDQVTRLLL 448          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A813CAD1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CAD1_9DINO)

HSP 1 Score: 237 bits (604), Expect = 2.480e-73
Identity = 123/247 (49.80%), Postives = 168/247 (68.02%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV-----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQ 726
            +V+KPGV+  LQADLGFL++ +R LE L PEL RTS   I+S++R++MLDELDF KE  N+ +F  FL + G+         + + S +++L ME F GVPLTDLEGI++ S+NPE TLI ALN WS+SV   + FHADVHAGNLLVLEDGRVGFIDFGIVGRIP ++W+++   +  F + D   MA +L+ MGA D  V+  A A D++ V+ RI  ++ +V    +  +G GRV     ++ DQ
Sbjct:   68 KVQKPGVQQVLQADLGFLFLAARTLEFLSPELARTSVVDILSEIRSSMLDELDFTKEMDNLETFRSFLQQNGLERIAAAPRTFPEASGKKVLTMELFSGVPLTDLEGIRQYSSNPEQTLINALNVWSLSVRACEIFHADVHAGNLLVLEDGRVGFIDFGIVGRIPPKIWSAVEGFALSFAANDAAGMAKNLIAMGATDRFVDESALASDVQNVLSRIAGLQPEV---VLRGKGDGRVVAEVGLDNDQ 311          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A8J6CCQ0_DIALT (ABC1 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCQ0_DIALT)

HSP 1 Score: 241 bits (615), Expect = 2.760e-73
Identity = 132/255 (51.76%), Postives = 167/255 (65.49%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV-----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750
            +V+KPG    LQADLGFL + SR+LE + P LGR S + IVSD+RT ML ELDFR+EA N+  F  FL  AG+T+       Y   S  R+L MER  GVPLTDL+GI+  S NPE TLI ALNTWS+SV+ +  FHADVHAGNLLVL DGRVGFIDFGIVGRIP + W++++ L  G +  D+ L+A S+V MGA  G VNV   A DIE +  +  +++ ++  T +  EG  R      V VD E  + L L
Sbjct:  219 KVQKPGTRDVLQADLGFLAVASRVLEFVAPSLGRLSLAGIVSDLRTTMLGELDFRQEAKNLGEFATFLRTAGLTDVSTCPRPYPAASGARVLTMERLYGVPLTDLDGIRAYSPNPEQTLINALNTWSLSVVASPFFHADVHAGNLLVLRDGRVGFIDFGIVGRIPPQTWSAVQGLGTGLVQSDWTLVAESMVAMGATSGAVNVQQLARDIEALALKAQTIDPQLSATVL--EGQVRAQ----VTVDSEAVTRLTL 467          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A812XC71_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XC71_9DINO)

HSP 1 Score: 242 bits (617), Expect = 3.380e-73
Identity = 125/247 (50.61%), Postives = 170/247 (68.83%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGI-----TEAVYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQ 726
            +V+KPGVE  LQADLGFL++ +R LE L P+L RTS   I+S++R++MLDELDF KE  N+ +F  FL + G+         + + S +++L ME F+GVPLTDL+GI++ S+NPE TLI ALN WS+SV   + FHADVHAGNLLVLEDGRVGFIDFGIVGRIP R+W ++  L+  F   D + MA +L+ MGA D  VN  A A D+++V+ RI  ++ +V    +  +G GRV     ++ DQ
Sbjct:  254 KVQKPGVEQVLQADLGFLFLAARTLEFLSPDLARTSVVDILSEIRSSMLDELDFTKEMENLETFRSFLQQKGLEPIAAAPRTFPEASGKKVLTMELFQGVPLTDLQGIRQYSSNPEETLINALNVWSLSVRACEIFHADVHAGNLLVLEDGRVGFIDFGIVGRIPPRIWDAVEGLAFSFAGNDAKGMAKNLIAMGATDSFVNESALASDVQKVLSRIAGLQPEV---VLRGKGDGRVVAEVGLDNDQ 497          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A096P9Y7_OSTTA (Protein kinase-like domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P9Y7_OSTTA)

HSP 1 Score: 238 bits (606), Expect = 7.450e-72
Identity = 125/249 (50.20%), Postives = 172/249 (69.08%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA-----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSN-NPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQE 729
            +V KP VE TL+ADL F+ I S++L+ L PEL RTS   IV D+R +ML+E DFRKEA N+A+F  +L+ AG+T+      VYDQ S++R++VME F GVPLTDLE I+  +  +PE TL+ ALN W  SV+ A+SFHADVHAGNL+V EDGRVGFIDFGIVGRI   +W +++       ++DYR MA +LV MGA DG+V++  FA D+ RV + + S+E  V    ++++     +   +V VDQ+
Sbjct:  220 KVLKPNVEDTLKADLSFVLIVSKVLQFLNPELSRTSLVDIVGDIRESMLEETDFRKEAANVAAFRRYLEDAGLTDIAKAPYVYDQFSNKRVMVMEYFSGVPLTDLEAIRSVTTRDPEQTLVNALNVWFGSVLAAESFHADVHAGNLIVCEDGRVGFIDFGIVGRISPSIWGAVQAFFQSTAARDYRRMALALVTMGATDGDVDIDKFAADLRRVYKTLDSIEPSV----IVEQDDYTGAQRAAVAVDQQ 464          
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A7S2RT86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT86_9STRA)

HSP 1 Score: 239 bits (609), Expect = 8.110e-72
Identity = 127/247 (51.42%), Postives = 166/247 (67.21%), Query Frame = 1
Query:    1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV-----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQ 726
            +V+KPGV  TLQADLGFL +  + +E L P+L R S + +V+D+R  ML ELDFR E   +  F  FL+  G+ +       Y Q SS+++L MER  GVPL DLEGI++ S+NPE TLI ALNTW++SV+    FHADVHAGNLLVLEDGRVGFIDFGIVGRIP ++W +L+D++ G   +D+  +A  LV MGA D EV++ AFA D+ RVVE I  +  +V    V D   G V+ G  V+  Q
Sbjct:  275 KVQKPGVAETLQADLGFLAVAGKAIEFLAPDLRRLSLANVVADLRELMLGELDFRAEGQCLGEFRQFLEENGLEDVATAPCYYPQASSKKVLTMERLYGVPLVDLEGIRKYSSNPEQTLINALNTWTLSVIACPFFHADVHAGNLLVLEDGRVGFIDFGIVGRIPSKIWGALQDVAVGAAGEDWVQVAQGLVAMGATDQEVDIQAFAEDLRRVVEAINEINPQV---VVQDNMDGTVAAGIGVDEQQ 518          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTF5_9PHAE7.780e-13079.13Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LPN0_ECTSI1.760e-12476.28ABC1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YPW4_9STRA1.360e-9963.97ABC1 family-domain-containing protein n=1 Tax=Trib... [more]
A0A6T5M278_HETAK2.960e-8154.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CYJ6_9STRA2.370e-7448.82ABC1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A813CAD1_9DINO2.480e-7349.80Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A8J6CCQ0_DIALT2.760e-7351.76ABC1 domain-containing protein n=2 Tax=Diacronema ... [more]
A0A812XC71_9DINO3.380e-7350.61Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A096P9Y7_OSTTA7.450e-7250.20Protein kinase-like domain n=2 Tax=Ostreococcus ta... [more]
A0A7S2RT86_9STRA8.110e-7251.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11501contigH-paniculata_contig11501:1548..6061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.7
Seed ortholog evalue8.6e-99
Seed eggNOG ortholog2880.D8LPN0
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0010287,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
Ec32 ortholog descriptionUbiB domain
Ec32 orthologEc-06_004750.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Exons6
Model size750
Cds size750
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11501.970.1prot_H-paniculata_contig11501.970.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11501 1548..6061 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928856.41129-CDS-H-paniculata_contig11501:1547..17851622928856.41129-CDS-H-paniculata_contig11501:1547..1785Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 1548..1785 -
1691480647.1284077-CDS-H-paniculata_contig11501:1547..17851691480647.1284077-CDS-H-paniculata_contig11501:1547..1785Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 1548..1785 -
1622928856.4239643-CDS-H-paniculata_contig11501:3201..33141622928856.4239643-CDS-H-paniculata_contig11501:3201..3314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 3202..3314 -
1691480647.1432867-CDS-H-paniculata_contig11501:3201..33141691480647.1432867-CDS-H-paniculata_contig11501:3201..3314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 3202..3314 -
1622928856.4351375-CDS-H-paniculata_contig11501:3929..41001622928856.4351375-CDS-H-paniculata_contig11501:3929..4100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 3930..4100 -
1691480647.1599646-CDS-H-paniculata_contig11501:3929..41001691480647.1599646-CDS-H-paniculata_contig11501:3929..4100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 3930..4100 -
1622928856.4484727-CDS-H-paniculata_contig11501:4815..49091622928856.4484727-CDS-H-paniculata_contig11501:4815..4909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 4816..4909 -
1691480647.1718497-CDS-H-paniculata_contig11501:4815..49091691480647.1718497-CDS-H-paniculata_contig11501:4815..4909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 4816..4909 -
1622928856.4603233-CDS-H-paniculata_contig11501:5409..54751622928856.4603233-CDS-H-paniculata_contig11501:5409..5475Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 5410..5475 -
1691480647.1796136-CDS-H-paniculata_contig11501:5409..54751691480647.1796136-CDS-H-paniculata_contig11501:5409..5475Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 5410..5475 -
1622928856.4697533-CDS-H-paniculata_contig11501:5993..60611622928856.4697533-CDS-H-paniculata_contig11501:5993..6061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 5994..6061 -
1691480647.1872735-CDS-H-paniculata_contig11501:5993..60611691480647.1872735-CDS-H-paniculata_contig11501:5993..6061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11501 5994..6061 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11501.970.1

>prot_H-paniculata_contig11501.970.1 ID=prot_H-paniculata_contig11501.970.1|Name=mRNA_H-paniculata_contig11501.970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLD
ELDFRKEAGNIASFTDFLDRAGITEAVYDQLSSERLLVMERFKGVPLTDL
EGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGF
IDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGA
FAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL
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mRNA from alignment at H-paniculata_contig11501:1548..6061-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11501.970.1 ID=mRNA_H-paniculata_contig11501.970.1|Name=mRNA_H-paniculata_contig11501.970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4514bp|location=Sequence derived from alignment at H-paniculata_contig11501:1548..6061- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTCCGCAAGCCCGGGGTAGAAGGAACTCTACAGGCTGACCTAGGCTT CCTCTATATCGGCTCGAGGTGAGAACCTGCCAACGGGAAAGGGGTATTTA CAATAGAACTCAGACTACTTGTTTCTTGAGTGTGACGGAGCAGTTTTCGT CTTGAAGACCGTGCGCGATTTTTAAGCGTGTGTGTCTTGGGAGAAGGGAA AGTCGTCTCTATTCACGATCTCTTGCGGTATCTTCTCTCCTTTGGTCTGG CAAAAGTGATCATAACCACTTCCATTCCATGAAATGATTCAGCTAAATGT CTTGATCGACCCGAGAGTTTTTAGTTGGTAACTCTAGTAAAAAATTGTAC TAACGAGAACAAGGAGATGAGGCTAACAGGGAAAAAAGTGATGAAGGGGA AAGAAAACGGGGAAACAGAAGTCACGAGGGGCAAAAGGACTGGCTGTTTT TAGGATTTTGCTAGGGTCCTGCTCCACTGTTGTTAACATGCACATATCTC CAGACATTTCTCTGTGCGTATAATTGCTGTCAATAGTAGATCTTAGAGTC TCCCCCCCCCTCCCTCCTTCCGTTCGGGATGTTTAGGTTGCTGGAGGTTT TGCAGCCGGAGCTAGGGCGGACTTCATTTTCGGCGATCGTAAGCGACGTC AGGTGAGCTTTGCGGTGATTTTTCGAACCATTGTTGGAAGGCGAAACCCT GTCAGCCGGGGTGGATGCTAACTAGAGCAGTCTGTTGTGATTGACCGATT CGTTTGAGTACACGTACGTGTTTGTGACGTAAGACATGAAAACACTTTTA GTAAGCTGTAAGGTATAATATCTGACTCTTTGGTGCAGGGTTGCAAAGCT AACTACTCAGCGGTATTTGTTATTTAGCCTTGGCAGTTGTCATGTTCCGA TTCTTGTACATTAAGCACTTTTTTTTTTGTGTGTCTCGGGTTCAGCTGTT GTGCTGCACGCGGTAGAAAATGGTTTTTGAGTTATGTTGCTCGTGCCGAT CTACGTTACAGACACGAGCTATTGTACATACGGCGGCGCATTCGGTACAA AATTACAATTCACGTACACACATTCGTCCTGTTTTCACAAGCCGTTGAGT CCACTGTTTCGTCAGTACAGTCAAATAACTAGCAACCCGTGTATATCTGC AGGACGGCCATGCTGGACGAGCTGGACTTCCGCAAAGAGGCTGGCAACAT TGCGAGCTTCACCGATTTCCTTGATCGGGCGGGAATCACGGAGGCTGTCG CCCCGAAGGCAAGCGGACCAAAGTCGATGCCAATTTTTTTTTAGTATTGA CCACTCTCACACGCTCAAGTGGTGGTGTAGTGGTGATGCGCGTTTCGGGA AAAAAAAGCAGAAGCAATGCTGTACTCTCAAGTAACATCTGAAAACGAAC CTTCATCGGCGTTGTGCCTACGTGCACGCGCAGCGCGCCGTATTGCGTGG GTCATGGGGTTTGGGATAATGACTAAATGGGTACGAGGACAAAACACATG CCACCGGTTGTAGCCATTGCTGTACCAGTAGTATCAAAATCAACGCGCTT ATCGCTGTGGTAGGTTGTTTATATCTTTCGGGACAATTTGTCACCACTTG GAAATTGATTCTGTTCGAAGCGTTGTTGTTTTTTGCACACTGCAACTTAT GAGAGTACAACAAGACCCGTTGTTCCGAGGGGGCTAGTTGGTGTTCGCAT ACATGTCGAAAGGGGGTTGGTTCAACAATAGAGGCAGAAAAACAGTAGCT GGCTGCACTGGAATAGCCATGGTTACCTGCAACGGCGGAACTTCTGTATA CTGTAGTCGGAAATGTCTGTGTACCGTTGTGACATGCTTGAGTGTATCGA ACAGAGGTTCTTGTATCTTCTCGGCCTTCCCCTCTTTGAAAAAGCGAACC CTCTGATCCATGGGTTGATGATGATTGTCACTGCCTCCTTATCCACCGAC AAAAATAACAGGTGTACGACCAGCTTAGCTCGGAGAGGCTACTGGTGATG GAGCGTTTTAAGGGGGTTCCTCTCACGGATTTGGAGGGCATCAAACGGTG CAGCAATAATCCCGAGGCCACTCTCATCACAGCCCTCAACACATGGAGCA TGAGTGTCATGATGGCTGATTCCTTCCACGCGGTGAGATAGCAGAGCAAA CCAAACAACAGAATAGAGAAGAACAGAACACGATTCATCCCGCGTGGTGA GATAGCAGAGTAAACTGATCCACAACACAGCAGAACTCAACAAGGTGGAG CGAAGCGTGTTTTCCGACGGTTATAGGGATCCCTGAACCTATTCTCCCTT AGGTTGACACCCTACGTTGGGTGTCCCTAATACAGTACTGCCCTAAGATG CGAGAGCGGCTGGCTTCGGAGTCCACGTAAAGACAGGATTTAATATCTTT ATCAAAGGCTGGGTCGTCCTCACTCTCCACGATCCTAAAAAAATGGTGTT TATCGGCACCCCACATCTGAAGAAAGATGTAGTTTACGCTTAGCATTCGG TCTTGATCAACCAGTTGTCCACGAGATACAGTGAACACTGGGTGTTCACA ACAAAACGAAACCAAGAAGGGGCGGGCGGGGGAGGGGGGGGGTGCTGTAA ATTACTTTTCCTACCCGTGAGTGATGTCAGTGTTGTCAATGTTGTCAATG TTTCATCCCAACTTCTTTTTGCGCACCTTTTGTGGATAATTCATGTGATA TCTACATGCAGCAGTATCTTGCACTGTAATCGTATAACTTACAACAGGAT GTCCACGCGGGAAACTTGTTGGTACTGGAAGATGGGCGCGTGGGATTCAT CGACTTCGGAATCGTGGGGCGAATCCCGCAAAGAGTGTGGGCCTCTCTTC GCGACCTTAGGTACGATCTTGTAATACATACTTTTTAAAGACGGACGGGG GGTAATTATGGAGACGCGTACCGTAGTCAAAGAACACGGAGTGCACATTC CCATGTAATGTAGAAATACTAGGGTAAAATACTCATGTATGGAAGCATCG GTAAAGGTTTTTGCCTCAGTCTTCCGAGTGTTACAAAAAAAAAAAAAAAT CCCATGTAATATGCGGAATGGGTCGATGTGCAGGATGTTCGCCTGCCCAG GGCTGCCTTTTACAAAGACAATGTCGGGCGCTAGGTGCTATATAGTCATT GCTATAATAGGTGCACCATCTGGGATTCGCCACGGCAACCAAATGTTGTA CATTCTTCAGGCGTGACAATAGCCCCATAAACACCGCAACTTGTTAATAA TGTCGCGATTGCACAGCGTACACAACACATTGTAGAGCATGGCGTGCTGC GGGCAGAGAATGATCGCGAGTAGTTTTGCTTTGTTGTGTTTTAGCTGTCA AGTCATGCGTTCTGCAGATAGCCAGCCTACCGAGTGTGAACTCGTCGACC GAGGTCAACACGCTCCTCATGCCCTACGTACACCAATTTCACAATTTCTT CCACAAGAGATCCCGGGGGAGGGAGGGGGTATGGTCGTGGTGCTGTAGGC GCCTGTGTTTTCAGATTACTAGCCTAGGCGATTGTTTTGAAACTATAGGG GTATTATTCAATGCAAGGGTAGATCATTGGAGCGTGTATTTGCTCCCAAA AAGCTTGCGGCGAATTCGGACGGGAGCCAGGACACACCGCGAACGAAAAT GTGGAGCTTGTGAAGAAGAAGATGGCATGCATGCAAAAATGTGTGCGTAT CAATTGTAGAGCGCTTATCGATGTGGACCGGTTGCGACATACACGTGAAT AATATGAATAACATGTTTTCCACCCCTTGGACTCGAACTAGAATGATGAT AAGCGGTTACGCCCTCGCCAACCCTCCGTCTTTCCTAGCGAAAGACCTGC GGCCGATAAAATGAGTTATCGAATAGCAAAAAGAAGGGTGTACTTGGTGC ATTATTACCTCCACCCCCCCCTAAGCAACAGCAGTTAAGATGGGACTAAT TTCGCAAGCGGTCGTCTCCCGGGGTTTGAACAACCAACAACGCTTCATTA GGCGTTGAGGGGGCGGTAAGTGATCCGCAAACGAGCGAAGAACTACGGCA GACAGGACATGCTCCTGTCAGTTCGTTCGGCCACCGGCCCGCCCTACCCG CCCTTCCCGCCCCCGCACACCTCATTCCTTACACCCCATCTAATATTTTT TGACTGATGAGTAGCATCATCGGTATTTCTTTTGTCATGAGTTGGTAACA CATGAAGGCGTGCTCCTCCTCCCCCTACGTCCTCTCCCTCGCCCCCATCC ACACCCTGCACGGCCTGCCCCCCTAGCAACGGTTTTATTTCGAAGGACTA TCGTCTCATGGCGGCATCTCTGGTAAAGATGGGAGCTGCGGACGGGGAGG TGAACGTGGGCGCATTCGCTTTTGACATCGAGCGCGTGGTGGAGCGTATA GGGTCGATGGAGGCGAAGGTCGACACGACGGCCGTAATTGACGAGGGCAC CGGTCGCGTGTCATACGGCACTTCTGTCAATGTGGATCAAGAGGTGGGTA GTTGGCTCGTGCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig11501:1548..6061-

>mRNA_H-paniculata_contig11501.970.1 ID=mRNA_H-paniculata_contig11501.970.1|Name=mRNA_H-paniculata_contig11501.970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig11501:1548..6061- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTCCGCAAGCCCGGGGTAGAAGGAACTCTACAGGCTGACCTAGGCTT
CCTCTATATCGGCTCGAGCAGGTCCGCAAGCCCGGGGTAGAAGGAACTCT
ACAGGCTGACCTAGGCTTCCTCTATATCGGCTCGAGGTTGCTGGAGGTTT
TGCAGCCGGAGCTAGGGCGGACTTCATTTTCGGCGATCGTAAGCGACGTC
AGGTTGCTGGAGGTTTTGCAGCCGGAGCTAGGGCGGACTTCATTTTCGGC
GATCGTAAGCGACGTCAGGACGGCCATGCTGGACGAGCTGGACTTCCGCA
AAGAGGCTGGCAACATTGCGAGCTTCACCGATTTCCTTGATCGGGCGGGA
ATCACGGAGGCTGACGGCCATGCTGGACGAGCTGGACTTCCGCAAAGAGG
CTGGCAACATTGCGAGCTTCACCGATTTCCTTGATCGGGCGGGAATCACG
GAGGCTGTGTACGACCAGCTTAGCTCGGAGAGGCTACTGGTGATGGAGCG
TTTTAAGGGGGTTCCTCTCACGGATTTGGAGGGCATCAAACGGTGCAGCA
ATAATCCCGAGGCCACTCTCATCACAGCCCTCAACACATGGAGCATGAGT
GTCATGATGGCTGATTCCTTCCACGCGGTGTACGACCAGCTTAGCTCGGA
GAGGCTACTGGTGATGGAGCGTTTTAAGGGGGTTCCTCTCACGGATTTGG
AGGGCATCAAACGGTGCAGCAATAATCCCGAGGCCACTCTCATCACAGCC
CTCAACACATGGAGCATGAGTGTCATGATGGCTGATTCCTTCCACGCGGA
TGTCCACGCGGGAAACTTGTTGGTACTGGAAGATGGGCGCGTGGGATTCA
TCGACTTCGGAATCGTGGGGCGAATCCCGCAAAGAGTGTGGGCCTCTCTT
CGCGACCTTAGGATGTCCACGCGGGAAACTTGTTGGTACTGGAAGATGGG
CGCGTGGGATTCATCGACTTCGGAATCGTGGGGCGAATCCCGCAAAGAGT
GTGGGCCTCTCTTCGCGACCTTAGCAACGGTTTTATTTCGAAGGACTATC
GTCTCATGGCGGCATCTCTGGTAAAGATGGGAGCTGCGGACGGGGAGGTG
AACGTGGGCGCATTCGCTTTTGACATCGAGCGCGTGGTGGAGCGTATAGG
GTCGATGGAGGCGAAGGTCGACACGACGGCCGTAATTGACGAGGGCACCG
GTCGCGTGTCATACGGCACTTCTGTCAATGTGGATCAAGAGGTGGGTAGT
TGGCTCGTGCTCCAACGGTTTTATTTCGAAGGACTATCGTCTCATGGCGG
CATCTCTGGTAAAGATGGGAGCTGCGGACGGGGAGGTGAACGTGGGCGCA
TTCGCTTTTGACATCGAGCGCGTGGTGGAGCGTATAGGGTCGATGGAGGC
GAAGGTCGACACGACGGCCGTAATTGACGAGGGCACCGGTCGCGTGTCAT
ACGGCACTTCTGTCAATGTGGATCAAGAGGTGGGTAGTTGGCTCGTGCTC
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