mRNA_H-paniculata_contig11501.970.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A6H5KTF5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF5_9PHAE) HSP 1 Score: 389 bits (999), Expect = 7.780e-130 Identity = 201/254 (79.13%), Postives = 224/254 (88.19%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750 +VRKPGVEGTLQADLGFLYI SRLLE+LQPELGRTSF+AI SD+RTAMLDELDFRKEA NI FT FL RAGI +AV Y+ LSS+RLLVMER KGV LTDL+GIK S+NPEATLITALNTWSMSVMMA+SFHADVHAGNLLVLEDGRVGFIDFGIVGRIP+ VW+SLRDLSNGFI+ +YRLMA SLVKMGAADGEV+ AFAFDIE+V++ +GSMEA+VDT+ VIDE TG VSYGTSVN DQE + L+L Sbjct: 302 KVRKPGVEGTLQADLGFLYIASRLLEILQPELGRTSFAAIASDIRTAMLDELDFRKEAKNIEDFTGFLGRAGILDAVAPKVYEDLSSKRLLVMERLKGVALTDLDGIKDYSSNPEATLITALNTWSMSVMMAESFHADVHAGNLLVLEDGRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSTVIDEDTGNVSYGTSVNFDQESITRLLL 555
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: D8LPN0_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN0_ECTSI) HSP 1 Score: 364 bits (935), Expect = 1.760e-124 Identity = 193/253 (76.28%), Postives = 214/253 (84.58%), Query Frame = 1 Query: 4 VRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750 VRKPGVEGTLQADLGFLYI SRLLE+LQPELGRTSF+AI SD+RTAMLDELDFRKEA NI FT FLDRAGI +AV Y+ LSS+RLLVMER KGV LTDLEGIK S+NPEATLITALNTWSMSVMMA+SFHAD GRVGFIDFGIVGRIP+ VW+SLRDLSNGFI+ +YRLMA SLVKMGAADGEV+ AFAFDIE+V++ +GSMEA+VDT+AVIDE TG VSYGTSVN DQE + L+L Sbjct: 2 VRKPGVEGTLQADLGFLYIASRLLEILQPELGRTSFAAIASDIRTAMLDELDFRKEAKNIEDFTGFLDRAGILDAVAPKVYEDLSSKRLLVMERLKGVALTDLEGIKDYSSNPEATLITALNTWSMSVMMAESFHAD-----------GRVGFIDFGIVGRIPETVWSSLRDLSNGFITNNYRLMATSLVKMGAADGEVDTDAFAFDIEKVIDSLGSMEAQVDTSAVIDEDTGNVSYGTSVNFDQESITRLLL 243
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A835YPW4_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW4_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.360e-99 Identity = 158/247 (63.97%), Postives = 188/247 (76.11%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQE 729 +V+KPG EG LQADLGFL+I SR++E+LQPEL RTSFS IV D+R +MLDELDF KEA NI F FL A +T+A VY LS+ R+L MER KGVPLTD+EGI+R S NPEATLI ALNTWS+SVMM +SFHADVHAGNLLVLEDGRVGFIDFGIVGRIP+RVW ++RDLS G ++ DYR MA +LV+MGA DG V++ AFA DIE + R+ M+ V + D TGRV S+N QE Sbjct: 218 KVQKPGAEGVLQADLGFLFIASRVVELLQPELARTSFSNIVGDIRASMLDELDFGKEADNIDEFLQFLSDADVTQATAPRVYRSLSTRRVLTMERLKGVPLTDIEGIRRYSANPEATLINALNTWSLSVMMCNSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPKRVWGAVRDLSAGVVAGDYRAMALALVQMGATDGVVDIDAFALDIEGIFLRLARMDRDVQVAPMADPVTGRVGVAASLNFQQE 464
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A6T5M278_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M278_HETAK) HSP 1 Score: 260 bits (665), Expect = 2.960e-81 Identity = 138/255 (54.12%), Postives = 180/255 (70.59%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA-----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750 +V+KPGV L+ADLGFLY+ SR+LE+L PELGR + + I D+RT+MLDELDF KEA NIA F DFL R G+T VY +LS R+L MERF GVPLTDL+ I+R S+ PE TLI ALNTW+ SV++ D+FHADVHAGNLLVL+DGRVGFIDFGIVGRIP ++W S+ L+ F+ DYR MA ++V MGAA+ EV+V F D++++ E++ ++D ++ G G + V DQ + LVL Sbjct: 179 KVQKPGVADILKADLGFLYVTSRVLELLSPELGRVALADIAGDIRTSMLDELDFTKEAANIAEFRDFLVREGLTGVAAAPRVYPELSGRRVLCMERFDGVPLTDLDNIRRYSSQPEKTLIDALNTWTASVLLCDTFHADVHAGNLLVLQDGRVGFIDFGIVGRIPPKIWNSITKLAECFVGGDYRGMAEAMVAMGAAEREVDVARFGRDLQQLGEQL----LQLDPELMVAGGPG--GFEAQVQFDQNRVTELVL 427
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A4D9CYJ6_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYJ6_9STRA) HSP 1 Score: 244 bits (623), Expect = 2.370e-74 Identity = 124/254 (48.82%), Postives = 178/254 (70.08%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750 +V KPGV TL+ADLGF+Y+ SRL+E L P+L RTS IV+D+R+++L+E+DF KE N+ F FLD+AG+T A VY +LS+ ++L MER +GV L DLEGI+ +++PE LITALNTWS+SV++ SFHADVH+GNLLVLEDGRVGFIDFGIVGR+ W ++ ++ GF+ +DY+ +A L++MGA V+ A D+E + ER+ +++ +V A ++ T SV VD++ + L+L Sbjct: 199 KVLKPGVTDTLKADLGFIYLASRLIETLAPDLARTSLGDIVADIRSSILEEVDFSKEQANLEEFRMFLDQAGVTAATCPKVYPELSTRKVLTMERLRGVSLIDLEGIRAYTDDPEGALITALNTWSLSVVLCPSFHADVHSGNLLVLEDGRVGFIDFGIVGRLSPETWRAVTEVGEGFVGQDYQQIAQGLIRMGATAAAVDEEKLAADLEALFERVRTLDPQVVVVADMEAQTA----AASVAVDEDQVTRLLL 448
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A813CAD1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CAD1_9DINO) HSP 1 Score: 237 bits (604), Expect = 2.480e-73 Identity = 123/247 (49.80%), Postives = 168/247 (68.02%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV-----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQ 726 +V+KPGV+ LQADLGFL++ +R LE L PEL RTS I+S++R++MLDELDF KE N+ +F FL + G+ + + S +++L ME F GVPLTDLEGI++ S+NPE TLI ALN WS+SV + FHADVHAGNLLVLEDGRVGFIDFGIVGRIP ++W+++ + F + D MA +L+ MGA D V+ A A D++ V+ RI ++ +V + +G GRV ++ DQ Sbjct: 68 KVQKPGVQQVLQADLGFLFLAARTLEFLSPELARTSVVDILSEIRSSMLDELDFTKEMDNLETFRSFLQQNGLERIAAAPRTFPEASGKKVLTMELFSGVPLTDLEGIRQYSSNPEQTLINALNVWSLSVRACEIFHADVHAGNLLVLEDGRVGFIDFGIVGRIPPKIWSAVEGFALSFAANDAAGMAKNLIAMGATDRFVDESALASDVQNVLSRIAGLQPEV---VLRGKGDGRVVAEVGLDNDQ 311
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A8J6CCQ0_DIALT (ABC1 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCQ0_DIALT) HSP 1 Score: 241 bits (615), Expect = 2.760e-73 Identity = 132/255 (51.76%), Postives = 167/255 (65.49%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV-----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQEVGSWLVL 750 +V+KPG LQADLGFL + SR+LE + P LGR S + IVSD+RT ML ELDFR+EA N+ F FL AG+T+ Y S R+L MER GVPLTDL+GI+ S NPE TLI ALNTWS+SV+ + FHADVHAGNLLVL DGRVGFIDFGIVGRIP + W++++ L G + D+ L+A S+V MGA G VNV A DIE + + +++ ++ T + EG R V VD E + L L Sbjct: 219 KVQKPGTRDVLQADLGFLAVASRVLEFVAPSLGRLSLAGIVSDLRTTMLGELDFRQEAKNLGEFATFLRTAGLTDVSTCPRPYPAASGARVLTMERLYGVPLTDLDGIRAYSPNPEQTLINALNTWSLSVVASPFFHADVHAGNLLVLRDGRVGFIDFGIVGRIPPQTWSAVQGLGTGLVQSDWTLVAESMVAMGATSGAVNVQQLARDIEALALKAQTIDPQLSATVL--EGQVRAQ----VTVDSEAVTRLTL 467
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A812XC71_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XC71_9DINO) HSP 1 Score: 242 bits (617), Expect = 3.380e-73 Identity = 125/247 (50.61%), Postives = 170/247 (68.83%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGI-----TEAVYDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQ 726 +V+KPGVE LQADLGFL++ +R LE L P+L RTS I+S++R++MLDELDF KE N+ +F FL + G+ + + S +++L ME F+GVPLTDL+GI++ S+NPE TLI ALN WS+SV + FHADVHAGNLLVLEDGRVGFIDFGIVGRIP R+W ++ L+ F D + MA +L+ MGA D VN A A D+++V+ RI ++ +V + +G GRV ++ DQ Sbjct: 254 KVQKPGVEQVLQADLGFLFLAARTLEFLSPDLARTSVVDILSEIRSSMLDELDFTKEMENLETFRSFLQQKGLEPIAAAPRTFPEASGKKVLTMELFQGVPLTDLQGIRQYSSNPEETLINALNVWSLSVRACEIFHADVHAGNLLVLEDGRVGFIDFGIVGRIPPRIWDAVEGLAFSFAGNDAKGMAKNLIAMGATDSFVNESALASDVQKVLSRIAGLQPEV---VLRGKGDGRVVAEVGLDNDQ 497
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A096P9Y7_OSTTA (Protein kinase-like domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P9Y7_OSTTA) HSP 1 Score: 238 bits (606), Expect = 7.450e-72 Identity = 125/249 (50.20%), Postives = 172/249 (69.08%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEA-----VYDQLSSERLLVMERFKGVPLTDLEGIKRCSN-NPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQE 729 +V KP VE TL+ADL F+ I S++L+ L PEL RTS IV D+R +ML+E DFRKEA N+A+F +L+ AG+T+ VYDQ S++R++VME F GVPLTDLE I+ + +PE TL+ ALN W SV+ A+SFHADVHAGNL+V EDGRVGFIDFGIVGRI +W +++ ++DYR MA +LV MGA DG+V++ FA D+ RV + + S+E V ++++ + +V VDQ+ Sbjct: 220 KVLKPNVEDTLKADLSFVLIVSKVLQFLNPELSRTSLVDIVGDIRESMLEETDFRKEAANVAAFRRYLEDAGLTDIAKAPYVYDQFSNKRVMVMEYFSGVPLTDLEAIRSVTTRDPEQTLVNALNVWFGSVLAAESFHADVHAGNLIVCEDGRVGFIDFGIVGRISPSIWGAVQAFFQSTAARDYRRMALALVTMGATDGDVDIDKFAADLRRVYKTLDSIEPSV----IVEQDDYTGAQRAAVAVDQQ 464
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Match: A0A7S2RT86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT86_9STRA) HSP 1 Score: 239 bits (609), Expect = 8.110e-72 Identity = 127/247 (51.42%), Postives = 166/247 (67.21%), Query Frame = 1 Query: 1 QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDELDFRKEAGNIASFTDFLDRAGITEAV-----YDQLSSERLLVMERFKGVPLTDLEGIKRCSNNPEATLITALNTWSMSVMMADSFHADVHAGNLLVLEDGRVGFIDFGIVGRIPQRVWASLRDLSNGFISKDYRLMAASLVKMGAADGEVNVGAFAFDIERVVERIGSMEAKVDTTAVIDEGTGRVSYGTSVNVDQ 726 +V+KPGV TLQADLGFL + + +E L P+L R S + +V+D+R ML ELDFR E + F FL+ G+ + Y Q SS+++L MER GVPL DLEGI++ S+NPE TLI ALNTW++SV+ FHADVHAGNLLVLEDGRVGFIDFGIVGRIP ++W +L+D++ G +D+ +A LV MGA D EV++ AFA D+ RVVE I + +V V D G V+ G V+ Q Sbjct: 275 KVQKPGVAETLQADLGFLAVAGKAIEFLAPDLRRLSLANVVADLRELMLGELDFRAEGQCLGEFRQFLEENGLEDVATAPCYYPQASSKKVLTMERLYGVPLVDLEGIRKYSSNPEQTLINALNTWTLSVIACPFFHADVHAGNLLVLEDGRVGFIDFGIVGRIPSKIWGALQDVAVGAAGEDWVQVAQGLVAMGATDQEVDIQAFAEDLRRVVEAINEINPQV---VVQDNMDGTVAAGIGVDEQQ 518 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11501.970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11501.970.1 >prot_H-paniculata_contig11501.970.1 ID=prot_H-paniculata_contig11501.970.1|Name=mRNA_H-paniculata_contig11501.970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp QVRKPGVEGTLQADLGFLYIGSRLLEVLQPELGRTSFSAIVSDVRTAMLDback to top mRNA from alignment at H-paniculata_contig11501:1548..6061- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11501.970.1 ID=mRNA_H-paniculata_contig11501.970.1|Name=mRNA_H-paniculata_contig11501.970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4514bp|location=Sequence derived from alignment at H-paniculata_contig11501:1548..6061- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11501:1548..6061- >mRNA_H-paniculata_contig11501.970.1 ID=mRNA_H-paniculata_contig11501.970.1|Name=mRNA_H-paniculata_contig11501.970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at H-paniculata_contig11501:1548..6061- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |