mRNA_H-paniculata_contig11475.958.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A6H5KVF1_9PHAE (Magnesium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVF1_9PHAE) HSP 1 Score: 172 bits (436), Expect = 9.150e-49 Identity = 88/100 (88.00%), Postives = 91/100 (91.00%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCRRLKLL 486 VELLASDV + QNEVRNTEEIVEIELDVLRNNILRFELLLSIS FTV+LGALVTGVFGMNLLSGWEEKP FW VTGGIYGCI+L IAGTV LCRRL LL Sbjct: 359 VELLASDVNELQNEVRNTEEIVEIELDVLRNNILRFELLLSISGFTVALGALVTGVFGMNLLSGWEEKPQAFWQVTGGIYGCILLFIAGTVTLCRRLSLL 458
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A835ZID1_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID1_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.920e-31 Identity = 65/100 (65.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCRRLKLL 486 VEL++SD++D QNE+ NTEEIV+IELDV+RN IL+ ELLLSISAF V+LGAL TG+FGMNL S EE P FWVVTG I+ I SIA T C+R LL Sbjct: 181 VELISSDIKDDQNEITNTEEIVDIELDVIRNRILQVELLLSISAFMVALGALWTGIFGMNLKSHLEEHPHMFWVVTGAIFAWIFTSIATTRWFCKRAGLL 280
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A7S2UYK5_9STRA (Magnesium transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.780e-19 Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCR 471 VE +A DV+++Q ++N EE +E+ELDV+RN +LR EL+LS+ + V+ GAL TG+FGMNLLS E F+VV+ I+G + +++ V CR Sbjct: 97 VEFVAHDVQEYQKSIKNIEEGIELELDVVRNTMLRMELMLSVGSIVVACGALFTGLFGMNLLSHLENNASMFYVVSLFIFGGMAFALSKVVMYCR 191
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A7S1BTQ4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTQ4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.350e-19 Identity = 40/79 (50.63%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGI 423 ++ + + V+D QN+V NTEE+VEIELD++RN I+R ELLL +SA + GA +TG+FG+NL+S E P FW++T I Sbjct: 35 IDEIHATVQDVQNQVTNTEEVVEIELDLMRNRIMRTELLLEMSALVIGAGAAITGLFGLNLISHVELHPTMFWIITASI 113
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A4D9D8F3_9STRA (Magnesium transporter n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F3_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.210e-18 Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVT--GGIYGCIVLSIA 450 +E +++R+ Q+ +RNTE+ VEI+LD+LRN ILRFEL+L+I VS+G LVTG+FGMNLLSG E P F++VT GG+ +L++A Sbjct: 519 LEWADTEIREVQHAIRNTEDTVEIQLDLLRNRILRFELVLNIVTSVVSVGCLVTGLFGMNLLSGLEAHPSAFYIVTVAGGVTMAAILALA 608
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A482SVM6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVM6_9ARCH) HSP 1 Score: 88.2 bits (217), Expect = 2.200e-17 Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCRRLKLL 486 +E +A++V D +EVRNTEE V+++LD+LRN IL+FEL LSI F S GALVTG+FGMNLL+ +E + F+ VT I + G + +R KLL Sbjct: 367 IEWIAAEVDDILDEVRNTEENVDLQLDLLRNRILKFELKLSIITFLTSCGALVTGLFGMNLLNHFERSGVVFYAVTAMIIFGMFSGFRGFLRYAKRDKLL 466
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: M1VGU3_CYAM1 (Magnesium transporter n=2 Tax=cellular organisms TaxID=131567 RepID=M1VGU3_CYAM1) HSP 1 Score: 81.3 bits (199), Expect = 6.220e-15 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCRRLKLL 486 ++ L S++ +++TE+ V+I+LD LRN ILR +L+L + + ++S GALV +FGMNL S EE L F VTGG+ G L G A CR +LL Sbjct: 374 IDSLVSEIASRTQAIQSTEDFVQIKLDALRNRILRLDLVLKLGSVSLSSGALVAAIFGMNLHSTLEESQLAFLSVTGGLVGISGLVFLGGAAYCRYKRLL 473
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A7J7IG99_9RHOD (Magnesium transporter n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG99_9RHOD) HSP 1 Score: 80.5 bits (197), Expect = 1.160e-14 Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCRRLKLL 486 V+ + S++ + +++TE+ V+I+LD LRN ILR +L+L + + ++S GALV +FGMNL S EE L F +TGG+ G L G A CR +LL Sbjct: 375 VDSMVSEILSRAHAIQSTEDFVQIKLDALRNRILRLDLVLKLGSVSLSSGALVAAIFGMNLHSTLEESELAFLSITGGLVGLSGLVFLGGAAYCRYKRLL 474
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A2V3IKQ0_9FLOR (Magnesium transporter n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKQ0_9FLOR) HSP 1 Score: 79.0 bits (193), Expect = 2.390e-14 Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 187 VELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVVTGGIYGCIVLSIAGTVALCRRLKL 483 ++ + S+V V+ TE +I LD +RN +LR ++ L++ A +V +G LV GVFGMNLLSG EE P FW+V+G + ++ G +A R ++ Sbjct: 240 IDTVHSEVTSALQAVKATENATQIRLDAMRNRVLRLDIFLNLGAVSVGVGGLVAGVFGMNLLSGIEEDPAAFWIVSGISFLTSIMFFRGILAFLRMRRI 338
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Match: A0A7S4QC72_9STRA (Magnesium transporter n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC72_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 7.720e-14 Identity = 40/74 (54.05%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 190 ELLASDVRDFQNEVRNTEEIVEIELDVLRNNILRFELLLSISAFTVSLGALVTGVFGMNLLSGWEEKPLRFWVV 411 E+L S +R Q+ VRNTEE+VEIELD++RN I+R+E+LL +S V + A VTG FGMNL++ +EE P F+ V Sbjct: 405 EMLHS-LRSVQSSVRNTEEVVEIELDLIRNRIMRYEMLLELSGLVVGVAAAVTGAFGMNLVNHFEEHPHMFYNV 477 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11475.958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11475.958.1 >prot_H-paniculata_contig11475.958.1 ID=prot_H-paniculata_contig11475.958.1|Name=mRNA_H-paniculata_contig11475.958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp MTITGVQVHERRLVERRRHVPYVPHGGGDQRGSNAKPRPPSRDRDALRKLback to top mRNA from alignment at H-paniculata_contig11475:3550..7850- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11475.958.1 ID=mRNA_H-paniculata_contig11475.958.1|Name=mRNA_H-paniculata_contig11475.958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4301bp|location=Sequence derived from alignment at H-paniculata_contig11475:3550..7850- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11475:3550..7850- >mRNA_H-paniculata_contig11475.958.1 ID=mRNA_H-paniculata_contig11475.958.1|Name=mRNA_H-paniculata_contig11475.958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig11475:3550..7850- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |