mRNA_H-paniculata_contig11432.931.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A6H5KD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE) HSP 1 Score: 195 bits (495), Expect = 4.390e-54 Identity = 100/199 (50.25%), Postives = 133/199 (66.83%), Query Frame = 1 Query: 1 AVRYGLEKGEAQKILIINQRTRRWIGAVSPRSPIRQHASGSANMDNVDARRNSGVREAVAPTRNAPVLVVGQGRALVVVDTESGERVVLLNTMAPVTSVVVGGDGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQ---PSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLGATVE 588 AVRYGL KG ++ +++++++ RWIGA +PRSP+ A G + RR G T PVL+ GR ++ VD +G++ VL+ +APV S+VVGGDGE ++T H+DG M+QW L R+ AAF V G + + PSTDMHWH + VRCM +APDGVQL SGG E VLVQWNLSKGTKAF+PRLGA ++ Sbjct: 295 AVRYGLAKGISEAVILVSRQQYRWIGATAPRSPVPPAAEGGGDAK----RRGWG-------TTTCPVLLWKDGRDVMAVDVGTGDKAVLVTAVAPVRSLVVGGDGESLITAHLDGSMSQWHELTDRLRAAFKVLGSREVLSEAGPPSTDMHWHAHPVRCMAVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQ 482
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: D7G8M6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M6_ECTSI) HSP 1 Score: 186 bits (471), Expect = 2.120e-53 Identity = 95/200 (47.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 1 AVRYGLEKGEAQKILIINQRTRRWIGAVSPRSPIRQHASGSANMDNVDARRNSGVREAVAPTRNAPVLVVGQGRALVVVDTESGERVVLLNTMAPVTSVVVGGDGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQ---PSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLGATVEV 591 AVRYGL KG ++ +++++++ RWIG +PRSP+ + PVL+ GR ++ VD +G++ L+ +APV S+VVGGDGE +VTGH+DG M+QW L R+ AAF V G + PSTDMHWH + VRCM++APDGVQL SGG E VLVQWNLSKGTKAF+PRLGA ++V Sbjct: 254 AVRYGLAKGVSEAVILVSRQQYRWIGTTAPRSPVPAAXXXXXXXXXXXXXXXT----------TCPVLLWKDGRDVMAVDVGTGDKAALVTAVAPVRSLVVGGDGETLVTGHLDGSMSQWHELTDRLRAAFKVSGSREVFSEGGAPSTDMHWHAHPVRCMSVAPDGVQLFSGGEEAVLVQWNLSKGTKAFLPRLGAPLQV 443
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A250WQ96_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQ96_9CHLO) HSP 1 Score: 78.2 bits (191), Expect = 2.310e-13 Identity = 44/115 (38.26%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 268 LNTMAPVTSVVVGGDGEQVVTGHIDGRMTQWTRLYQRI-------GAAFGVPG-----FEGAMKQPSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLG 576 L+ P T V + D + G GR+ W + GAA G PG + ++ QP+T +HWH +AV C+ +PDG LLSGGRE VLV W + G + F+PRLG Sbjct: 180 LHHTKPYTCVAISADETMIAAGDASGRIQIWRNFAAHVPAVKRGEGAASG-PGSGKHHVDPSLLQPTT-VHWHSSAVGCLAFSPDGTYLLSGGRESVLVIWQVETGGQNFLPRLG 292
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A835W0N6_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835W0N6_9CHLO) HSP 1 Score: 77.8 bits (190), Expect = 3.120e-13 Identity = 38/106 (35.85%), Postives = 52/106 (49.06%), Query Frame = 1 Query: 268 LNTMAPVTSVVVGGDGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGF---EGAMKQPSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLG 576 L+ P T + + D + G GR+ W + + A++ P T +HWH + V C+T +PDG LLSGG EGVLVQW L F+PRLG Sbjct: 105 LHHTKPYTCLAISADDSLIAAGDASGRILIWRAFEHSVPSGLRSENSGKAHPAVQPPLTTLHWHAHPVGCLTFSPDGTYLLSGGSEGVLVQWALETNRPGFLPRLG 210
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A2K3DTS3_CHLRE (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DTS3_CHLRE) HSP 1 Score: 77.0 bits (188), Expect = 5.820e-13 Identity = 38/106 (35.85%), Postives = 52/106 (49.06%), Query Frame = 1 Query: 268 LNTMAPVTSVVVGGDGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGA---MKQPSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLG 576 L+ P T + + D + G GR+ W + + A ++ P T +HWH + V C+T +PDG LLSGG EGVLVQW L F+PRLG Sbjct: 172 LHHTRPYTCLAISADDSLIAAGDASGRILIWRAFEHSVPSGLRSENSGKAHPTVQPPLTTLHWHAHPVGCLTFSPDGTYLLSGGSEGVLVQWALETNRPGFLPRLG 277
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A317XWZ3_9BASI (Uncharacterized protein n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XWZ3_9BASI) HSP 1 Score: 77.0 bits (188), Expect = 6.000e-13 Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 310 DGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQ-PSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNL-SKGT-----KAFIPRLGATV 585 D ++VTG GR+ W L+ + + EG + PST MHWH +AV + +P+GV LLSGG EGVLV W+L S G K F+PRLGA + Sbjct: 332 DATRLVTGDSSGRIRVWYCLHDKFMSPSHADADEGMERHAPSTVMHWHAHAVSSLAFSPNGVNLLSGGEEGVLVVWHLGSSGAGAGAQKEFVPRLGAPI 430
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A4U7KYZ3_9BASI (Uncharacterized protein n=1 Tax=Sporisorium graminicola TaxID=280036 RepID=A0A4U7KYZ3_9BASI) HSP 1 Score: 73.9 bits (180), Expect = 6.900e-12 Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 310 DGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQ-PSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNL----SKGTKAFIPRLGA 579 D ++VTG GR+ W L A G +G + PST +HWH +AV + +P+GV LLSGG EGVLV W+L + ++ F+PRLGA Sbjct: 334 DSTRLVTGDATGRIRVWYCLQNSFMAPSKDEGDDGMERHAPSTVLHWHAHAVSSLCFSPNGVHLLSGGEEGVLVVWHLGASGNAASREFVPRLGA 428
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: A0A0D2USX4_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2USX4_CAPO3) HSP 1 Score: 68.6 bits (166), Expect = 4.980e-10 Identity = 40/116 (34.48%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 241 TESGERVVLLNTMAPVTSVVVGGDGEQVVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQPSTD-MHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLGATV 585 TE+G + +T V + + TG G + W + + +GA + P+T MHWH NAV M + DGV L+SGG E VLV W L G + ++PRLGA + Sbjct: 473 TETGHK---FKHARDLTCVAIHPTEAYIATGDSRGEIVLWYLQSESMQQ-------QGASRTPATSVMHWHANAVAHMCFSSDGVYLISGGLESVLVMWQLQTGHRQYLPRLGAAI 578
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: UPI0018654B16 (WD repeat-containing protein 75 n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018654B16) HSP 1 Score: 67.0 bits (162), Expect = 1.600e-9 Identity = 32/89 (35.96%), Postives = 44/89 (49.44%), Query Frame = 1 Query: 322 VVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQPSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKAFIPRLGATVE 588 + TGH DG++ W Q+ + HWH +AV ++ P+G+ LLSGG E VLV W TK +PRLGA +E Sbjct: 220 IATGHEDGKIRLWRNFNQKKEYTYST-------------QHWHHDAVSALSFTPEGMNLLSGGIESVLVLWRYGAETKDLLPRLGAAIE 295
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Match: H3AWK8_LATCH (Uncharacterized protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AWK8_LATCH) HSP 1 Score: 66.6 bits (161), Expect = 2.160e-9 Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 1 Query: 322 VVTGHIDGRMTQWTRLYQRIGAAFGVPGFEGAMKQPSTDMHWHDNAVRCMTIAPDGVQLLSGGREGVLVQWNLSKGTKA-FIPRLGATVE 588 + TGH DG++ W F + HWH +AV + + +G LLSGGRE VLVQW+ TK F+PRLGAT+E Sbjct: 221 IATGHKDGKIRLWR-------------SFNHKKEYTYASFHWHHDAVNDLIFSTEGTNLLSGGRESVLVQWHYGAETKKDFLPRLGATIE 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11432.931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11432.931.1 >prot_H-paniculata_contig11432.931.1 ID=prot_H-paniculata_contig11432.931.1|Name=mRNA_H-paniculata_contig11432.931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp AVRYGLEKGEAQKILIINQRTRRWIGAVSPRSPIRQHASGSANMDNVDARback to top mRNA from alignment at H-paniculata_contig11432:284..2620+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11432.931.1 ID=mRNA_H-paniculata_contig11432.931.1|Name=mRNA_H-paniculata_contig11432.931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2337bp|location=Sequence derived from alignment at H-paniculata_contig11432:284..2620+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11432:284..2620+ >mRNA_H-paniculata_contig11432.931.1 ID=mRNA_H-paniculata_contig11432.931.1|Name=mRNA_H-paniculata_contig11432.931.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig11432:284..2620+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |