mRNA_H-paniculata_contig34832.9289.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig34832.9289.1
Unique NamemRNA_H-paniculata_contig34832.9289.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 198 bits (503), Expect = 2.060e-52
Identity = 142/398 (35.68%), Postives = 201/398 (50.50%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPP-SVPLSLETYRLYAACVKAC-------------TASSRAAETGITL-------------------------LTI-----FLLGLP--------------LSRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAE-GKVKI-----SAPDRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFG--CRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIRE 1163
            T APVA++S++RT+ +LAA + +EL  M+V +AYLN  +++E++++ PP S P  LE       C+K               T S+R AE G T                          LTI     F++                 +  +LG EV+ DR   TI ISQ +YI  V  R+  +    V  P + G V       S P +    S+   R  +GS++YA  G RPDIA+AV  +++  ++P R  +   KR+ RY     +L + +G   +G  ++GF DADW    E R S +GYVF L+GGAI W S+KQ  V  SSTEAEY+A   A K+ ++L  LL  I      R   TLF DN+SAI L+K +  H RTKHI +R+H IRE
Sbjct: 1047 TFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLEHL---VCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYKRAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSDDG--IQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHAAKEALWLRYLLSDIIHPDISRYPLTLFSDNRSAIALAKDNAFHPRTKHIDIRFHFIRE 1439          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 184 bits (468), Expect = 6.260e-52
Identity = 97/243 (39.92%), Postives = 145/243 (59.67%), Query Frame = 3
Query:  438 LSRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAE-GKVKISAPDRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIRE 1163
            +  VLG  +R DR  G +TISQ +Y++ +LKR+G ++C+ V  P E GK     PD     +++E + +IG + Y +T  RPD+A AV  +++    P +E +   KR+ RY  +  + G+ F G+S    L G+ DADW  D++ R+S +GYVF++NG  + WCS++Q  VT S+TEAEYVA   A ++ V+L  LL  I       + +  DN+ AI LSK    H RTKHI V +H +RE
Sbjct:   21 VKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVRE 263          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 196 bits (499), Expect = 6.970e-52
Identity = 127/399 (31.83%), Postives = 201/399 (50.38%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPPSVP------------------LSLETYRLYAACVKACTAS----------SRAAETGITLLTIFL-------------------LGLPLSR--------VLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPA---EGKVKISAPDRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGE---SNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTV----YLGELLGLIRFGCRGS--TTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIRE 1163
            T APV + +++R + + AA+H  E++ MDV +A+LN  +E+E+F++ PP                      S E Y+   A  ++   S           R  +  +T++ +++                   LG+P           +LG E+ HDR+  TIT+SQ  Y+  +LK +G   CR V  P    +  +K++ P+       S     +GS++YA  G RPD+A+AV  +++    P ++ ++   R+++Y     D  + F G    S G  L G+ +ADW  DV DR+S TG++FKL   AI W S+KQ  V  S+TEAEY+A   A K+ +    +L EL G+  F   GS  T +  DN+SA++L+K S  H RTKHI +R H IR+
Sbjct: 1047 TFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLYGLKQASREWYKKVRALFESLGYSRSNADHSVFYKRGKDGDLTVVAVYVDDMLIFAKDRAAVDHIKLELGVPYEMSDLGEARWILGMEIIHDRARKTITLSQHQYVENILKTHGMANCRPVSTPMAPNQKLLKLNVPEVDERAYQSA----LGSLMYAMLGTRPDLAFAVGMLSKHAASPGKDHWTALMRVYKYLRGTSDHALVFDGSALCSEGGNLVGYSNADWAGDVNDRRSVTGFIFKLGDAAISWQSKKQDCVALSTTEAEYIALAAASKEALWLRTFLSELYGMT-FDAPGSPGTLILVDNQSAMSLAKNSTFHDRTKHIAIRHHFIRD 1440          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 190 bits (482), Expect = 1.400e-51
Identity = 130/395 (32.91%), Postives = 199/395 (50.38%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPPSVP----------LSLETYRLYAA----CVKACTAS-----SRAA-------------ETGITLLTIFLLGLPLSRV-------------------------LGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKI------SAPDRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIRE 1163
            T APVA++S++R + +LAA   +EL+ MDV  AYLN  +E+E+F+K PP  P          L    Y L  A      K C A      +R++             E  I  +++  L +  + V                         LG E++ DR   TI++ Q +YI  +L R+   + + +    +    +      S P +     +   R  IGS++YA+ G RPD++YAV  +++  ++P    +   KR+ RY     +  +T+GG+ N +G+EGF DADW    + R+S +GYVF ++GGA+ W S+KQ  V  SSTEAEYVA   A K+ ++    LG I       TTL+ DN+SAI L+K +  H RTKHI +R+H IR+
Sbjct:  113 TFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGD-NANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRD 505          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 192 bits (489), Expect = 1.460e-50
Identity = 133/388 (34.28%), Postives = 191/388 (49.23%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPPSVP--------LSLETYRLYAAC----------VKACTASSRAAETGI---------TLLTIFL----LGLP-------------LSRV------------LGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKISAPDRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIRE 1163
            T APV + ++LRT+ +L A+H  EL+ MDV  AYLN  +E+E++++ PP           L    Y L  A            +    S   A+ G+         TLL I +    +G               LS++            LG EV  DR+   +T+SQ  YI +VL+R+GF + R +  P     K+          + + +  +GS++YA  G RPDIAYAV  +++ +  P  E ++   R F+Y     D  + + G+     L G+VD+DW  D  DR+S +GYVF L G AI W S+KQQ V  SSTEAEY+AA  A K+ V+L  LL  +R      T L  DN+ AI L+K    H  TKHI VR H +R+
Sbjct:  978 TFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPGFRGDGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEI-DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRD 1364          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY)

HSP 1 Score: 192 bits (487), Expect = 2.740e-50
Identity = 127/394 (32.23%), Postives = 203/394 (51.52%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPP--------SVPLSLET------------YRLYAACVKACTASSRAAETGI---------TLLTIFL----------------------------LGLPLSRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKISAPDRGRSG------SSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIR 1160
            T APVAR+S++RT+F++A+ +G+ ++  D  +A+LN+ ++++++++ PP           L L+             Y    A +         A+ GI          +L + +                            LG P+S VLG +V  D    T+++SQ SYI  ++ R+ FD+ + +  P +  +++S      S            R  IG+++YA+ G RPDIA+AV  +A+ +E+P    +   KR+FRY      L + +GG  +G  LEGFVDAD     E R++ TGYVF ++GGA+ W S+KQ+ VT S+ E+EYVAA  A K+ ++L   +G +       TTL GDN++AI L+K    H RTKHI +R+H IR
Sbjct: 1095 TFAPVARLSSIRTIFAIASRNGWPIDVFDFSSAFLNSTLDEDVYLEQPPHHEFADRGKFVLKLKKALYGLKQGGRKWYETLCAALADLGFGRVEADHGIFFKREDGHLVVLAVHVDDCIITGDSGSLNNSYKTQLSTRYKLTDLG-PVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTHWEAVKRVFRYLVGTRHLSLVYGGGKDG--LEGFVDADGSSQ-EHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRFIGEVFQPLSEPTTLHGDNQAAIALTKDGSYHARTKHIDIRYHFIR 1484          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A409WUQ4_9AGAR (Uncharacterized protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WUQ4_9AGAR)

HSP 1 Score: 191 bits (486), Expect = 3.740e-50
Identity = 129/397 (32.49%), Postives = 203/397 (51.13%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVE--QELFVKLPPSVPLSLETYRLYAACVKACTASSRAAE----------------------------TGITLLTIFL-------------------------LGLP----LSRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKISAPDRGRSGSSSEC------RGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCR-GSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIR 1160
            T APVAR+S++R V ++AA   +E++ +D+  AYLN  +   ++++++ PP   +  +  R+    VK      ++                               G +++ I +                         +G+     L  +LG EV  +RS  T+ +SQ SYI  +++RYGF++ + V +P +  V++S     ++            R  IGS++YA+ G RPDIAYAV  V+R + +P    +   KRIFRY     DL +++G   +   L GF DAD     EDR + TGY F +NGGA+ W +++Q+ ++ S+TE+EYVAA  A K+ ++L  LL  I FG +  + TLF DN+SAI LSK    H RTKHI +R+H IR
Sbjct: 1123 TFAPVARLSSIRAVLAIAAHRNWEIHQIDIIGAYLNGELANYEKIYMRQPPGYTMKGKE-RMVCRLVKTLYGLKQSGRRWYQKLVEIMGKLGFKRSDVDQAVFYRRNGNSIIIILVHVDDCTIVASVLSLIERFKIEIRKHVGITDMGELHWILGIEVTRNRSLRTLHLSQRSYIHSIIRRYGFEDSKPVSMPMDPNVRLSTTQSPQTTQQYAAMRNIPYREAIGSLMYAALGTRPDIAYAVQAVSRFSTNPGTTHWEAVKRIFRYLKGTKDLWLSYGSRRDDGTLVGFTDADGSM-AEDRHAITGYAFIINGGAVSWSAKRQEIISLSTTESEYVAATHAAKEALWLRSLLDQI-FGTKLDAITLFSDNQSAIALSKDHQYHARTKHIDIRFHFIR 1516          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 184 bits (466), Expect = 5.470e-50
Identity = 127/394 (32.23%), Postives = 202/394 (51.27%), Query Frame = 3
Query:  174 APVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQE--LFVKLPPS----------VPLSLETYRLYAA--------CVKACTASSRAAET-----------GITLLTIFL-------LGLPL--------------------SRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKI-------SAPDRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIR 1160
            APVA++S++R + ++AA +G+++   D ++AYLN+ ++ +  ++++ PP           + L    Y L           C+         AE+            IT+L I +          PL                    S +LG +V  DR   T+++SQ +YI  +L R+ F + +   IP +  +++       S  D  R       R  IGS++YA+ G RPDI++A+  +A+ +++P    +   KR+FRY     +L + +GG   G  LEG+VDAD     E R + TGYVF ++GGA+ W S+KQ+ VT S+TEAEYVAA  A K+ +++  LLG +     G TTL+ D++SAI L+K    H RTKHI +R+H IR
Sbjct:   31 APVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARM-RKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQ-EHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDSQSAIALTKDGQYHARTKHIDIRYHFIR 420          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU)

HSP 1 Score: 183 bits (464), Expect = 6.690e-50
Identity = 124/395 (31.39%), Postives = 200/395 (50.63%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPPSVPLSLETYRLYAACVKAC------------TASSRAAETGIT------------------LLTIFL----------------------------LGLPLSRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKISAPDRGRSGSSSE------CRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIR 1160
            T APVA++++ R + ++AA +G+     D ++AYLN+ +++E++++ PP    + +  +     +KA             T S+  A+ G T                  +L I +                            LG P+S +LG +V  D S  T+ +SQ +YI  ++ R+ FD+ + +  P +   ++S      S +          +  IGS++YA+ G RPDIA+AV  +A+ +++P    +   KR+FRY      L + +GG   G  LEG+VDAD     E R++ TGYVF ++GGAI W S+KQ+ VT S+ E+EYVAA  A K+ ++L  L+G +       TTL  D++SAI L+     H RTKHI +R+H IR
Sbjct:    9 TFAPVAKLASFRLILAIAARNGWSAETFDFNSAYLNSKLDEEVYLEQPPDHEFA-DRRKYVLKLLKALYGLKQGGRKWYETLSAALADLGFTRAEADYGVFFKRDGTHLVILAIHVDDCLITGSSTRLLAEYKRQLAAKYKLTDLG-PVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRG--LEGYVDADGASQ-EHRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDSQSAIALTVDGSYHARTKHIDIRYHFIR 398          
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Match: A0A409X4K8_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409X4K8_9AGAR)

HSP 1 Score: 188 bits (477), Expect = 3.050e-49
Identity = 139/397 (35.01%), Postives = 200/397 (50.38%), Query Frame = 3
Query:  168 TSAPVARMSTLRTVFSLAAEHGFELNGMDVDAAYLNAPV---------EQELFVKLPPSV---PLSLETYRL-------YAACVKACTA---SSRAAETGI------------------TLLT-------------------IFLLGLPLSRVLGTEVRHDRSNGTITISQGSYIREVLKRYGFDECRGVPIPAEGKVKISAP-------DRGRSGSSSECRGMIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPDLGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRKQQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSAINLSKGSGAHCRTKHIGVRWHGIR 1160
            T APVAR+ST R V +LA  +G+ +  +D D+A+LNAP+         + + + K  P V    L    Y L       YAA  KA          A+ G+                   LLT                   I  LG P + +LG ++  D +  TI++SQ +YI  ++ R+ FD+ +   IP +   ++S         D+ R   +   R  +GS++YAS G RPDI +A   VA+  ++P    +   K+IFRY     +L + +GGE+    L GFVDAD     E R + +GYVF ++GGA+ W S+KQ+ VT S+TEAEYVAA  A K+ V+L  L+  I       TTL+GDN+SAI L+ G   H RTKHI +R+H IR
Sbjct:  461 TYAPVARLSTFRYVIALANRNGWPIESIDFDSAFLNAPLGDDEVIYLEQPKGYAKADPKVYVFRLEKSLYGLKQGARNWYAALRKALEELGFKRMEADHGVFVKNEGECLLILVVHVDDCLLTGNSMEKISKFKRDINQKYKITDLG-PCTWLLGIKLTRDLTQRTISLSQHAYIESIITRFNFDDLKPCAIPIDPNQQLSRSQCPTSLADKARM-KNVPYREAVGSLMYASMGTRPDITFATSTVAQFMDNPGWVHWEAVKKIFRYLKGTKELELVYGGETRD--LVGFVDADGASQ-EHRHAISGYVFIVDGGAVSWASKKQELVTLSTTEAEYVAATHAAKEAVWLRRLISEILSPISEPTTLYGDNQSAIALAHGGQYHARTKHIDIRYHFIR 852          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34832.9289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060S825_PYCCI2.060e-5235.68CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A7D9D5L2_PARCT6.260e-5239.92Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A060SSE0_PYCCI6.970e-5231.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9ZVS1_9AGAM1.400e-5132.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZJA2_9AGAM1.460e-5034.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A2G8SFR3_9APHY2.740e-5032.23Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A409WUQ4_9AGAR3.740e-5032.49Uncharacterized protein n=1 Tax=Panaeolus cyanesce... [more]
A0A4S4K468_9APHY5.470e-5032.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2VSW8_TRAPU6.690e-5031.39Retrovirus-related Pol polyprotein from transposon... [more]
A0A409X4K8_9AGAR3.050e-4935.01Integrase catalytic domain-containing protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34832contigH-paniculata_contig34832:499..1911 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score174.5
Seed ortholog evalue8.2e-41
Seed eggNOG ortholog7029.ACYPI067527-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38VJ1@33154,3CB3U@33208,3DT1J@33213,3EE1Z@33342,3SW1M@50557,4294G@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
Exons3
Model size1163
Cds size975
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34832.9289.1prot_H-paniculata_contig34832.9289.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig34832 687..1911 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930076.3281724-UTR-H-paniculata_contig34832:498..6861622930076.3281724-UTR-H-paniculata_contig34832:498..686Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig34832 499..686 +
1691481136.9738438-UTR-H-paniculata_contig34832:498..6861691481136.9738438-UTR-H-paniculata_contig34832:498..686Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig34832 499..686 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930076.3524709-CDS-H-paniculata_contig34832:686..9221622930076.3524709-CDS-H-paniculata_contig34832:686..922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34832 687..922 +
1691481136.9830246-CDS-H-paniculata_contig34832:686..9221691481136.9830246-CDS-H-paniculata_contig34832:686..922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34832 687..922 +
1622930076.37122-CDS-H-paniculata_contig34832:1094..12711622930076.37122-CDS-H-paniculata_contig34832:1094..1271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34832 1095..1271 +
1691481136.9911096-CDS-H-paniculata_contig34832:1094..12711691481136.9911096-CDS-H-paniculata_contig34832:1094..1271Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34832 1095..1271 +
1622930076.417228-CDS-H-paniculata_contig34832:1349..19111622930076.417228-CDS-H-paniculata_contig34832:1349..1911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34832 1350..1911 +
1691481136.9990025-CDS-H-paniculata_contig34832:1349..19111691481136.9990025-CDS-H-paniculata_contig34832:1349..1911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig34832 1350..1911 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig34832.9289.1

>prot_H-paniculata_contig34832.9289.1 ID=prot_H-paniculata_contig34832.9289.1|Name=mRNA_H-paniculata_contig34832.9289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
MSTLRTVFSLAAEHGFELNGMDVDAAYLNAPVEQELFVKLPPSVPLSLET
YRLYAACVKACTASSRAAETGITLLTIFLLGLPLSRVLGTEVRHDRSNGT
ITISQGSYIREVLKRYGFDECRGVPIPAEGKVKISAPDRGRSGSSSECRG
MIGSVLYASTGIRPDIAYAVHQVARRTEDPCREDFSTCKRIFRYPSNVPD
LGITFGGESNGHGLEGFVDADWVEDVEDRKSKTGYVFKLNGGAIRWCSRK
QQFVTWSSTEAEYVAAGEAGKDTVYLGELLGLIRFGCRGSTTLFGDNKSA
INLSKGSGAHCRTKHIGVRWHGIRE
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mRNA from alignment at H-paniculata_contig34832:499..1911+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig34832.9289.1 ID=mRNA_H-paniculata_contig34832.9289.1|Name=mRNA_H-paniculata_contig34832.9289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1413bp|location=Sequence derived from alignment at H-paniculata_contig34832:499..1911+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCGCACCCGCGTCGAGGATCTGGGGAGGTTACCGGCAGGGCGGAAGGC GATTCGTACGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGCAGCG TGGCACGCTGCAAAGCGCGACTGGTGGCTCAAGGTTTTTCACAGGTGGGG GGTGAAGATTTCTTTGAACCAGTGCCCCCGTAGCTCGCATGTCGACGTTA CGTACTGTTTTTAGCCTGGCCGCCGAACATGGTTTCGAATTAAACGGCAT GGACGTAGATGCGGCGTATTTGAACGCCCCAGTAGAACAAGAGCTGTTTG TTAAGCTACCCCCGAGTGTTCCCCTTTCTCTCGAGACATACCGTTTGTAC GCCGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGG AATAACACTTTTGACGATTTTCTTGTTGGGATAGAACTCGACCGTTCCAC TACCGATTCATGCTTGTACTTTTCGCGCGACGATGGGGGAGAGACAAACC TTCTGATGGCCGTGTATGTTCACCTGGTCATTGCTGGCCGTCGTGAGAAA GTGGATGAGTTCAAGCATAACATAAGTTAGTGTTTTAGGATGAAAGACTT GGGCTCCCTCTCTCGCGCGTGTTGGGAACAGAAGTACGACATGACCGCTC TAATGGTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACTAA AACGATACGGTTTTGACGAGTGTCGAGGAGTACCCATCCCTGCAGAGGGA AAAGTGAAGATTTCGGCACCCGAGTCGGCCGACAAGTTCTCCGAACAGAA GTCATTTGGAGCTGTACTATCGGACATAGGCGCAGGAGTACAAGAAAACA GCAGAGGGAGAAGTGGCAGTTCATCAGAATGCAGAGGCATGATAGGATCA GTCCTGTACGCCTCGACAGGAATTAGACCTGATATAGCATATGCGGTACA CCAAGTAGCACGTCGTACGGAGGACCCATGTCGGGAAGACTTCAGTACAT GCAAGCGCATTTTTCGTTATCCCAGTAATGTACCTGACCTCGGCATTACG TTCGGCGGTGAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGCCGA TTGGGTGGAAGATGTCGAGGACCGAAAGTCCAAAACAGGATACGTTTTCA AGCTGAACGGCGGTGCAATAAGGTGGTGCTCTAGGAAGCAACAGTTTGTC ACGTGGTCCAGTACAGAGGCAGAATACGTTGCTGCAGGAGAAGCGGGAAA GGATACGGTATATCTTGGGGAGTTACTAGGATTGATACGTTTCGGATGCA GGGGGAGCACGACATTGTTTGGGGACAATAAATCAGCTATTAATCTCAGT AAGGGATCTGGCGCACACTGCAGGACAAAGCACATCGGAGTGCGCTGGCA CGGAATTCGAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig34832:499..1911+

>mRNA_H-paniculata_contig34832.9289.1 ID=mRNA_H-paniculata_contig34832.9289.1|Name=mRNA_H-paniculata_contig34832.9289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig34832:499..1911+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGACGTTACGTACTGTTTTTAGCCTGGCCGCCGAACATGGTTTCGA
ATTAAACGGCATGGACGTAGATGCGGCGTATTTGAACGCCCCAGTAGAAC
AAGAGCTGTTTGTTAAGCTACCCCCGAGTGTTCCCCTTTCTCTCGAGACA
TACCGTTTGTACGCCGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGC
GGCCGAAACTGGAATAACACTTTTGACGATTTTCTTATGTCGACGTTACG
TACTGTTTTTAGCCTGGCCGCCGAACATGGTTTCGAATTAAACGGCATGG
ACGTAGATGCGGCGTATTTGAACGCCCCAGTAGAACAAGAGCTGTTTGTT
AAGCTACCCCCGAGTGTTCCCCTTTCTCTCGAGACATACCGTTTGTACGC
CGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAGCGGCCGAAACTGGAA
TAACACTTTTGACGATTTTCTTACTTGGGCTCCCTCTCTCGCGCGTGTTG
GGAACAGAAGTACGACATGACCGCTCTAATGGTACCATAACCATCTCGCA
GGGTAGCTACATCCGCGAGGTACTAAAACGATACGGTTTTGACGAGTGTC
GAGGAGTACCCATCCCTGCAGAGGGAAAAGTGAAGATTTCGGCACCCGAA
CTTGGGCTCCCTCTCTCGCGCGTGTTGGGAACAGAAGTACGACATGACCG
CTCTAATGGTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTAC
TAAAACGATACGGTTTTGACGAGTGTCGAGGAGTACCCATCCCTGCAGAG
GGAAAAGTGAAGATTTCGGCACCCGACAGAGGGAGAAGTGGCAGTTCATC
AGAATGCAGAGGCATGATAGGATCAGTCCTGTACGCCTCGACAGGAATTA
GACCTGATATAGCATATGCGGTACACCAAGTAGCACGTCGTACGGAGGAC
CCATGTCGGGAAGACTTCAGTACATGCAAGCGCATTTTTCGTTATCCCAG
TAATGTACCTGACCTCGGCATTACGTTCGGCGGTGAGAGTAATGGTCACG
GTCTGGAAGGATTCGTTGATGCCGATTGGGTGGAAGATGTCGAGGACCGA
AAGTCCAAAACAGGATACGTTTTCAAGCTGAACGGCGGTGCAATAAGGTG
GTGCTCTAGGAAGCAACAGTTTGTCACGTGGTCCAGTACAGAGGCAGAAT
ACGTTGCTGCAGGAGAAGCGGGAAAGGATACGGTATATCTTGGGGAGTTA
CTAGGATTGATACGTTTCGGATGCAGGGGGAGCACGACATTGTTTGGGGA
CAATAAATCAGCTATTAATCTCAGTAAGGGATCTGGCGCACACTGCAGGA
CAAAGCACATCGGAGTGCGCTGGCACGGAATTCGAGAGCAGAGGGAGAAG
TGGCAGTTCATCAGAATGCAGAGGCATGATAGGATCAGTCCTGTACGCCT
CGACAGGAATTAGACCTGATATAGCATATGCGGTACACCAAGTAGCACGT
CGTACGGAGGACCCATGTCGGGAAGACTTCAGTACATGCAAGCGCATTTT
TCGTTATCCCAGTAATGTACCTGACCTCGGCATTACGTTCGGCGGTGAGA
GTAATGGTCACGGTCTGGAAGGATTCGTTGATGCCGATTGGGTGGAAGAT
GTCGAGGACCGAAAGTCCAAAACAGGATACGTTTTCAAGCTGAACGGCGG
TGCAATAAGGTGGTGCTCTAGGAAGCAACAGTTTGTCACGTGGTCCAGTA
CAGAGGCAGAATACGTTGCTGCAGGAGAAGCGGGAAAGGATACGGTATAT
CTTGGGGAGTTACTAGGATTGATACGTTTCGGATGCAGGGGGAGCACGAC
ATTGTTTGGGGACAATAAATCAGCTATTAATCTCAGTAAGGGATCTGGCG
CACACTGCAGGACAAAGCACATCGGAGTGCGCTGGCACGGAATTCGAGAG
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