mRNA_H-paniculata_contig34789.9273.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: D8LIA5_ECTSI (Probable carboxypeptidase Cxp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA5_ECTSI) HSP 1 Score: 123 bits (309), Expect = 2.160e-31 Identity = 58/65 (89.23%), Postives = 61/65 (93.85%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVF S PFWKFAAPLVRARFPHT+GV+ +AFYRGLNRVAP LIRVDADEVTYPLHIILR
Sbjct: 420 SLLWERMVFQSRPFWKFAAPLVRARFPHTKGVSDEAFYRGLNRVAPSLIRVDADEVTYPLHIILR 484
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A836CFE7_9STRA (Putative carboxypeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE7_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.680e-24 Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVFL PFWKFA PL FPHT T++ FYR +N+V+PGLIRV+ADEVTYP+HIILR
Sbjct: 372 SLLWERMVFLGRPFWKFATPLFHEHFPHTAECTSEDFYRAVNKVSPGLIRVNADEVTYPMHIILR 436
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S0VY38_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VY38_9CRYP) HSP 1 Score: 99.4 bits (246), Expect = 2.770e-24 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMV SLPFWK+A P+V FPHT+ T + FYR +N V P LIRVDADEVTYPLH+ILR
Sbjct: 23 SLLWERMVGQSLPFWKWATPIVHKYFPHTKACTPEDFYRAVNHVRPSLIRVDADEVTYPLHVILR 87
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S4D9D9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9D9_HETAK) HSP 1 Score: 100 bits (250), Expect = 6.130e-24 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVFLS PFW +A P+ FPHT+ TAD FY +N+V PG IRVDADEVTYPLH++LR
Sbjct: 150 SLLWERMVFLSRPFWDYATPIFHKHFPHTKDCTADDFYAVMNQVEPGFIRVDADEVTYPLHVVLR 214
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S3XZ66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ66_HETAK) HSP 1 Score: 100 bits (250), Expect = 1.270e-23 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVFLS PFW +A P+ FPHT+ TAD FY +N+V PG IRVDADEVTYPLH++LR
Sbjct: 221 SLLWERMVFLSRPFWDYATPIFHKHFPHTKDCTADDFYAVMNQVEPGFIRVDADEVTYPLHVVLR 285
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S2U1I1_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2U1I1_9EUKA) HSP 1 Score: 100 bits (249), Expect = 2.350e-23 Identity = 43/65 (66.15%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVF PFW++A P++ FPHT+ V+A+ FY+ +NRV+ GLIRVDADE+TYPLHIILR
Sbjct: 262 SLLWERMVFQGRPFWEYATPIIHKHFPHTKDVSAEDFYKAVNRVSAGLIRVDADELTYPLHIILR 326
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: R1E666_EMIHU (Uncharacterized protein n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E666_EMIHU) HSP 1 Score: 97.8 bits (242), Expect = 2.800e-22 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMV S PFW+FAAPL ARFP T TA F+R NRV+PG IRV+ADEVTYPLH+ILR
Sbjct: 329 SLLWERMVLQSKPFWEFAAPLFHARFPFTAEATAADFFRTYNRVSPGCIRVEADEVTYPLHVILR 393
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S0DL71_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DL71_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 1.420e-21 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVF PFW +A P++ FPHT+ +TAD Y+ +N V PGLIR +ADE+TYPLHI+LR
Sbjct: 369 SLLWERMVFQGRPFWDYATPIIHKYFPHTKDITADELYKAVNHVQPGLIRTEADELTYPLHIMLR 433
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S1XPI5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPI5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.830e-21 Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVF S FWK+ AP V FPHTEG + + FY +NRV GLIRVDADE+TYPLHIILR
Sbjct: 324 SLLWERMVFQSRAFWKYMAPKVAKYFPHTEGTSPEDFYAYVNRVQAGLIRVDADELTYPLHIILR 388
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Match: A0A7S2KNN7_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KNN7_BIGNA) HSP 1 Score: 93.6 bits (231), Expect = 8.310e-21 Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 1 SLLWERMVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVTYPLHIILR 195
SLLWERMVF FW++A P++ FPHT+ V A FYR +NRV PGLIR +ADE+TYPLHI+LR
Sbjct: 294 SLLWERMVFQGKAFWQYATPIIHKYFPHTKDVDAMEFYRAVNRVQPGLIRTEADELTYPLHIMLR 358 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34789.9273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34789.9273.1 >prot_H-paniculata_contig34789.9273.1 ID=prot_H-paniculata_contig34789.9273.1|Name=mRNA_H-paniculata_contig34789.9273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp MVFLSLPFWKFAAPLVRARFPHTEGVTADAFYRGLNRVAPGLIRVDADEVback to top mRNA from alignment at H-paniculata_contig34789:602..799- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34789.9273.1 ID=mRNA_H-paniculata_contig34789.9273.1|Name=mRNA_H-paniculata_contig34789.9273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=198bp|location=Sequence derived from alignment at H-paniculata_contig34789:602..799- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34789:602..799- >mRNA_H-paniculata_contig34789.9273.1 ID=mRNA_H-paniculata_contig34789.9273.1|Name=mRNA_H-paniculata_contig34789.9273.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=360bp|location=Sequence derived from alignment at H-paniculata_contig34789:602..799- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |