mRNA_H-paniculata_contig34783.9272.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: D8LIA5_ECTSI (Probable carboxypeptidase Cxp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA5_ECTSI) HSP 1 Score: 234 bits (596), Expect = 2.990e-71 Identity = 112/145 (77.24%), Postives = 125/145 (86.21%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
RFEIEQGLMDGSI+V DVP VW KMK+LLGV+VPGDAEGCLQDIHW V GA GYFPSYTLGA+MACQF EAAK A+PDL+ SL DGNFEPLKTWLN+EVHARGSL+ SPDELL +VTGD MRP ALV+HL++KYT+IY L
Sbjct: 484 RFEIEQGLMDGSIAVKDVPSVWVSKMKELLGVDVPGDAEGCLQDIHWSV-----GAFGYFPSYTLGAVMACQFLEAAKLALPDLDSSLEDGNFEPLKTWLNREVHARGSLFASPDELLTEVTGDIMRPSALVEHLKSKYTEIYDL 623
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A6H5JYB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB6_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.210e-69 Identity = 110/174 (63.22%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEV-----------------------------HARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
RFEIEQGLMDGSI+V DVP VW+ KMK+LLGV+VPGDAEGCLQDIHW V GA GYFPSYTLGA+MACQF EAA+ A+PDL+ SL GNFEPLKTWLN+EV HARGSL+ SPDELL +VTGD MRP ALV+HL++KYT+IY L
Sbjct: 10 RFEIEQGLMDGSIAVKDVPSVWASKMKELLGVDVPGDAEGCLQDIHWSV-----GAFGYFPSYTLGAVMACQFLEAARLALPDLDSSLEAGNFEPLKTWLNREVGGQWLSKQKVIETPNNNEWPATIESLPQVHARGSLFASPDELLSEVTGDIMRPSALVEHLKSKYTEIYDL 178
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A836CFE7_9STRA (Putative carboxypeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE7_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.020e-54 Identity = 89/145 (61.38%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
RFE+EQ L G + VADVP W++ MKD L VEVP DA+GCLQD+H GA GYFPSYTLGA+MACQF+EAAK AIPDLE+ +A G+F+PLK WLN+ +H+ GSLY SPD+LL+ VTG+ + PMALV HL KY+++Y L
Sbjct: 436 RFELEQALFSGDLKVADVPAWWNKAMKDTLDVEVPSDAQGCLQDVHHAA-----GAFGYFPSYTLGAIMACQFYEAAKRAIPDLEDKIASGDFKPLKEWLNQNIHSIGSLYDSPDKLLEVVTGERLDPMALVRHLTRKYSELYKL 575
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A7S2U1I1_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2U1I1_9EUKA) HSP 1 Score: 182 bits (463), Expect = 5.840e-53 Identity = 81/145 (55.86%), Postives = 113/145 (77.93%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
R+++E+ L +G++ V++VP +W+++MKD L ++VP +A+GC+QD+HW V GAIGYFPSY+LGAMMA QF+EAAK IPDLE+ ++ GNFEPLK WLN+++H GSLY SPDELL VTG + P VD+L+ KYT++Y L
Sbjct: 326 RYQMEKRLFEGTVDVSEVPEMWNKEMKDSLKLDVPSNAKGCMQDVHWSV-----GAIGYFPSYSLGAMMAAQFYEAAKAGIPDLEDKISKGNFEPLKAWLNEKIHRVGSLYASPDELLTAVTGKALDPAIYVDYLKNKYTELYDL 465
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A7S2KNN7_BIGNA (Hypothetical protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KNN7_BIGNA) HSP 1 Score: 177 bits (450), Expect = 8.740e-51 Identity = 81/145 (55.86%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
R+ +E+ +++G +VA++P W+ +MK+ L ++VP +A GCLQD+HW V GAIGYFPSY+LGAMMA QF+EAAK+AIPDLEE +A GNF PLKTWLN+ +H GSLY SPDELL VTG P+ + +LR KY+++Y L
Sbjct: 358 RYGLEKAMLEGETTVAELPSKWNAEMKESLDIDVPSNAMGCLQDVHWSV-----GAIGYFPSYSLGAMMAAQFYEAAKKAIPDLEEQIAKGNFSPLKTWLNENIHTVGSLYESPDELLTVVTGKPLDTAIYMKYLREKYSELYSL 497
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A7S4D9D9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9D9_HETAK) HSP 1 Score: 173 bits (439), Expect = 1.660e-50 Identity = 79/145 (54.48%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
R+E+E+ L DGS+ + VP W +MK+LLG+EV G A GCLQDIHW +GA GYFPSY+LGAMMA Q + AA+ +P LE+ + G F LKTWLN++VH +GSL SPDELLK++TG + P +D+LR KYT +YGL
Sbjct: 214 RYELEKKLFDGSLDIEGVPEAWDAQMKELLGLEVDGPARGCLQDIHW-----SIGAFGYFPSYSLGAMMAAQIYAAAQRELPGLEDDIRQGQFAGLKTWLNEKVHQKGSLVASPDELLKEITGAALDPTIFLDYLRTKYTALYGL 353
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A7S3XZ66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ66_HETAK) HSP 1 Score: 173 bits (439), Expect = 8.540e-50 Identity = 79/145 (54.48%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
R+E+E+ L DGS+ + VP W +MK+LLG+EV G A GCLQDIHW +GA GYFPSY+LGAMMA Q + AA+ +P LE+ + G F LKTWLN++VH +GSL SPDELLK++TG + P +D+LR KYT +YGL
Sbjct: 285 RYELEKKLFDGSLDIEGVPEAWDAQMKELLGLEVDGPARGCLQDIHW-----SIGAFGYFPSYSLGAMMAAQIYAAAQRELPGLEDDIRQGQFAGLKTWLNEKVHQKGSLVASPDELLKEITGAALDPTIFLDYLRTKYTALYGL 424
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A7S3E0M5_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E0M5_9CHLO) HSP 1 Score: 170 bits (430), Expect = 2.360e-49 Identity = 79/145 (54.48%), Postives = 104/145 (71.72%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
RFE+EQGL DGSI+V ++P W+E K LG+EVP + EGCLQD+HW A GYFPSYTLGAM ACQFF+ A+++IP+L E +A GNF L+TWL + +H++GSLY S DEL + VTG + P +D+LRAKY +Y +
Sbjct: 194 RFELEQGLFDGSITVDNLPGKWNELYKQYLGIEVPSNKEGCLQDVHWASL-----AFGYFPSYTLGAMYACQFFQHAEKSIPNLREEIAGGNFMNLRTWLRENIHSKGSLYPSADELCEAVTGKKLDPTIYLDYLRAKYRKLYKI 333
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: A0A1X6PAD7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAD7_PORUM) HSP 1 Score: 174 bits (441), Expect = 7.430e-49 Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
RF+IEQGLMDGS++VADVPRVW+EKM++ +GVEVP A GCLQD+HW A GYFPSYT+GAMMA Q AA++A+PDL+ + G F PL+ WL VH GSLY S DELL VTG P+ V+ LRAKY +YGL
Sbjct: 441 RFDIEQGLMDGSVAVADVPRVWAEKMREYVGVEVPDAASGCLQDVHWSGL-----AFGYFPSYTVGAMMAVQLLGAARQALPDLDAQVEKGEFVPLREWLRVNVHEVGSLYASLDELLVAVTGRPLDVDGYVEFLRAKYAPVYGL 580
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Match: D8UIY5_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UIY5_VOLCA) HSP 1 Score: 171 bits (433), Expect = 1.910e-48 Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 1 RFEIEQGLMDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGYFPSYTLGAMMACQFFEAAKEAIPDLEESLADGNFEPLKTWLNKEVHARGSLYGSPDELLKQVTGDPMRPMALVDHLRAKYTDIYGL 435
R+E+E+GL++G + V DVPR+W+E+M LG P DA GCLQDIHW +GA+GYFP+YTLGAM A Q + AAK+ IPDLE+ + G F+PLK+WLN ++H GSL+ S DEL+ TG P+ P +D+LR KY D+Y L
Sbjct: 338 RYELEKGLLEGEVEVEDVPRLWNERMGSYLGATPPNDATGCLQDIHW-----SMGALGYFPTYTLGAMYATQIYAAAKKEIPDLEDKIRAGEFKPLKSWLNDKIHKLGSLHKSGDELMIAATGAPLEPSVFLDYLRDKYNDLYKL 477 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34783.9272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34783.9272.1 >prot_H-paniculata_contig34783.9272.1 ID=prot_H-paniculata_contig34783.9272.1|Name=mRNA_H-paniculata_contig34783.9272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp MDGSISVADVPRVWSEKMKDLLGVEVPGDAEGCLQDIHWYVFSTDLGAIGback to top mRNA from alignment at H-paniculata_contig34783:255..2239+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34783.9272.1 ID=mRNA_H-paniculata_contig34783.9272.1|Name=mRNA_H-paniculata_contig34783.9272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1985bp|location=Sequence derived from alignment at H-paniculata_contig34783:255..2239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34783:255..2239+ >mRNA_H-paniculata_contig34783.9272.1 ID=mRNA_H-paniculata_contig34783.9272.1|Name=mRNA_H-paniculata_contig34783.9272.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig34783:255..2239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |