mRNA_H-paniculata_contig34668.9245.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A6H5JCH2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCH2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.180e-34 Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALIL 225
T RMPYFSYLSML L ETLGWW+G +EVRKVHFAEEYNEM HLRIMESLGGDTRWSDRF ARHAA++Y+ LIL
Sbjct: 429 TVARMPYFSYLSMLFLYETLGWWSGAAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFFVLIL 503
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A7S3XP24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP24_HETAK) HSP 1 Score: 127 bits (319), Expect = 2.190e-33 Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALILV 228
T RMPYFSYLSMLHL ETLGWWT G EVRKVHFAEE+NE+ HL+IM+SLGGD W+DRFFARHAA+LYY L L+
Sbjct: 149 TIARMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLM 224
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A7S3XP26_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP26_HETAK) HSP 1 Score: 127 bits (319), Expect = 3.050e-33 Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALILV 228
T RMPYFSYLSMLHL ETLGWWT G EVRKVHFAEE+NE+ HL+IM+SLGGD W+DRFFARHAA+LYY L L+
Sbjct: 149 TIARMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLM 224
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A835YR99_9STRA (Alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR99_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.080e-31 Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 1
Query: 10 RMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAAL 219
RMPYFSYLSMLHL ETLGWW+ G+EVR+VHF+EE+NEM HL+IME+LGGD RWSDRF ARHAA++YY AL
Sbjct: 364 RMPYFSYLSMLHLYETLGWWSVGTEVRRVHFSEEWNEMNHLKIMEALGGDMRWSDRFLARHAAIVYYWAL 433
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A2K1IAY0_PHYPA (Ubiquinol oxidase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IAY0_PHYPA) HSP 1 Score: 123 bits (309), Expect = 1.310e-31 Identity = 57/76 (75.00%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALILV 228
T RMPYFSY+SMLHL ETLGWW G+EVRKVHFAEE+NEM HLRIMESLGGD W DRFFA+HAA YY L L+
Sbjct: 289 TVARMPYFSYISMLHLYETLGWWRIGAEVRKVHFAEEWNEMHHLRIMESLGGDLEWGDRFFAQHAAFFYYWVLNLM 364
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: D8RPE6_SELML (Ubiquinol oxidase n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RPE6_SELML) HSP 1 Score: 118 bits (296), Expect = 2.540e-31 Identity = 52/70 (74.29%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYY 210
T RMPYFSY+SMLHL ETLGWW G++VRKVHFAEE+NEM HL+IMESLGGD W DRFF +HAA YY
Sbjct: 69 TVARMPYFSYISMLHLYETLGWWRVGADVRKVHFAEEWNEMHHLKIMESLGGDLLWGDRFFGQHAAFFYY 138
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A6U1QBH7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QBH7_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.920e-31 Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALILV 228
T RMPYFSY+SMLHL ETLGWW+ G EVRKVHFAEE+NEM HL IME+LGGD W DRFFARHAA++YY L L+
Sbjct: 287 TVARMPYFSYISMLHLYETLGWWSQGVEVRKVHFAEEWNEMRHLAIMEALGGDQIWLDRFFARHAAIVYYWLLNLI 362
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A0G4F067_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F067_VITBC) HSP 1 Score: 121 bits (304), Expect = 1.800e-30 Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALILV 228
T RMPYF+Y+SMLHL ETLGWW G+EVRKVHFAEE+NEM HL IMESLGGD W DRF ARHAA++YY LIL+
Sbjct: 459 TVARMPYFAYISMLHLYETLGWWRVGTEVRKVHFAEEWNEMHHLFIMESLGGDQAWLDRFLARHAAIVYYWVLILL 534
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A1Y1HI87_KLENI (Ubiquinol oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HI87_KLENI) HSP 1 Score: 120 bits (301), Expect = 2.750e-30 Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYY 210
T RMPYFSY+SMLHL ETLGWW G+EVRKVHFAEE+NEM HL+IMESLGGD +W DRFF +HAA YY
Sbjct: 342 TVARMPYFSYISMLHLYETLGWWRVGAEVRKVHFAEEWNEMHHLKIMESLGGDNQWVDRFFGQHAAFFYY 411
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Match: A0A4D9CVG3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG3_9STRA) HSP 1 Score: 120 bits (302), Expect = 3.230e-30 Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 1
Query: 1 THTRMPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTRWSDRFFARHAALLYYAALILV 228
T RMPYFSY+SMLHL ETLGWWT G++VR+VHFAEE+NE+ HL+IMESLGGD RW DRF ARH+A+ YY L L+
Sbjct: 404 TVARMPYFSYISMLHLYETLGWWTIGTDVRRVHFAEEWNELHHLQIMESLGGDARWLDRFLARHSAIAYYWVLNLM 479 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34668.9245.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34668.9245.1 >prot_H-paniculata_contig34668.9245.1 ID=prot_H-paniculata_contig34668.9245.1|Name=mRNA_H-paniculata_contig34668.9245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp MPYFSYLSMLHLLETLGWWTGGSEVRKVHFAEEYNEMMHLRIMESLGGDTback to top mRNA from alignment at H-paniculata_contig34668:314..1293+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34668.9245.1 ID=mRNA_H-paniculata_contig34668.9245.1|Name=mRNA_H-paniculata_contig34668.9245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=980bp|location=Sequence derived from alignment at H-paniculata_contig34668:314..1293+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34668:314..1293+ >mRNA_H-paniculata_contig34668.9245.1 ID=mRNA_H-paniculata_contig34668.9245.1|Name=mRNA_H-paniculata_contig34668.9245.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=432bp|location=Sequence derived from alignment at H-paniculata_contig34668:314..1293+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |