prot_H-paniculata_contig11421.919.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11421.919.1
Unique Nameprot_H-paniculata_contig11421.919.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length39
Homology
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.260e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
Query:    2 VVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            V+AYKQRLEADECRRKAMDKHLVFLVKQTERY
Sbjct:  394 VIAYKQRLEADECRRKAMDKHLVFLVKQTERY 425          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.260e-11
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
Query:    2 VVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            V+AYKQRLEADECRRKAMDKHLVFLVKQTERY
Sbjct:  301 VIAYKQRLEADECRRKAMDKHLVFLVKQTERY 332          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: A0A835ZKJ3_9STRA (SNF2 family N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKJ3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.480e-9
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 0
Query:    2 VVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            VVAYKQ+LEADE RR+AMDKHLVFLVKQTERY
Sbjct:   78 VVAYKQKLEADEMRRRAMDKHLVFLVKQTERY 109          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: A0A7S2K6G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6G5_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.160e-8
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 0
Query:    2 VVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            VVAYKQ+LE DE ++KAMDKHLVFLVKQTE+Y
Sbjct:   39 VVAYKQKLETDERKQKAMDKHLVFLVKQTEKY 70          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: A0A7S4RJJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RJJ1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.050e-7
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 0
Query:    2 VVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            V++YKQRL+AD  RRKAMD+HLVFLVKQTERY
Sbjct:   77 VISYKQRLDADAQRRKAMDRHLVFLVKQTERY 108          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: A0A7S2UTV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UTV0_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.420e-7
Identity = 23/32 (71.88%), Postives = 30/32 (93.75%), Query Frame = 0
Query:    2 VVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            V+AYKQ+++AD  RRKAMD+HLVFLV+QTE+Y
Sbjct:   94 VIAYKQKVDADTYRRKAMDRHLVFLVRQTEKY 125          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: W7TML5_9STRA (Chromatin remodeling complex subunit (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TML5_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 2.990e-5
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 QVVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            QVVA+KQ+LE +E R++AMDKHL FL+ QTERY
Sbjct:  326 QVVAFKQKLEVEEGRKRAMDKHLGFLLGQTERY 358          
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Match: A0A4D9D5K6_9STRA (HSA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5K6_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 2.990e-5
Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 QVVAYKQRLEADECRRKAMDKHLVFLVKQTERY 33
            QVVA+KQ+LE +E R++AMDKHL FL+ QTERY
Sbjct:  299 QVVAFKQKLEVEEGRKRAMDKHLGFLLGQTERY 331          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11421.919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KKD6_9PHAE2.260e-1196.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTP0_ECTSI2.260e-1196.88Similar to E1a binding protein P400 (Partial) (Fra... [more]
A0A835ZKJ3_9STRA2.480e-990.63SNF2 family N-terminal domain-containing protein (... [more]
A0A7S2K6G5_9STRA3.160e-881.25Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4RJJ1_9STRA1.050e-781.25Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2UTV0_9STRA5.420e-771.88Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
W7TML5_9STRA2.990e-569.70Chromatin remodeling complex subunit (Fragment) n=... [more]
A0A4D9D5K6_9STRA2.990e-569.70HSA domain-containing protein n=1 Tax=Nannochlorop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11421contigH-paniculata_contig11421:321..437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11421.919.1mRNA_H-paniculata_contig11421.919.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11421 321..437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11421.919.1 ID=prot_H-paniculata_contig11421.919.1|Name=mRNA_H-paniculata_contig11421.919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=39bp
QVVAYKQRLEADECRRKAMDKHLVFLVKQTERYRCVAF*
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