mRNA_H-paniculata_contig34550.9222.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: D8LD80_ECTSI (KH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD80_ECTSI) HSP 1 Score: 174 bits (441), Expect = 1.770e-52 Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1
Query: 88 AKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
A+PDFPAL+AREMGGG+DDFRRIRCPPHRLTPLRN WENIVTPTVEHMKLQIR FNRK+RNVELKSS+HTEDASALQKTADF+QAFMLGFEVQ
Sbjct: 47 ARPDFPALTAREMGGGKDDFRRIRCPPHRLTPLRNCWENIVTPTVEHMKLQIR---FNRKTRNVELKSSKHTEDASALQKTADFIQAFMLGFEVQ 138
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: A0A835ZET5_9STRA (RNA-binding protein PNO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZET5_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.370e-40 Identity = 79/121 (65.29%), Postives = 90/121 (74.38%), Query Frame = 1
Query: 13 AAATAALDDDDVEMESSSDVGKGAAAKPDFPALSAREM-GGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
AA A DDDD M G A KP+FP LSA+++ G + D RRIRCPPHRLTPLR SWE+IV P VEHMKLQIR FN K+RNVELK+S+ TED SALQ++ADFVQAFMLGFEVQ
Sbjct: 18 AAEAEAADDDDAAMGEGGQAG--GAMKPNFPPLSAQQLRAGAKSDIRRIRCPPHRLTPLRASWEHIVAPVVEHMKLQIR---FNPKARNVELKASQFTEDPSALQRSADFVQAFMLGFEVQ 133
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: A0A6T5QRH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QRH5_HETAK) HSP 1 Score: 137 bits (344), Expect = 5.580e-38 Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 1
Query: 46 VEMESSSDVGKGAAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
V+ +S+ + + +P+FPALSA+EM GG ++FRRIR P HR TPLR WENI+ P VEHMKLQIR FN K+R+VE+K+SEHTED A+QK ADF+QAFM+GFEVQ
Sbjct: 20 VQDDSTMETEQSGTIRPNFPALSAQEMAGGIEEFRRIRVPAHRYTPLREQWENIMQPVVEHMKLQIR---FNPKTRSVEMKTSEHTEDVGAIQKAADFIQAFMMGFEVQ 125
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: A0A2P4X7L0_9STRA (RNA-binding protein PNO1-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7L0_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.710e-35 Identity = 64/114 (56.14%), Postives = 85/114 (74.56%), Query Frame = 1
Query: 31 LDDDDVEMESSSDVGKGAAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
+ +D ++M++ DV +P+FPALSA++ GG++DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N K+R +ELK+S HT DA ALQK ADFVQA+M+GFEVQ
Sbjct: 22 VQEDQMDMDTEEDV-----VRPNFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQ 127
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: A0A7S2XZF6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZF6_9STRA) HSP 1 Score: 129 bits (324), Expect = 5.890e-35 Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 1
Query: 91 KPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
KP+FPA+ A+ GG+ +FRRIR P HR TPLR W+NI+ P VEHM+LQIR FN K+R+VELK+SEHTEDA ALQK ADFVQAF +GFEVQ
Sbjct: 36 KPNFPAIKAKRTMGGRSEFRRIRVPAHRYTPLREQWQNIMDPVVEHMRLQIR---FNPKTRSVELKTSEHTEDAGALQKAADFVQAFCMGFEVQ 126
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: W4FJZ4_9STRA (KH domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4FJZ4_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.360e-34 Identity = 71/124 (57.26%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 VEAGAAATAALDDDDVEMESSSDVGKGAAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
VEA AA TAA DD+D+++ P FPALSA+ + GG+DDFRR+R P HR TPL+N W NI+ P VEH+KLQ+R N K+R VELK+ HT+DA ALQK ADFVQA+M+GFEVQ
Sbjct: 19 VEAHAAITAA-DDNDMDV------------VPSFPALSAQHLDGGKDDFRRVRVPAHRYTPLKNDWPNIMKPLVEHLKLQVR---MNMKTRCVELKNGPHTDDAGALQKGADFVQAYMMGFEVQ 126
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: K3WKW4_GLOUD (KH domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WKW4_GLOUD) HSP 1 Score: 127 bits (320), Expect = 2.680e-34 Identity = 66/112 (58.93%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 37 DDDVEMESSSDVGKGAAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
DD VE+ D + +P FPALSA+E GG++DFRR+R P HR TPL+N W NI+ P VEH++LQIR N K+R +ELK+SEHT DA ALQK ADFVQA+M+GFEVQ
Sbjct: 24 DDSVEVMGEYDPNT-SVLRPSFPALSAQEQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLRLQIR---MNTKTRCIELKNSEHTIDAGALQKAADFVQAYMMGFEVQ 131
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: A0A6A3YBU7_9STRA (KH domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3YBU7_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.690e-34 Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 VEAGAAATAALDDDDVEMESSSDVGKGAAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
+ A A A A + D +E+E +V + +P FPALSA++ GG++DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N K+R +ELK+S HT DA ALQK ADFVQA+M+GFEVQ
Sbjct: 13 INAQAIAQQAQETDMMEVE---EVEEQGVVRPHFPALSAQQQSGGKNDFRRVRVPAHRYTPLKNDWPNIMKPVVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQ 130
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: A0A2D4BJV4_PYTIN (RNA-binding protein PNO1-like protein n=4 Tax=Pythium TaxID=4797 RepID=A0A2D4BJV4_PYTIN) HSP 1 Score: 127 bits (318), Expect = 5.080e-34 Identity = 61/97 (62.89%), Postives = 78/97 (80.41%), Query Frame = 1
Query: 82 AAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
AA +P+FPALSA+E GG++DFRR+R P HR TPL+N W N++TP V+H+KLQIR N K+R +ELK+S TED+ ALQK ADFVQA+M+GFEVQ
Sbjct: 36 AAMRPNFPALSAQEAEGGKNDFRRVRVPAHRYTPLKNDWPNLMTPIVDHLKLQIR---MNTKTRCIELKNSPFTEDSGALQKAADFVQAYMMGFEVQ 129
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Match: H3G8F2_PHYRM (KH domain-containing protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=H3G8F2_PHYRM) HSP 1 Score: 126 bits (317), Expect = 5.270e-34 Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 1
Query: 67 DVGKGAAAKPDFPALSAREMGGGQDDFRRIRCPPHRLTPLRNSWENIVTPTVEHMKLQIRRASFNRKSRNVELKSSEHTEDASALQKTADFVQAFMLGFEVQ 372
++ + +P+FPALSA++ GG++DFRR+R P HR TPL+N W NI+ P VEH+KLQIR N K+R +ELK+S HT DA ALQK ADFVQA+M+GFEVQ
Sbjct: 19 EIEEDGVVRPNFPALSAQQQAGGKNDFRRVRVPAHRYTPLKNDWPNIMKPIVEHLKLQIR---MNTKTRCIELKNSPHTTDAGALQKAADFVQAYMMGFEVQ 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34550.9222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34550.9222.1 >prot_H-paniculata_contig34550.9222.1 ID=prot_H-paniculata_contig34550.9222.1|Name=mRNA_H-paniculata_contig34550.9222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp VEAGAAATAALDDDDVEMESSSDVGKGAAAKPDFPALSAREMGGGQDDFRback to top mRNA from alignment at H-paniculata_contig34550:691..1849- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34550.9222.1 ID=mRNA_H-paniculata_contig34550.9222.1|Name=mRNA_H-paniculata_contig34550.9222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1159bp|location=Sequence derived from alignment at H-paniculata_contig34550:691..1849- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34550:691..1849- >mRNA_H-paniculata_contig34550.9222.1 ID=mRNA_H-paniculata_contig34550.9222.1|Name=mRNA_H-paniculata_contig34550.9222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig34550:691..1849- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |