prot_H-paniculata_contig3448.9195.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3448.9195.1
Unique Nameprot_H-paniculata_contig3448.9195.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length198
Homology
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BLAST of mRNA_H-paniculata_contig3448.9195.1 vs. uniprot
Match: D7G1A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1A0_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 6.360e-16
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0 
Query:   96 RIATLLEASSSGKGPGRGGQEGEEDKY---IIPGSGMRGVDTSQLSGSERRDAEWFERTAGRESRGELQWFENPVAYVAVFVGVTGLVFVYAVLACFIPGYC 194
            R+A   E SS      + G+EG++D     ++ GSG+RGVDTS+L+G+E+RDA+WF RT  RE    L WFE+PV Y+ + + V  +  V+  L C++PG C
Sbjct:   12 RVAAAAERSSWATSATKRGKEGDDDGDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGALNCYVPGIC 109
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BLAST of mRNA_H-paniculata_contig3448.9195.1 vs. uniprot
Match: A0A6H5KI54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI54_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.090e-12
Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:  112 RGGQEGEEDKY----IIPGSGMRGVDTSQLSGSERRDAEWFERTAGRESRGELQWFENPVAYVAVFVGVTGLVFVYAVLACFIPGYC 194
            RG    ++D      ++ GSG+RGVDTS+L+G+E+RDA+WF RT  RE    L WFE+PV Y+ + + V  +  V+    C++PG C
Sbjct:   83 RGNTSNDDDDIDRIDMLTGSGLRGVDTSKLTGNEKRDADWFLRTNSRE----LVWFEDPVFYLGLCLIVPVVGLVWGAFNCYVPGIC 165
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3448.9195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1A0_ECTSI6.360e-1643.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KI54_9PHAE2.090e-1242.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.628
NoneNo IPR availableTMHMMTMhelixcoord: 167..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3448contigH-paniculata_contig3448:10125..10718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3448.9195.1mRNA_H-paniculata_contig3448.9195.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3448 9636..12055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3448.9195.1 ID=prot_H-paniculata_contig3448.9195.1|Name=mRNA_H-paniculata_contig3448.9195.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp
MMTRRGVSSSVVFVYLLALWHTDQRQAHAFTLTPRTPAARAPGSPTVTNV
RGSSGGGTITTTTTVQTGGGRIFQCRFEDPTMCRHGREKGPSSSARIATL
LEASSSGKGPGRGGQEGEEDKYIIPGSGMRGVDTSQLSGSERRDAEWFER
TAGRESRGELQWFENPVAYVAVFVGVTGLVFVYAVLACFIPGYCLPN*
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