prot_H-paniculata_contig3446.9190.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3446.9190.1
Unique Nameprot_H-paniculata_contig3446.9190.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length692
Homology
BLAST of mRNA_H-paniculata_contig3446.9190.1 vs. uniprot
Match: A0A6H5KJX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX7_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 8.680e-40
Identity = 128/385 (33.25%), Postives = 180/385 (46.75%), Query Frame = 0
Query:  315 LAMSGFAIVAGVLMLLLFVRFLGVSAKDLPSSVIASPAIFALSALAVHSLIILDGTGGTTGSAALRGGGRCSSLALGRRPIIVLSLICATIISAKLDAEDVINVGGTPPYFLATCNRLSYAAAFTPLWLAAFLVEGVYLRALWESRTGQSCVSFVLRSGKEGDWGWMSPCRRLCSCCL--RLGDCDSNAVVGGXXXXXXXXXRSTDRDG-------------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGILFIVIAMVGCSLRRGMT-ETASWAVPMTMLMAAAGEGLLGAGLWRLAQEHCHALRGGVPEPAKPLPVLYSEREGGWIVGPGEPPTVSIFLLGEVLLRQEG 671
            L M+ F +   V M+LL +R LGVSA  LP+  IASP + AL+ LA+HSL+ILDG+GG  G+  L+ GG    + LGRRPII+L+L+ A ++  K+D+       G     +     + +  A  PLW+   ++E VY+ ALWE+ T +S ++F    G   D   +        CCL  R G        GG          S +++G                          X                                             S G + +   +V  SL  G T E A+W VP+TM+ A  G G++GAG+ +LA  H   +RG +P   KPLPV +S++ GGWI GP +PP VSIFLLG+V LRQEG
Sbjct:  415 LTMAAFGVTLSVFMILLSLRLLGVSAHYLPAFWIASPGLLALTLLALHSLVILDGSGGYGGAPVLQVGGNRLVVVLGRRPIILLTLLAAVLVVLKIDS-----FAGGSGVVMEAMEMVHWGYALLPLWVIVCMLEAVYVGALWENYTRRS-LTFPGLFGGVRDLRGLGGLGYWFCCCLGGRGGYAGDGGKGGGCHWQWRRTWWSGEKNGDDDFEDPLVKDYDEYEGKQQXXXXXXXGTSGKFGGAGRESPPTDAQAYASYSSPVRQRVELTPSQRAAAITISVGTILLTACLV--SLISGSTDEKANWGVPLTMIAATTGFGMVGAGVRKLALAHDRRMRGPLPPFTKPLPVFFSDQHGGWIAGPPDPPVVSIFLLGDVRLRQEG 791          
BLAST of mRNA_H-paniculata_contig3446.9190.1 vs. uniprot
Match: D7FZT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT0_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 3.300e-29
Identity = 85/205 (41.46%), Postives = 119/205 (58.05%), Query Frame = 0
Query:  261 PPPPVFSETKKLPAGFLPGTHE-QGHDWREPDGMVAVSARAVRISYLLQAWVRLWLAMSGFAIVAGVLMLLLFVRFLGVSAKDLPSSVIASPAIFALSALAVHSLIILDGTGGTTGSAALRGGGRCSSLALGRRPIIVLSLICATIISAKLDAEDVINVGGTPPYFLATCNRLSYAAAFTPLWLAAFLVEGVYLRALWESRTGQS 464
            PP P     K  PA    G  E +G   R        + RAVR+S LLQAW+RLWL M+ F +   V M+LL +R LGVS+  L +  IASP + AL+ LA+HSL+ILDG+GG  G+  LR GG    + LGRRP+I+L+L+ A ++  K+D+     V G     +    ++ +   F PLW+   ++E VYL ALWE+ T +S
Sbjct:  346 PPTPGLKWPKAPPATTSSGGGEGEGDSHRS-------AQRAVRVSVLLQAWLRLWLTMAAFGVTLSVFMILLSLRLLGVSSHHLTAFWIASPGLLALTLLALHSLVILDGSGGYGGAPVLRVGGNRLVVVLGRRPVILLTLLAAVLVVLKIDS-----VAGGSGAVMEAIEKVHWGYVFLPLWVIVCMLETVYLGALWENYTRRS 538          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3446.9190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJX7_9PHAE8.680e-4033.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZT0_ECTSI3.300e-2941.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 594..617
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 368..393
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 413..431
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 337..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 454..562
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 432..453
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 563..588
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 348..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 394..412
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 589..593
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..312
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 618..691
NoneNo IPR availableTMHMMTMhelixcoord: 310..332
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 389..408
NoneNo IPR availableTMHMMTMhelixcoord: 434..456
NoneNo IPR availableTMHMMTMhelixcoord: 562..584
NoneNo IPR availableTMHMMTMhelixcoord: 347..369
NoneNo IPR availableTMHMMTMhelixcoord: 594..616

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3446contigH-paniculata_contig3446:655..8845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3446.9190.1mRNA_H-paniculata_contig3446.9190.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3446 109..9149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3446.9190.1 ID=prot_H-paniculata_contig3446.9190.1|Name=mRNA_H-paniculata_contig3446.9190.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=692bp
MLGEKFRPFWEYFDVTPSERRPLLPQKKRRSSRDVAAVEVDAIDQLEGLP
ILLARAVAVYTLALVFSTLLGAIRAGVVDTIPKAVVMVPVLLTHMWFVHE
MIVSVKWVRRTMIEEERKRRIALRRISSRQRRNSRSPPPALPSPLVTTVI
SSDTVDEDSPTAPILWKTRSLVTAKKAVSATMAAGTASVAATSESAGSVI
GSPTMGSPHSVSGAGPENGGSSGSDRERKGEHQLDIHDGEYDKRLGIVEG
GSKEGEGVYSPPPPVFSETKKLPAGFLPGTHEQGHDWREPDGMVAVSARA
VRISYLLQAWVRLWLAMSGFAIVAGVLMLLLFVRFLGVSAKDLPSSVIAS
PAIFALSALAVHSLIILDGTGGTTGSAALRGGGRCSSLALGRRPIIVLSL
ICATIISAKLDAEDVINVGGTPPYFLATCNRLSYAAAFTPLWLAAFLVEG
VYLRALWESRTGQSCVSFVLRSGKEGDWGWMSPCRRLCSCCLRLGDCDSN
AVVGGGGGGYGRGRRSTDRDGRRRPPSRRIGQQRRTSFHQTERRVSFYSA
ARRRAVLTPSQRAAAAAISGGILFIVIAMVGCSLRRGMTETASWAVPMTM
LMAAAGEGLLGAGLWRLAQEHCHALRGGVPEPAKPLPVLYSEREGGWIVG
PGEPPTVSIFLLGEVLLRQEGFGTGFVPGAGDAFHRWAPYV*
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