prot_H-paniculata_contig34442.9187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34442.9187.1
Unique Nameprot_H-paniculata_contig34442.9187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: D7G4C2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4C2_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 9.840e-32
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            MVLISMFF MMLTNWGDIN DGES DPK GWTAMWLTT GQWVC+++YAW+L+AP +FPDRDF+
Sbjct:  404 MVLISMFFGMMLTNWGDINEDGESSDPKNGWTAMWLTTTGQWVCYIIYAWTLVAPLVFPDRDFS 467          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A836CG76_9STRA (Serine incorporator/TMS membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG76_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.210e-22
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGDINTDGES-------DDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            M+L+SMFF MMLTNWG + +D  S        DPK G  AMWLT  GQW C LLY W+L+AP++FPDRDF+
Sbjct:  383 MILLSMFFGMMLTNWGVVQSDSSSIENPATYSDPKNGEAAMWLTAAGQWACMLLYTWTLVAPKLFPDRDFS 453          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S2BQB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BQB8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.180e-16
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            M+LI+M++ M+LT+WG+++       P  G  AMW+     W+C LLY W+L+APR+FPDRDF+
Sbjct:  363 MMLIAMYWCMVLTDWGNVDRSSSGASPTNGKIAMWMNITASWICVLLYGWTLVAPRIFPDRDFS 426          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S2RGK7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGK7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.620e-15
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            M+LI  ++ M+LTNWGD +    +  P  G   MW+     WVC LLY WSL+AP +FPDRDF+
Sbjct:  384 MLLICQYWCMVLTNWGDSSASNSNSSPAAGDVVMWMNISASWVCCLLYIWSLVAPMIFPDRDFS 447          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A383VJK9_TETOB (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VJK9_TETOB)

HSP 1 Score: 77.0 bits (188), Expect = 5.540e-15
Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    3 LISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDF 63
            L SM+ AM++T WG +  + E D    GWT++W+ TG +WV  LLY+W+LIAP MFPDRDF
Sbjct:  368 LASMYIAMLMTGWGAV--EQERDRLDVGWTSVWVKTGAEWVTGLLYSWTLIAPAMFPDRDF 426          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S2FQZ7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FQZ7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 8.100e-15
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGD----INTDGESDD--PKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            M LISM++ M+LTNW +     N DG+  D  P  G TAMW+     W+C LLY W+L+AP ++PDRDF+
Sbjct:  101 MTLISMYWCMVLTNWANPVTGTNEDGDVKDGSPTGGITAMWMNIVACWICVLLYIWTLVAPILYPDRDFS 170          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S0SV31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SV31_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.070e-14
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    2 VLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRD 62
            +L S ++AM+LTNW  + ++     P+QG  AMWL     WV   LY W+LIAP++FPDRD
Sbjct:  124 ILASAYYAMVLTNWATLQSNYNISSPRQGQAAMWLQASAIWVALSLYVWTLIAPKLFPDRD 184          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S2I2C9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2C9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.100e-14
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            + L+S ++AM LT WG I T G + +P  G  +MW+    QW+   LY W+L+APR+FPDRDF+
Sbjct:  410 LALVSCWYAMALTGWGAIETGGNAANPDVGKASMWMIIASQWLVLTLYLWTLVAPRLFPDRDFS 473          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S3P415_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P415_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.130e-14
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    4 ISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            IS + AM LT+WG+I  +G   +P+ G   MW+  G QW+   LY W+L+APR+FPDRDF+
Sbjct:  469 ISCWMAMSLTSWGEIAAEGNLANPQVGRVGMWIIVGSQWIVLTLYLWTLVAPRIFPDRDFS 529          
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Match: A0A7S3QC27_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QC27_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.500e-14
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MVLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAWSLIAPRMFPDRDFA 64
            + LI+ ++AM LT+WG I   G   +P+ G T+MW+  G QW+   LY W+L+AP++FPDRDF+
Sbjct:  402 LALITCWYAMALTSWGSITDGGTVANPQVGRTSMWMIIGSQWLMVALYLWTLLAPKLFPDRDFS 465          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34442.9187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C2_ECTSI9.840e-3279.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CG76_9STRA7.210e-2257.75Serine incorporator/TMS membrane protein n=1 Tax=T... [more]
A0A7S2BQB8_9STRA3.180e-1646.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RGK7_9STRA1.620e-1548.44Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A383VJK9_TETOB5.540e-1554.10Uncharacterized protein n=2 Tax=Scenedesmaceae Tax... [more]
A0A7S2FQZ7_9STRA8.100e-1548.57Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0SV31_9STRA1.070e-1447.54Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2I2C9_9STRA1.100e-1446.88Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3P415_9STRA1.130e-1449.18Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A7S3QC27_9STRA1.500e-1446.88Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 1..62
e-value: 5.7E-20
score: 71.7
IPR005016Serine incorporator/TMS membrane proteinPANTHERPTHR10383SERINE INCORPORATORcoord: 1..62
IPR029559Membrane protein Tms1-likePANTHERPTHR10383:SF9SERINE INCORPORATOR 3coord: 1..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..16
score: 0.526
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34442contigH-paniculata_contig34442:2067..2261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34442.9187.1mRNA_H-paniculata_contig34442.9187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34442 2067..2279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34442.9187.1 ID=prot_H-paniculata_contig34442.9187.1|Name=mRNA_H-paniculata_contig34442.9187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
MVLISMFFAMMLTNWGDINTDGESDDPKQGWTAMWLTTGGQWVCFLLYAW
SLIAPRMFPDRDFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005016TDE1/TMS
IPR029559Tms1-like