prot_H-paniculata_contig34425.9182.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34425.9182.1
Unique Nameprot_H-paniculata_contig34425.9182.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length103
Homology
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BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A7S2XXF5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXF5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.940e-53
Identity = 87/95 (91.58%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            Q+TW+KVNRDFGSIFSTLLPGTSAKL PPEGGTV DGLEVKVAFG VWKE+LTELSGGQRSLLALSL+LSLLLFKPAPMYILDE+DAALDLSHTQ
Sbjct:   27 QTTWVKVNRDFGSIFSTLLPGTSAKLDPPEGGTVLDGLEVKVAFGKVWKESLTELSGGQRSLLALSLVLSLLLFKPAPMYILDEIDAALDLSHTQ 121
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A836CJV5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.950e-52
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            Q+TW+KVNRDFGSIFSTLLPGTSAKL+PPEGGT  DGLEVKVAFGSVWKE+LTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct:  175 QTTWVKVNRDFGSIFSTLLPGTSAKLEPPEGGTALDGLEVKVAFGSVWKESLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 269
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A7S3XPQ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ9_HETAK)

HSP 1 Score: 171 bits (434), Expect = 4.320e-50
Identity = 86/95 (90.53%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            Q+TW+KVNRDFGSIF TLLPGTSAKL PP+GG+V DGLEVKVAFG+VWKE+LTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct:  202 QTTWVKVNRDFGSIFGTLLPGTSAKLDPPQGGSVLDGLEVKVAFGNVWKESLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 296
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: T1DFG2_SILLA (Structural maintenance of chromosomes protein 2-2 (Fragment) n=1 Tax=Silene latifolia TaxID=37657 RepID=T1DFG2_SILLA)

HSP 1 Score: 162 bits (409), Expect = 1.730e-49
Identity = 80/93 (86.02%), Postives = 89/93 (95.70%), Query Frame = 0 
Query:    3 TWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            TW+KVN DFGSIFSTLLPGT+AKL+PPEGGT  DGLEV+VAFG VWK++L+ELSGGQRSLLALSLIL+LLLFKPAP+YILDEVDAALDLSHTQ
Sbjct:    3 TWVKVNSDFGSIFSTLLPGTTAKLEPPEGGTFLDGLEVRVAFGGVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQ 95
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A836CJQ0_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ0_9STRA)

HSP 1 Score: 176 bits (446), Expect = 4.410e-49
Identity = 89/95 (93.68%), Postives = 93/95 (97.89%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            Q+TW+KVNRDFGSIFSTLLPGTSAKL+PPEGGT  DGLEVKVAFGSVWKE+LTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct: 1053 QTTWVKVNRDFGSIFSTLLPGTSAKLEPPEGGTALDGLEVKVAFGSVWKESLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 1147
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A7S1H4H2_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H4H2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.800e-48
Identity = 81/95 (85.26%), Postives = 90/95 (94.74%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            + TW+KVNRDFGS+FSTLLPGTSAKL+PPEG    +GLEVKVAFG+VWKE+L+ELSGGQRSL+ALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct:   25 ERTWVKVNRDFGSMFSTLLPGTSAKLEPPEGLEAWEGLEVKVAFGNVWKESLSELSGGQRSLIALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 119
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BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A6H5K638_9PHAE (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K638_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 2.840e-48
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            Q+TW+KVNRDFGSIFSTLLPGTSAKLQPPEG TV  GLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct: 1046 QTTWLKVNRDFGSIFSTLLPGTSAKLQPPEGETVMAGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 1140
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A7S2H5V1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5V1_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.930e-48
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            + TWIKVNRDFGSIFSTLLPGTSAKL PPEGGTV DGLEVKVAFGSVWKE+L+ELSGGQRSL+ALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct:  700 EKTWIKVNRDFGSIFSTLLPGTSAKLDPPEGGTVLDGLEVKVAFGSVWKESLSELSGGQRSLIALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 794
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A7S3DSR2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DSR2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.070e-47
Identity = 83/95 (87.37%), Postives = 88/95 (92.63%), Query Frame = 0 
Query:    1 QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            +STW KVN DFGSIFSTLLPGTSAKL+PPEG    +GLEVKVAFG VWKE+L+ELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ
Sbjct:   94 ESTWKKVNGDFGSIFSTLLPGTSAKLEPPEGMAAWEGLEVKVAFGDVWKESLSELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 188
[Close]
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Match: A0A097PJ81_SARHE (Structural maintenance of chromosomes protein 2 (Fragment) n=1 Tax=Saruma henryi TaxID=13258 RepID=A0A097PJ81_SARHE)

HSP 1 Score: 160 bits (405), Expect = 4.770e-47
Identity = 80/93 (86.02%), Postives = 89/93 (95.70%), Query Frame = 0 
Query:    3 TWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKETLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQ 95
            TW+KVN+DFGSIFSTLLPGT AKL+PPEG T  DGLEV+VAFGSVWK++L+ELSGGQRSLLALSLIL+LLLFKPAP+YILDEVDAALDLSHTQ
Sbjct:  150 TWVKVNKDFGSIFSTLLPGTMAKLEPPEGCTFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQ 242
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34425.9182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XXF5_9STRA1.940e-5391.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CJV5_9STRA2.950e-5293.68P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3XPQ9_HETAK4.320e-5090.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
T1DFG2_SILLA1.730e-4986.02Structural maintenance of chromosomes protein 2-2 ... [more]
A0A836CJQ0_9STRA4.410e-4993.68Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S1H4H2_9STRA2.800e-4885.26Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A6H5K638_9PHAE2.840e-4894.74Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2H5V1_9STRA2.930e-4892.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3DSR2_9STRA4.070e-4787.37Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A097PJ81_SARHE4.770e-4786.02Structural maintenance of chromosomes protein 2 (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..99
e-value: 1.9E-25
score: 91.3
NoneNo IPR availablePANTHERPTHR43977:SF2coord: 2..95
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 2..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 54..95
e-value: 1.4E-14
score: 54.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34425contigH-paniculata_contig34425:1255..2065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34425.9182.1mRNA_H-paniculata_contig34425.9182.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34425 1255..2065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34425.9182.1 ID=prot_H-paniculata_contig34425.9182.1|Name=mRNA_H-paniculata_contig34425.9182.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
QSTWIKVNRDFGSIFSTLLPGTSAKLQPPEGGTVTDGLEVKVAFGSVWKE
TLTELSGGQRSLLALSLILSLLLFKPAPMYILDEVDAALDLSHTQVNERT
TK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase