prot_H-paniculata_contig34378.9175.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34378.9175.1
Unique Nameprot_H-paniculata_contig34378.9175.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length128
Homology
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 2.440e-65
Identity = 115/126 (91.27%), Postives = 122/126 (96.83%), Query Frame = 0
Query:    3 VVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQLGPLQ 128
            VVFATETLAAGVNMPARATVITTLSKRIDTG+VKL PSQLLQMGGRAGRRGKD SGSVVLMRSRFEDC+EAHRLLL+PMDGIESQFKSSYGMAVGVLRTRDMASA+VLVEKSFGNF+R K++GP Q
Sbjct:  710 VVFATETLAAGVNMPARATVITTLSKRIDTGIVKLNPSQLLQMGGRAGRRGKDSSGSVVLMRSRFEDCIEAHRLLLSPMDGIESQFKSSYGMAVGVLRTRDMASARVLVEKSFGNFVRRKRVGPAQ 835          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.010e-50
Identity = 92/127 (72.44%), Postives = 109/127 (85.83%), Query Frame = 0
Query:    2 QVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQLGPLQ 128
            +VVFATETLAAGVNMPAR+TVI+ LSKR DTG++ L PSQLLQM GRAGRRG DV G+VV+MRSRFED  +AHRLLL P+D IES+F+SSY MAV +L+TRD+ SAK LVE SFGN+L+MK+L P Q
Sbjct:  550 KVVFATETLAAGVNMPARSTVISVLSKRGDTGIMPLLPSQLLQMAGRAGRRGLDVLGNVVVMRSRFEDVTDAHRLLLLPLDSIESKFRSSYSMAVNILKTRDLGSAKTLVEMSFGNYLQMKRLSPAQ 676          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: K8YRA8_NANGC (Type iii restriction res subunit n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRA8_NANGC)

HSP 1 Score: 162 bits (411), Expect = 1.840e-46
Identity = 86/128 (67.19%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQLGPLQ 128
            I+VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GRAGRRGKD  G VVLMRSR ED ++A  LL AP+D I S F+SSY M V +LRTRD+ S K+LVE+SFGN+L+   LG  Q
Sbjct:  125 IRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGRAGRRGKDTMGHVVLMRSRSEDALDAFNLLCAPVDSIRSHFRSSYAMVVNILRTRDLESCKLLVERSFGNYLKAYSLGEEQ 252          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: W7TFJ8_9STRA (Dsh domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFJ8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.070e-44
Identity = 86/128 (67.19%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQLGPLQ 128
            I+VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GRAGRRGKD  G VVLMRSR ED ++A  LL AP+D I S F+SSY M V +LRTRD+ S K+LVE+SFGN+L+   LG  Q
Sbjct:  331 IRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGRAGRRGKDTMGHVVLMRSRSEDALDAFNLLCAPVDSIRSHFRSSYAMVVNILRTRDLESCKLLVERSFGNYLKAYSLGEEQ 458          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: A0A4D9D0G8_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0G8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.410e-44
Identity = 86/128 (67.19%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQLGPLQ 128
            I+VVFATETLAAGVNMPARATVI+TLSK+I    + L PSQLLQM GRAGRRGKD  G VVLMRSR ED ++A  LL AP+D I S F+SSY M V +LRTRD+ S K+LVE+SFGN+L+   LG  Q
Sbjct:  589 IRVVFATETLAAGVNMPARATVISTLSKKIGKVTINLQPSQLLQMAGRAGRRGKDTMGHVVLMRSRSEDALDAFNLLCAPVDSIRSHFRSSYAMVVNILRTRDLESCKLLVERSFGNYLKAYSLGEEQ 716          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: S0F3W1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3W1_CHOCR)

HSP 1 Score: 141 bits (355), Expect = 2.220e-36
Identity = 75/125 (60.00%), Postives = 97/125 (77.60%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRI-DTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQL 124
            I+VVFATETLAAG+NMPAR TVI++LSKR  D G+V LT S++LQM GRAGRRGKDV G  V++RSR E  +EA ++L A +D ++S+F  +YGM + +L  R +  AK LV++SFGNFLR KQL
Sbjct:  512 IKVVFATETLAAGINMPARTTVISSLSKRAGDAGIVSLTTSEVLQMAGRAGRRGKDVLGHSVVLRSRNEGALEAFKVLTADVDALQSKFTPNYGMVLNLLSARPLEDAKKLVDRSFGNFLREKQL 636          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: A0A0G4EJS4_VITBC (Uncharacterized protein n=5 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJS4_VITBC)

HSP 1 Score: 138 bits (347), Expect = 2.660e-35
Identity = 74/123 (60.16%), Postives = 93/123 (75.61%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQ 123
            I+V+FATETLAAGVNMPAR T IT L K    G+ +L+ SQLLQM GRAGRRGKD  GSVVL+RS   D  EA   LLAP+D I+SQF+ +YG+A  VLR RD++ ++ L+EKSFG FL+ ++
Sbjct:  494 IKVLFATETLAAGVNMPARTTAITVLRKYGSEGLTRLSTSQLLQMAGRAGRRGKDHEGSVVLIRSDRTDAREAAMTLLAPLDSIKSQFRITYGLATNVLRVRDLSKSRELIEKSFGVFLQARR 616          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: A0A7S1HEM1_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEM1_HEMAN)

HSP 1 Score: 126 bits (317), Expect = 7.740e-34
Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQ 123
            I+VV ATETLAAG+NMPAR+TVIT+LSKR   G+  LT ++L QM GRAGRRGKD  G  V+MRSR+E   EA  +++   D ++S+F  SYGM + +L  R M+  K  VE SFG+FL  ++
Sbjct:  102 IKVVTATETLAAGINMPARSTVITSLSKRTSDGINSLTSNELRQMSGRAGRRGKDTVGHAVMMRSRWEGAPEAFTIVIQEPDPLKSKFSPSYGMVLSLLSVRPMSECKEFVENSFGSFLAQRE 224          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: A0A2V3J1X3_9FLOR (DExH-box ATP-dependent RNA helicase DExH15 chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1X3_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 8.060e-34
Identity = 71/124 (57.26%), Postives = 94/124 (75.81%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRI-DTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFLRMKQ 123
            I+VVFATETLAAG+NMPAR TVI++LSKR  D G   LT S++LQM GRAGRRGKD  G  V++RSR E  +EA ++L A +D +ES+F  +YGM + +L +R +  AK LV++SFGNFLR ++
Sbjct:  524 IKVVFATETLAAGINMPARTTVISSLSKRTGDIGFTNLTTSEVLQMAGRAGRRGKDTVGHSVILRSRNEGALEAFKVLTAGVDALESKFTPNYGMVLNLLSSRPLKDAKKLVDRSFGNFLRERE 647          
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Match: A0A3C1LYW9_9CYAN (DEAD/DEAH box helicase n=1 Tax=Cyanobacteria bacterium UBA8156 TaxID=2055767 RepID=A0A3C1LYW9_9CYAN)

HSP 1 Score: 131 bits (329), Expect = 6.880e-33
Identity = 70/119 (58.82%), Postives = 88/119 (73.95%), Query Frame = 0
Query:    1 IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAGRRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLRTRDMASAKVLVEKSFGNFL 119
            I+VVFATETLAAG+NMPAR TVI++LSKR D G   LT S+ LQM GRAGRRG D  G VV +++R+E  ++A RL +A  D + SQF  SYGM + +L+T  MA AK LVE+SFG +L
Sbjct:  340 IKVVFATETLAAGINMPARTTVISSLSKRTDRGHRALTASEFLQMAGRAGRRGMDAIGHVVTLQTRYEGPLDAERLAIAKADPLASQFTPSYGMVLNLLQTHPMARAKELVERSFGQYL 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34378.9175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G373_ECTSI2.440e-6591.27DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z819_9STRA4.010e-5072.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K8YRA8_NANGC1.840e-4667.19Type iii restriction res subunit n=1 Tax=Nannochlo... [more]
W7TFJ8_9STRA3.070e-4467.19Dsh domain protein n=1 Tax=Nannochloropsis gaditan... [more]
A0A4D9D0G8_9STRA6.410e-4467.19Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
S0F3W1_CHOCR2.220e-3660.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0G4EJS4_VITBC2.660e-3560.16Uncharacterized protein n=5 Tax=Vitrella brassicaf... [more]
A0A7S1HEM1_HEMAN7.740e-3453.66Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A2V3J1X3_9FLOR8.060e-3457.26DExH-box ATP-dependent RNA helicase DExH15 chlorop... [more]
A0A3C1LYW9_9CYAN6.880e-3358.82DEAD/DEAH box helicase n=1 Tax=Cyanobacteria bacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..74
e-value: 3.1E-23
score: 84.1
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..124
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 1..124
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34378contigH-paniculata_contig34378:441..1670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34378.9175.1mRNA_H-paniculata_contig34378.9175.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34378 441..1670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34378.9175.1 ID=prot_H-paniculata_contig34378.9175.1|Name=mRNA_H-paniculata_contig34378.9175.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp
IQVVFATETLAAGVNMPARATVITTLSKRIDTGVVKLTPSQLLQMGGRAG
RRGKDVSGSVVLMRSRFEDCVEAHRLLLAPMDGIESQFKSSYGMAVGVLR
TRDMASAKVLVEKSFGNFLRMKQLGPLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase