prot_H-paniculata_contig3435.9171.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3435.9171.1
Unique Nameprot_H-paniculata_contig3435.9171.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length181
Homology
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BLAST of mRNA_H-paniculata_contig3435.9171.1 vs. uniprot
Match: D8LTN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTN9_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 7.090e-21
Identity = 97/152 (63.82%), Postives = 116/152 (76.32%), Query Frame = 0 
Query:   23 PSPGVIGGAAIVGATAGAIVGGPLVAL-LGAGATAAICLRNDQAGEAARSTGKAGLAVVNKGKEVNERYQVTEKVKVALQGTCQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISARAMDGITSTMNGVASAITEEDDAPKVEGASK 173
            P  GV+GGAA+VGAT G ++ GPLVA+ LGAGA AA CLR DQAG+ ARSTG+AGLAVV KGKE+N +Y V +KVK A   T   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +RA +     M+ V +A++++DD     GA+K
Sbjct:   16 PPAGVVGGAALVGATTGLLLSGPLVAIGLGAGA-AACCLRRDQAGDVARSTGQAGLAVVEKGKEINTQYGVADKVKGAAHSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRAGEAFGGAMDSVTNAVSKKDDGQDGWGATK 166
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BLAST of mRNA_H-paniculata_contig3435.9171.1 vs. uniprot
Match: R1D5M4_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D5M4_EMIHU)

HSP 1 Score: 67.8 bits (164), Expect = 2.780e-11
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:   15 TRDGNEANPSPG-------VIGGAAIVGATAGAIVGGPLVALLGAGATAAICLRNDQAGEAARSTGKAGLAVVNKGKEVNERYQVTEKV 96
            + +G E  P+P        V+ GAA VG  A  ++ GPLV L  AG  A    RND+ G AA+STGKA LA+ +K +E+NE +++++KV
Sbjct:    3 SEEGEEVTPAPSSEKFDGKVVAGAAAVGGVAAFVLAGPLVGLAAAGGAAYAATRNDEVGAAAKSTGKAALAIGDKAREINEEHKISDKV 91
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BLAST of mRNA_H-paniculata_contig3435.9171.1 vs. uniprot
Match: A0A0G4EAI7_VITBC (MIT domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAI7_VITBC)

HSP 1 Score: 55.8 bits (133), Expect = 4.910e-6
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 0 
Query:   31 AAIVGATAGAIVGGPLVALLGAGATAAICLRNDQAGEAARSTGKAGLAVVNKGKEVNERYQVTEKVKVALQGTCQK 106
            A  +GA AG ++ GPL  + G    A    R D+AGE AR  G+  L  V+K KE+N+RY +TEK   A + T  K
Sbjct:  124 AGAIGAVAGGLLLGPLGLVAGGAGAAYAATRGDKAGEVARGVGQGALGAVDKTKEMNQRYHITEKTTEAAKATYNK 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3435.9171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTN9_ECTSI7.090e-2163.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
R1D5M4_EMIHU2.780e-1142.70Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A0G4EAI7_VITBC4.910e-642.11MIT domain-containing protein n=3 Tax=Vitrella bra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3435contigH-paniculata_contig3435:7069..15982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3435.9171.1mRNA_H-paniculata_contig3435.9171.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3435 6190..17017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3435.9171.1 ID=prot_H-paniculata_contig3435.9171.1|Name=mRNA_H-paniculata_contig3435.9171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
MAQQGSENRKDMDETRDGNEANPSPGVIGGAAIVGATAGAIVGGPLVALL
GAGATAAICLRNDQAGEAARSTGKAGLAVVNKGKEVNERYQVTEKVKVAL
QGTCQKARELDQTHGIVDKTKAGAQRAWERVRQIESEHRISARAMDGITS
TMNGVASAITEEDDAPKVEGASKPTGSATK*
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