mRNA_H-paniculata_contig34338.9167.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: D7G0R3_ECTSI (Aldehyde Dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R3_ECTSI) HSP 1 Score: 153 bits (387), Expect = 5.800e-41 Identity = 87/165 (52.73%), Postives = 93/165 (56.36%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPLGERVS 495
RYL YG ATA+AA M PEVED+FTRLIMRVAPKSYAQAN EVVVTRRFLENFSG DNVRMLARSF+VPGDH GQASTG+RWPFGPVA+VSPFNFPLGE+ S
Sbjct: 66 RYLAYGSATAKAAALMAVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSG---------------------------------------------------------------DNVRMLARSFSVPGDHVGQASTGYRWPFGPVAIVSPFNFPLGEQPS 167
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: A0A6H5J7Q9_9PHAE (Aldedh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q9_9PHAE) HSP 1 Score: 133 bits (334), Expect = 9.060e-34 Identity = 76/150 (50.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 46 MREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPLGERVS 495
M PEVED+FTRLIMRVAPKSYAQAN EVVVTRRFLENFSG DNVRMLARSF+VPGDH GQ STG+RWPFGPVA+VSPFNFPLGE+ S
Sbjct: 1 MSVPEVEDFFTRLIMRVAPKSYAQANGEVVVTRRFLENFSG---------------------------------------------------------------DNVRMLARSFSVPGDHVGQTSTGYRWPFGPVAIVSPFNFPLGEQPS 87
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: A0A835Z7L1_9STRA (Aldehyde dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L1_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.360e-30 Identity = 73/160 (45.62%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RY+TYG +A+A+ MR+PEVE +F RLI RVAPKSYAQA EVVV+RRFLENFSG D VR LARSF+ PGDH GQ S+G+RWPFGPVAVVSPFNFPL
Sbjct: 89 RYVTYGAVSAKASAEMRKPEVERFFARLIQRVAPKSYAQALGEVVVSRRFLENFSG---------------------------------------------------------------DQVRYLARSFSDPGDHQGQHSSGWRWPFGPVAVVSPFNFPL 185
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: A0A397EI71_9STRA (Aldedh domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EI71_9STRA) HSP 1 Score: 116 bits (291), Expect = 6.770e-29 Identity = 68/160 (42.50%), Postives = 77/160 (48.12%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RYL YG + +AA +REP +E YF RLI RVAPKSY QA EVVVTR+FLENFSG D VR LARSF VPGDH GQ STG RWP+GPVA+++PFNFP
Sbjct: 111 RYLLYGDISHKAAAMLREPHIEHYFIRLIQRVAPKSYIQAKNEVVVTRKFLENFSG---------------------------------------------------------------DQVRFLARSFGVPGDHLGQMSTGHRWPYGPVALITPFNFPF 207
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: L1JFF5_GUITC (Aldedh domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFF5_GUITC) HSP 1 Score: 120 bits (301), Expect = 1.170e-28 Identity = 68/160 (42.50%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RYL YG + +AA +R+PEVE +F RLI RV+PKSYAQA EVVVTR+FLENFSG D VR LARSF+VPGDH GQ S G+RWP+GPVA+++PFNFPL
Sbjct: 139 RYLLYGEISLKAANMLRDPEVERFFARLIQRVSPKSYAQARGEVVVTRKFLENFSG---------------------------------------------------------------DQVRFLARSFSVPGDHTGQQSQGYRWPYGPVALITPFNFPL 235
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: W9QIA3_9ROSA (Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1 n=3 Tax=Rosales TaxID=3744 RepID=W9QIA3_9ROSA) HSP 1 Score: 120 bits (301), Expect = 1.420e-28 Identity = 77/166 (46.39%), Postives = 102/166 (61.45%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFS-GERCGGSLN----GSQIRWAKWYPMRREVITLLFASL-KFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RYL +G +A+AA + +P+V D+FTRLI RV+PKSY QA AEV VTR+FLENFS G G S GS +++ + +++ + A L K+ +N L C + K R VR LARSF VPG+H GQ S GFRWP+GPVA+++PFNFPL
Sbjct: 158 RYLLFGDISAKAAHLLSQPKVSDFFTRLIQRVSPKSYQQAYAEVYVTRKFLENFSDGVEIGASWKFRYLGSIVQYEG--DIEKDIQHRIKAGLVKW-----KNAMGVL--CDGKMPIKLKGKFYR-TVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPL 313
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: A0A024UJT7_9STRA (Aldedh domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJT7_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.710e-28 Identity = 70/160 (43.75%), Postives = 77/160 (48.12%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RYL YG + RAA +REP +E YF RLI RVAPKSY QA EVVVTR+FLENFSG D VR LARSF VPGDH GQ S G RWP+GPVA+V+PFNFPL
Sbjct: 106 RYLLYGEISNRAAAMLREPHIEHYFVRLIQRVAPKSYIQAKNEVVVTRKFLENFSG---------------------------------------------------------------DQVRFLARSFGVPGDHLGQMSNGHRWPYGPVALVTPFNFPL 202
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: I0YJ92_COCSC (Aldehyde dehydrogenase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YJ92_COCSC) HSP 1 Score: 118 bits (295), Expect = 6.270e-28 Identity = 69/160 (43.12%), Postives = 77/160 (48.12%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RY YG A+AA MR+PEVEDYFT+L+ RVAPK AQA AEVVVTRRFLENFSG D VR ARSF V GDH GQ STG RWP+GPV +++PFNFPL
Sbjct: 102 RYNMYGAVIAKAAEEMRKPEVEDYFTKLVQRVAPKHDAQARAEVVVTRRFLENFSG---------------------------------------------------------------DQVRFTARSFGVAGDHAGQMSTGHRWPYGPVGLITPFNFPL 198
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: A0A2P6VC93_9CHLO (Aldehyde dehydrogenase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VC93_9CHLO) HSP 1 Score: 117 bits (294), Expect = 8.480e-28 Identity = 67/160 (41.88%), Postives = 81/160 (50.62%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RY+ +G TA+AA MR PEVED+F RLIMR +PKSYAQA+ EV VTR+FLENFSG D VR LA+ F+VPGDH GQ+S G RWP+GPVA+++PFNFPL
Sbjct: 99 RYVMWGDITAKAAAEMRRPEVEDHFARLIMRTSPKSYAQASGEVRVTRKFLENFSG---------------------------------------------------------------DQVRFLAKGFSVPGDHPGQSSHGHRWPYGPVALITPFNFPL 195
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Match: A0A397A4E2_9STRA (Aldedh domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A4E2_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.020e-27 Identity = 68/160 (42.50%), Postives = 77/160 (48.12%), Query Frame = 1
Query: 1 RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFLENFSGERCGGSLNGSQIRWAKWYPMRREVITLLFASLKFASCCCQNVRAFLPACQNVACLLSKISNMRDNVRMLARSFNVPGDHGGQASTGFRWPFGPVAVVSPFNFPL 480
RYL YG + +AA +REP +E YF RLI RVAPKSY QA EVVVTR+FLENFSG D VR LARSF VPGDH GQ STG RWP+GPVA+++PFNFP
Sbjct: 302 RYLLYGDISHKAAAMLREPHIEHYFIRLIQRVAPKSYIQAKNEVVVTRKFLENFSG---------------------------------------------------------------DQVRFLARSFGVPGDHLGQMSTGHRWPYGPVALITPFNFPF 398 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34338.9167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34338.9167.1 >prot_H-paniculata_contig34338.9167.1 ID=prot_H-paniculata_contig34338.9167.1|Name=mRNA_H-paniculata_contig34338.9167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=167bp RYLTYGLATARAATAMREPEVEDYFTRLIMRVAPKSYAQANAEVVVTRRFback to top mRNA from alignment at H-paniculata_contig34338:1222..1962+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34338.9167.1 ID=mRNA_H-paniculata_contig34338.9167.1|Name=mRNA_H-paniculata_contig34338.9167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=741bp|location=Sequence derived from alignment at H-paniculata_contig34338:1222..1962+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34338:1222..1962+ >mRNA_H-paniculata_contig34338.9167.1 ID=mRNA_H-paniculata_contig34338.9167.1|Name=mRNA_H-paniculata_contig34338.9167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at H-paniculata_contig34338:1222..1962+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |