prot_H-paniculata_contig3430.9158.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3430.9158.1
Unique Nameprot_H-paniculata_contig3430.9158.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length429
Homology
BLAST of mRNA_H-paniculata_contig3430.9158.1 vs. uniprot
Match: D7G3Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI)

HSP 1 Score: 548 bits (1411), Expect = 1.550e-181
Identity = 304/446 (68.16%), Postives = 362/446 (81.17%), Query Frame = 0
Query:    1 MGRVIIPSNKGTSVPTGKN-RETPRVSRSRVHAVCLVMEERAHPSGSSWIGHIKDISVHPGQDGDEEKSTSVATNRNWSLKGMCGVEKR----EKEGSKFTLIFETGGRYVSTTSGTAGRESPYTWEAVSSAACDEILWGLLTMHRAMRASEALEAVN----ELDATAVYHGLASKHPLVPKLARQIRMDERSGN--SAGGVVRELG---DTGG----RRGSGSGRRESDDARANVDKGRRSSKDTTRWDYEEFEQGEAVLGRLKWLEKGREGLLEELSEELDGLEGGTIQQLIAWSEKTDETETLISLLDEVDKQLELMEGWLEQHGRPLESMQVDMSAIERKNNKLDVQWRNYQNLHEYLNNLVEAISITPADEAILRTPQVVLDAALKSADDDAGPAVEKVVASTEALASALAATEKLAKHESTSSLQLLADQRGKLVGLAEV 428
            MGRV+IPS+KG S+PTG N R+ PR SRSRVH+VC+VME+R   +GS W G ++DI+VHPG +G E    +V TNR W++KG+ GVEKR    E EG+ FTL FETG R  S T+   G+ES YTWE V++AACDEILWGLLT++RAM+  + LE VN    ELDATAVYHGLA+KHPLVPKLARQ+R DERS N    G     LG   D GG    RR SG+GRR SD +R++V+K RRSSK   +WDYEEFEQGEAVLGRLKWLEKGREGLLEELS+EL+GLEG TI QLIAWSEKT ETETLIS+LDEVD+QL++MEGWLEQHG+PLE+MQVDM+ IERKNNKLDVQWRNYQNLHEYL +LVEAISI+P++E++LR PQVVLDAAL  +D+D  PAVEKVVA+ E+L++ALA+ E+LA HESTSSLQLLADQR KL+GLAE+
Sbjct:  181 MGRVLIPSSKGASIPTGSNGRDKPRASRSRVHSVCIVMEDRTSSAGSYWSGSVRDITVHPGPEGREFAEKTVVTNRGWNIKGLSGVEKRDGTRETEGAAFTLTFETG-RSSSPTA--VGQESSYTWEGVNAAACDEILWGLLTLNRAMQEGDELEPVNVSLKELDATAVYHGLATKHPLVPKLARQMRADERSRNRGDGGSAANVLGGGLDGGGGGHGRRPSGTGRRGSDLSRSSVEKARRSSKGP-KWDYEEFEQGEAVLGRLKWLEKGREGLLEELSDELEGLEGSTIHQLIAWSEKTAETETLISMLDEVDQQLQVMEGWLEQHGKPLEAMQVDMAEIERKNNKLDVQWRNYQNLHEYLKHLVEAISISPSNESMLRNPQVVLDAALNPSDEDPTPAVEKVVAAAESLSTALASIEQLAAHESTSSLQLLADQRAKLMGLAEI 622          
BLAST of mRNA_H-paniculata_contig3430.9158.1 vs. uniprot
Match: A0A835YUC5_9STRA (Exocyst complex component Sec3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 5.070e-41
Identity = 135/408 (33.09%), Postives = 207/408 (50.74%), Query Frame = 0
Query:   25 VSRSRVHAVCLVMEERAHPSGSSWIGHIKDISVHPGQDGDEEKSTSVATNRNWSLKGMCGVEKREKEGSKFTLIFETGGRYVSTTSGTAGRESPYTWEAVSSAACDEILWGLLTMHRAMRASEALEAV----NELDATAVYHGLASKHPLVPKLARQIRMDE-RSGNSAGGVVRELGDTGGRRGSGSGRRESDDARANVDKGRRSSKDTTRWDYEEFEQGEAVLGRLKWLEKGREGLLEELSEELDGLEGGTIQQLIAWSEKTDETETLISLLDEVDKQLELMEGWLEQHGRPLESMQVDMSAIERKNNKLDVQWRNYQNLHEYLNNLVEAISITPADEAILRTPQVVLDAALKSADDDAGPAVEKVVASTEALASALAATEKLAKHESTSSLQLLADQRGKLVGLAE 427
            +S + + A+ +   ER  P GS   G              E    SV+ + +W ++ + G ++  KEG+  +L F       S  S  +G  + YTWEA S   C E+LW +L++ RA+    + +AV     ELDA+A Y G  +K+P +  L +    +  +   S    +    D           RE+  A A V          T  + EE E+GE +L RL W EKG+EGL   L EEL+ LEG TI QLI WSE  D  +TL+S+LD++D QL +M              Q DM+ IER+NN LDVQWRNY+ L ++L+ LV+AI++   +EA+LR    + + +L     D    ++ V+ ++E+L SA+ A  +L     T+ L+++ D R  L  +A+
Sbjct:  148 LSAAAMSAMIVAQVERLLPRGSGMGGTRM-----------EGTGMSVSLHNSWPIQTLTGADRPNKEGAILSLAFAPKPAGSSNKSA-SGDIAVYTWEAQSPLLCKEVLWVILSLRRALSRGASPDAVAGLAKELDASATYEGFHAKYPKLYGLLKAATSEPAKVVQSTPAALTASKDAQ--------NREAAAAAATV----------TSAELEELERGEELLQRLGWKEKGQEGLEVALDEELENLEGSTIPQLIRWSETEDSAQTLVSILDDIDDQLAVM--------------QRDMAPIERQNNALDVQWRNYRALQDHLSVLVDAITLPFEEEAVLRDFSKMDEYSL-----DKEIVLKSVINASESLLSAVDAGRRLGDAPQTARLRMVTDGRAHLTLVAD 506          
BLAST of mRNA_H-paniculata_contig3430.9158.1 vs. uniprot
Match: A0A7S4RFR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RFR1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.490e-6
Identity = 44/170 (25.88%), Postives = 75/170 (44.12%), Query Frame = 0
Query:  234 EEFEQGEAVLGRLKWLEKG--------------REGLLEELSEELDGLEGGTIQQLIAWSEKTDET---------------------ETLISLLDEVDKQLELMEGWLEQHGRPLESMQVDMSAIERKNNKLDVQWRNYQNLHEYLNNLVEAISITPADEAILRTPQVVL 368
            EE +  E VL  + W ++                E L   L + +  LE  T ++LIAW ++   +                      TL ++LD++D++LE MEGWLE     ++ +  D   IE +N +L+ QW++Y+ L   L  L+  + +    E +L  P  +L
Sbjct:  797 EERKDAEEVLNAISWQQQEITSEGLTSVDAAATAETLAMMLQKRMRDLEAETCRRLIAWEDEKSYSMAGAALGTTAPTRDSVDALSLATLFTMLDQLDEELEKMEGWLEDKAAAVKPLTDDCRDIEEENRQLEQQWKSYETLGSELKRLLSGLEVPKHLERVLSNPGSIL 966          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3430.9158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3Y9_ECTSI1.550e-18168.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUC5_9STRA5.070e-4133.09Exocyst complex component Sec3-domain-containing p... [more]
A0A7S4RFR1_9STRA8.490e-625.88Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..333
NoneNo IPR availablePANTHERPTHR16092SEC3/SYNTAXIN-RELATEDcoord: 19..402
NoneNo IPR availablePANTHERPTHR16092:SF14EXOCYST COMPLEX COMPONENT 1-RELATEDcoord: 19..402
IPR019160Exocyst complex component Sec3, C-terminalPFAMPF09763Sec3_Ccoord: 254..419
e-value: 2.2E-15
score: 56.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3430contigH-paniculata_contig3430:1138..17020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3430.9158.1mRNA_H-paniculata_contig3430.9158.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3430 1138..17032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3430.9158.1 ID=prot_H-paniculata_contig3430.9158.1|Name=mRNA_H-paniculata_contig3430.9158.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=429bp
MGRVIIPSNKGTSVPTGKNRETPRVSRSRVHAVCLVMEERAHPSGSSWIG
HIKDISVHPGQDGDEEKSTSVATNRNWSLKGMCGVEKREKEGSKFTLIFE
TGGRYVSTTSGTAGRESPYTWEAVSSAACDEILWGLLTMHRAMRASEALE
AVNELDATAVYHGLASKHPLVPKLARQIRMDERSGNSAGGVVRELGDTGG
RRGSGSGRRESDDARANVDKGRRSSKDTTRWDYEEFEQGEAVLGRLKWLE
KGREGLLEELSEELDGLEGGTIQQLIAWSEKTDETETLISLLDEVDKQLE
LMEGWLEQHGRPLESMQVDMSAIERKNNKLDVQWRNYQNLHEYLNNLVEA
ISITPADEAILRTPQVVLDAALKSADDDAGPAVEKVVASTEALASALAAT
EKLAKHESTSSLQLLADQRGKLVGLAEV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019160Sec3_C