prot_H-paniculata_contig3418.9127.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3418.9127.1
Unique Nameprot_H-paniculata_contig3418.9127.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
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BLAST of mRNA_H-paniculata_contig3418.9127.1 vs. uniprot
Match: D7FQ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ02_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 6.990e-16
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:  183 LSSTPGASTMAGELRGGELERVQGRAADLGAAIETSQARLLEELSQVQEDFFSSFGYTVP 242
            LS+     ++AGELRGGELERV+GR ADLGAAIETSQ++LL ELSQVQEDFFSSFGY  P
Sbjct:   60 LSARVSVGSVAGELRGGELERVRGRVADLGAAIETSQSKLLRELSQVQEDFFSSFGYATP 119
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3418.9127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ02_ECTSI6.990e-1675.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3418contigH-paniculata_contig3418:36..2912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3418.9127.1mRNA_H-paniculata_contig3418.9127.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3418 36..2914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3418.9127.1 ID=prot_H-paniculata_contig3418.9127.1|Name=mRNA_H-paniculata_contig3418.9127.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
RGPGDPPPPPFLGHSLLAATPRTSTEAAAAVAAGPTWQESEPAAYDDRKI
GATRPRTSGSRSRGRRPGGLPRSTVAISGGGSSGGGGGAEEKGIRLLPLM
ARRKTTATAATSKVAKGGRRSCGSTNDGTARAVGSGSGGDDGHDSSPSKR
GGGKGGQEVRGSRSRGAAERSSGSRRDQSPMRLSSTPGASTMAGELRGGE
LERVQGRAADLGAAIETSQARLLEELSQVQEDFFSSFGYTVPPSSPASYE
HGHRPFAAGGLSATPGAFALAGSTGGDLSSTPAAVTAADRTDDSRSSS
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