prot_H-paniculata_contig3416.9125.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3416.9125.1
Unique Nameprot_H-paniculata_contig3416.9125.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
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BLAST of mRNA_H-paniculata_contig3416.9125.1 vs. uniprot
Match: D7FNN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN1_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.610e-13
Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 0 
Query:  110 CIMDLVEKYCQLAGIKEKEPFCTTVEACAGELDFRHDMCWPDHCPMQKEGCELVSACLTPTVHEMYKDAL 179
            C++D+  +YC + G+KE +P+C+T+E+C    +F  D CWP  CP Q+ GC++ S CLTP + +  +  L
Sbjct:    3 CVIDMAMQYCDVEGVKESDPWCSTLESCIA-TEFVGDECWPSSCPFQEGGCQITSFCLTPEMFDANERVL 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3416.9125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNN1_ECTSI1.610e-1340.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3416contigH-paniculata_contig3416:8178..15795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3416.9125.1mRNA_H-paniculata_contig3416.9125.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3416 7383..15911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3416.9125.1 ID=prot_H-paniculata_contig3416.9125.1|Name=mRNA_H-paniculata_contig3416.9125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MFRKPPTAHESSVLFSPRAPLYAEVLYDWVKTMNVISGGNRLMRWVNPFS
WDRRSSMEKQLAEEMAALQDEALDWVPPPPDPLLYGAGDAYQHLALSTTP
GSYESELEVCIMDLVEKYCQLAGIKEKEPFCTTVEACAGELDFRHDMCWP
DHCPMQKEGCELVSACLTPTVHEMYKDALEAREGDERISLLTVTKTPVSK
DLD*
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