mRNA_H-paniculata_contig11415.912.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.770e-40 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLREVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISG 573 C +DLRP + F+ +LG SPE V T+ ++T N+ L L V + + +L E G++GP++ Q D T EY T + ++V + M R+A RAFPG HTA +++PW+ ++TLE F +G E+ +PS+++LA TVDQG N+INA ALGV + C HRLNTAV WA GI+G Sbjct: 21 CCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMG-ESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG 209
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 155 bits (391), Expect = 4.330e-40 Identity = 79/190 (41.58%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLREVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISG 573 C +DLRP + F+ +LG SPE V T+ ++T N+ L L V + + +L E G++GP++ Q D T EY T + ++V + M R+A RAFPG HTA +++PW+ ++TLE F +G E+ +PS+++LA TVDQG N+INA ALGV + C HRLNTAV WA GI+G Sbjct: 216 CCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMG-ESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAG 404
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 152 bits (383), Expect = 5.150e-39 Identity = 77/191 (40.31%), Postives = 113/191 (59.16%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLREVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGS 576 C ++LRP M F+ +LG SP+ V+ T+ T +KNL +L + V+ + L E G++G ++ Q D T EY T + S+V + + RVA RAFPG HTA ++ PW+ E+T E F +G E+ +P +++LA TVDQGGN++NA ALGV + C HR+NTAV WA GI+G+ Sbjct: 214 CCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMG-EDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGN 403
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 150 bits (380), Expect = 1.320e-38 Identity = 78/200 (39.00%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLRE--------VTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGSI 579 CA+++RP +M ++ +G P+ V+ T+ T N L ++ + + L H ES K G+ GP++ Q D T N EY T S S++ + + RV TRAFPG HTAA++EPW+ + +T E F ++G EN +P +++LA TVDQGGN++NA L VE L C HRLN+ WA GI+GSI Sbjct: 196 CAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMG-ENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSI 394
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.780e-35 Identity = 75/202 (37.13%), Postives = 117/202 (57.92%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLREVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGSISAARGTCRNR 609 C ++LRP M F+ ++G SP+ V T+ TT NK L +L ++ + L + E G+ G ++ Q D T EY T + S+V + + RV+ TRAFPG HTA +++PW+ +TLE ++G + + +++LA TVDQG N++NA ALGV + C HR+N+AV WA GI+GS++ TC+N+ Sbjct: 25 CCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVT----TCKNK 221
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 139 bits (351), Expect = 6.530e-35 Identity = 76/202 (37.62%), Postives = 115/202 (56.93%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLREVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGSISAARGTCRNR 609 C ++ RP M F+ ++G SP+ V T+ TT NK L +L V + L + E G+ G ++ Q D T EY T + S+V + + RV+ TRAFPG HTA +++PW+ +TLE F ++G + + +++LA TVDQG N++NA ALGV + C HR+N+AV WA GI+GS + TC+N+ Sbjct: 25 CCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT----TCKNK 221
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.070e-17 Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 4 CAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRAVMTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYTVSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLRE 384 C +DLRP + F+ +LG SPE V T+ ++T N+ L L V + + +L E G++GP++ Q D T EY T + ++V + M R+A RAFPG HTA +++PW+ + Sbjct: 1300 CCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 5.270e-17 Identity = 50/143 (34.97%), Postives = 83/143 (58.04%), Query Frame = 1 Query: 157 MTAKLAAHYESVKKRGWTGPWISMQCDATRTNNTEYYT-VSFSWVPGDWSGMERVAFCTRAFPGKHTAAEVEPWLREVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGSIS 582 + A+L YE +KK G+ P + +T + +++ V S GD S ++ T+ F G+HT A ++ WL ++T F IV PS++Y+A TVDQG N++NA +LG+ + C GHR++++V W G+SGS++ Sbjct: 9 LVAQLKEAYEELKKIGYHLPRPVLL--STAGLDIDWHRRVLHSLGVGD-SLPVHLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVPA--VVPSDVYVAATVDQGLNVVNACKSLGIPTIPCLGHRIHSSVMWGIGVSGSVA 146
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 3.230e-13 Identity = 39/75 (52.00%), Postives = 55/75 (73.33%), Query Frame = 1 Query: 382 EVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGSISAARGTCRN 606 ++T E FG +G E+ +PS+++LA TVDQGGN++NA ALGV+ + C HR+N+AV WA GI+GS + TCRN Sbjct: 6 QLTKEYFGGFMG-ESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSAT----TCRN 75
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 5.710e-11 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 1 Query: 382 EVTLEAFGPIVGVENCKPSNIYLAITVDQGGNMINAIDALGVECLICFGHRLNTAVSWATGISGSI 579 ++T E F ++G EN +P +++LA TVDQGGN++NA L VE L C HRLN+ WA GI+GSI Sbjct: 2 QLTTEFFADMMG-ENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSI 66 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11415.912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11415.912.1 >prot_H-paniculata_contig11415.912.1 ID=prot_H-paniculata_contig11415.912.1|Name=mRNA_H-paniculata_contig11415.912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp MCAVDLRPYSMSATAAFQHWLGGYSPELVKKTIDRTTINKNLGSLCADVRback to top mRNA from alignment at H-paniculata_contig11415:7123..8145+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11415.912.1 ID=mRNA_H-paniculata_contig11415.912.1|Name=mRNA_H-paniculata_contig11415.912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1023bp|location=Sequence derived from alignment at H-paniculata_contig11415:7123..8145+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11415:7123..8145+ >mRNA_H-paniculata_contig11415.912.1 ID=mRNA_H-paniculata_contig11415.912.1|Name=mRNA_H-paniculata_contig11415.912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig11415:7123..8145+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |