mRNA_H-paniculata_contig3410.9113.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3410.9113.1
Unique NamemRNA_H-paniculata_contig3410.9113.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: D7G718_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G718_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 5.260e-69
Identity = 112/198 (56.57%), Postives = 138/198 (69.70%), Query Frame = 1 
Query:    4 MANIGKGFWTKWIPKNITEKVRRVVEFRPDDPHRTWQVPPANAKN---SLGNKFRYPSPNSQPMASVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQW 588
            MA  G+G + K+IPK+I EK+R V+EF+P DP+R WQVPPA A        N++R P+PNSQP A+VP +D PD  YDIGYFKRDT+RAPR   SY AP LR  L+D +  A  L+  +  P  P  + GNKNPAVLKYDPTGLRSTMSAT+    +S++EYMP HNV+P W    VD + EA+ KGLPPPPGR   W
Sbjct:    1 MAKAGEGLFKKYIPKDIHEKIRNVLEFKPKDPNRGWQVPPAKAATPGLKAKNEYRTPAPNSQPQANVPVSDNPDLQYDIGYFKRDTRRAPRQIHSYVAPSLRM-LADERVKALELISNELGPEDPAPSQGNKNPAVLKYDPTGLRSTMSATNEAWTESLKEYMPTHNVKPWWWHSDVDHVAEAQAKGLPPPPGRRMDW 197
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: W7TSB3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSB3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.000e-36
Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 1 
Query:   40 IPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNK----FRYPSPNSQPMASVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQW 588
            +PK++  K+R    FRPDD +  +  P  N  +  G +    +RYP+P S+P  +VP ++  D++YDI YF  DT+R P +  S++    R  L D  E A  L+G          +PGNKNPAVL YDPTGLRS MSAT+ E+ K++   MPNHNVR +W  +   I+ + + KGLP PPG+  ++
Sbjct:   25 LPKDMQTKIRSWALFRPDDINDLYPFP-RNRISYPGVERIKGYRYPAPGSRPKVNVPQSESDDKLYDIKYFDHDTRRRPAEVFSWSPDFKRVALPDSPEPAK-LMG----------SPGNKNPAVLAYDPTGLRSAMSATNQELEKALDRAMPNHNVRYAWQGEEEQIVKDCEAKGLPVPPGKRAKF 199
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BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A835YW15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW15_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.330e-32
Identity = 80/187 (42.78%), Postives = 107/187 (57.22%), Query Frame = 1 
Query:   43 PKNITEKVRRVVEFRPDDPHRTWQVPPANAK-----NSLGNKFRYPSPNSQPMASVPTTDYP-DRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQ 585
            P  I +K   V+ FRP       QVPPAN +       LG  +RYP+P S+   +VP  D P DR YDI  + RD +    D   +  P ++  L  G +    LLG   P  +   +PGNKNPAVL+YDPTGLRSTMSAT AE +KS++ + P+H  R  WV+D   ++ +A+E GLPPP GR  +
Sbjct:   16 PDEIVDKAIGVLSFRPKVLE-MLQVPPANMRIPGVPRILG--YRYPAPASREAPNVP--DMPADRHYDITRYPRDNRNIKPDNVVFMPPRVKAYLETGSDVTHPLLGAGEPQPKK-GSPGNKNPAVLRYDPTGLRSTMSATWAETDKSLELHRPHHLPRAEWVEDYDKMLKKAEENGLPPPIGRPLR 196
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BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A8K1C7T1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7T1_PYTOL)

HSP 1 Score: 119 bits (297), Expect = 1.630e-27
Identity = 72/193 (37.31%), Postives = 98/193 (50.78%), Query Frame = 1 
Query:   40 IPKNITEKVRRVVEF-RPDDPHRTWQVPPANAKNSLGNKFRYPSPNSQP-MASVPTTDYPDRVYDIGYFKRDTKRAP-------RDETSYAAPELRP-GLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQW 588
            +P  + +K+R ++ F       +  Q+P A        K+RYPSP SQP  A VP++D  +RVY+I Y+ RD +R P            Y  P   P G+S G                   +PGNKNPAVL YDPTG RS MS T    +K I + M  HNVR +W     +I+ E + KG+PP PGR ++W
Sbjct:   16 LPPQLRQKLRELLVFTEATGSSQPGQIPTAE------QKYRYPSPTSQPGSAHVPSSDGKERVYNIQYYTRDIRRMPFPTEVGMHPSLGYVEPAKLPEGVSRG-------------------SPGNKNPAVLAYDPTGTRSAMSTTHEARDKLIIQNMSTHNVRMAWEAQEEEILKECEAKGIPPVPGRPFEW 183
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A7S2WMS8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMS8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.210e-26
Identity = 73/190 (38.42%), Postives = 107/190 (56.32%), Query Frame = 1 
Query:   40 IPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNK---FRYPSPNSQPMASVPTTDYPDRVYDIGYFKRDTKRAPR-DETSYAAPELRPGLSDGKEAATALLGEKAPPNR--PPATPGNKNPA--VLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQ 585
            +P++  +K++++  +RPDD H   QVPPAN K     +   +RYP+P SQ    VP T+  +  YDI YF R+T+R    DE  Y+  +    + +GKE A        PP+   P  +PG    A  V  YDP+GLRS M+AT AE  K++Q +MPNHNV+  W +D   I+   + +GLPP  G  ++
Sbjct:   28 LPQSFQDKLKQLFLYRPDDVHDLHQVPPANMKLDEVKRIQGYRYPAPGSQSTVRVPETENEELDYDIKYFSRNTRRMGHLDEKGYSM-DPSDVIVNGKEIA--------PPDEDTPLGSPGTHYTAATVKAYDPSGLRSAMTATHAETFKAVQAHMPNHNVKYIWENDMDRIVDFYESRGLPPVVGYDFE 208
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A024FXX7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXX7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.070e-25
Identity = 71/190 (37.37%), Postives = 98/190 (51.58%), Query Frame = 1 
Query:   28 WTKWIPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNKFRYPSPNSQPM-ASVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPN--HNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQW 588
            W+  +P  + +++R V+ F+          P +N   S   K+R PSP+SQP    VP+    + VY+I Y+ RDT+R    E    A E+ P +   K         + P   P  +PGNKNPAVL YDPTG RS MS T A MN+ +Q  +    HNV   W     +I+ + +EK LPP PGR  QW
Sbjct:   13 WSSLLPDTVRQRLREVLLFKVAS---GCDQPQSNP--SAEQKYREPSPSSQPKDVHVPSYPNKESVYNIQYYTRDTRRNLAKEF---AVEMHPSIPIKKIV-------ELPEGAPKGSPGNKNPAVLGYDPTGTRSAMSTTHAAMNQLLQRQVETNPHNVHYEWEPFQEEIIRDFEEKNLPPIPGRPCQW 187
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A7S2CFD6_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFD6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.790e-24
Identity = 70/186 (37.63%), Postives = 94/186 (50.54%), Query Frame = 1 
Query:   34 KWIPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNK---FRYPSPNSQPMASVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAY 582
            K IP +  E+++  V FRP+D H   Q+ PAN       +   +RYP+P SQ  A VP T+  DR YDI YF R+ +R    +    +            A     G++ PP   P T     PAV  YDPTGLRS M+A   E  K++Q ++ NHNV P+W D   +I      KGLPP PG  +
Sbjct:   34 KVIPASTWEQMKDAVLFRPNDTHDLHQMWPANMTTEKVPRIKGYRYPAPGSQASARVPDTEDEDRRYDIKYFTRNVRRQGHLDEKGRSTRFADRQIAQANALVVTDGDE-PPIGSPGTHYTL-PAVQAYDPTGLRSAMTANHEETYKAVQAHLANHNVMPAWKDRTDEIAALTTGKGLPPVPGYDF 217
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BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A0P1AK58_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK58_PLAHL)

HSP 1 Score: 110 bits (274), Expect = 2.890e-24
Identity = 68/193 (35.23%), Postives = 98/193 (50.78%), Query Frame = 1 
Query:   28 WTKWIPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNKFRYPSPNSQPMAS-VPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVD-IMMEAKEKGLPPPPGRAYQW*FAN 600
            + K +P  +  K+R+++ F   +   T Q+   N   +    +RYPSP+ Q     VP++D  D +Y+I Y+ RD +R P          + P L   K         + P +    +PGNKNPAVL YDPTG RS MS T    +K IQ+++  HNVR  W  D  D I+ +   K LPP PGR + W F +
Sbjct:   15 YQKLLPAELRNKLRKLLVFT--EATGTKQL---NQSPAFSQGYRYPSPDKQAEGVFVPSSDSKDSIYNINYYTRDIRRFPFP----IEVGMHPSLPIEKRV-------EIPADAKRGSPGNKNPAVLSYDPTGTRSAMSTTHEARDKLIQQHVSTHNVRFEWEGDAEDEILEDCIAKNLPPAPGRPFVWNFPS 191
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: A0A7S2HVM0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVM0_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.100e-24
Identity = 73/195 (37.44%), Postives = 96/195 (49.23%), Query Frame = 1 
Query:   31 TKWIPKNITEKVRRVVE---FRPDDPHRTWQVPPA-----NAKNSLGNKFRYPSPNSQPMASVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPA--VLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQ 585
            T +I + + +K ++V+    FRPDD H   Q PPA     N     G  +RYPSP SQP A +P     D  YDI YF R+T+RA   +    +      L+ G E AT    +         +PG    A  V  YDPT LRS M+AT  E  K+IQ  MP HNV+  W     ++     +KGLPP PG  +Q
Sbjct:   17 TSFIKQILGDKYKQVMSMIVFRPDDTHDLHQAPPARMDMPNVDRIKG--YRYPSPGSQPTAVMPPDANEDLKYDIKYFTRNTRRAGHLDEKSQSTRFSETLALGSELATVDEDQDI------GSPGTHYTAGAVKTYDPTALRSAMTATHGETYKAIQSKMPTHNVKFEWAARLAEMNALTIDKGLPPTPGFNFQ 203
[Close]
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Match: W2QS79_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QS79_PHYPN)

HSP 1 Score: 109 bits (273), Expect = 1.740e-23
Identity = 67/189 (35.45%), Postives = 99/189 (52.38%), Query Frame = 1 
Query:   40 IPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNKFRYPSPNSQPMA-SVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRPGLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDAEMNKSIQEYMPNHNVRPSWVDDGV-DIMMEAKEKGLPPPPGRAYQW*FAN 600
            +P  +  K+R+++ F   +   T QV   N   ++   +RYPSP+ Q    SVP++D  + +Y+I Y+ RD +R P          + P +   K A       + P +    +PGNKNPAVL+YDPTG RS MS T    +K I ++   HNVR  W  D   DI+ + + K LPP PGR + W F +
Sbjct:   81 LPAELRNKLRKMLVFT--EATGTKQV---NQSPAVSQGYRYPSPDKQAEGVSVPSSDSKESIYNIQYYTRDIRRFPFP----TEVGMHPSIPVEKRA-------EIPADAKRGSPGNKNPAVLRYDPTGTRSAMSTTHEARDKLILQHASTHNVRFEWEGDAEKDILEDLEAKNLPPTPGRPFVWDFPS 253
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3410.9113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G718_ECTSI5.260e-6956.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TSB3_9STRA8.000e-3641.18Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A835YW15_9STRA5.330e-3242.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8K1C7T1_PYTOL1.630e-2737.31Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2WMS8_9STRA2.210e-2638.42Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024FXX7_9STRA8.070e-2537.37Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A7S2CFD6_9STRA1.790e-2437.63Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A0P1AK58_PLAHL2.890e-2435.23Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A7S2HVM0_9STRA6.100e-2437.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W2QS79_PHYPN1.740e-2335.45Uncharacterized protein n=8 Tax=Phytophthora paras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3410contigH-paniculata_contig3410:7364..15314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.9
Seed ortholog evalue9.9e-58
Seed eggNOG ortholog2880.D7G718
Hectar predicted targeting categoryother localisation
EggNOG OGs2BKX4@1,2S1JI@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_011410.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1516
Cds size588
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3410.9113.1prot_H-paniculata_contig3410.9113.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3410 8289..15311 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930053.2561498-UTR-H-paniculata_contig3410:7363..82881622930053.2561498-UTR-H-paniculata_contig3410:7363..8288Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3410 7364..8288 -
1691481127.5369976-UTR-H-paniculata_contig3410:7363..82881691481127.5369976-UTR-H-paniculata_contig3410:7363..8288Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3410 7364..8288 -
1622930053.3773875-UTR-H-paniculata_contig3410:15311..153141622930053.3773875-UTR-H-paniculata_contig3410:15311..15314Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3410 15312..15314 -
1691481127.6077397-UTR-H-paniculata_contig3410:15311..153141691481127.6077397-UTR-H-paniculata_contig3410:15311..15314Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3410 15312..15314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930053.273781-CDS-H-paniculata_contig3410:8288..84051622930053.273781-CDS-H-paniculata_contig3410:8288..8405Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 8289..8405 -
1691481127.5462804-CDS-H-paniculata_contig3410:8288..84051691481127.5462804-CDS-H-paniculata_contig3410:8288..8405Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 8289..8405 -
1622930053.2907617-CDS-H-paniculata_contig3410:9922..100691622930053.2907617-CDS-H-paniculata_contig3410:9922..10069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 9923..10069 -
1691481127.5545528-CDS-H-paniculata_contig3410:9922..100691691481127.5545528-CDS-H-paniculata_contig3410:9922..10069Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 9923..10069 -
1622930053.3114133-CDS-H-paniculata_contig3410:11409..115311622930053.3114133-CDS-H-paniculata_contig3410:11409..11531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 11410..11531 -
1691481127.5627441-CDS-H-paniculata_contig3410:11409..115311691481127.5627441-CDS-H-paniculata_contig3410:11409..11531Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 11410..11531 -
1622930053.3296046-CDS-H-paniculata_contig3410:12570..126611622930053.3296046-CDS-H-paniculata_contig3410:12570..12661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 12571..12661 -
1691481127.5709043-CDS-H-paniculata_contig3410:12570..126611691481127.5709043-CDS-H-paniculata_contig3410:12570..12661Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 12571..12661 -
1622930053.3444583-CDS-H-paniculata_contig3410:13176..132271622930053.3444583-CDS-H-paniculata_contig3410:13176..13227Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 13177..13227 -
1691481127.5797079-CDS-H-paniculata_contig3410:13176..132271691481127.5797079-CDS-H-paniculata_contig3410:13176..13227Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 13177..13227 -
1622930053.3576837-CDS-H-paniculata_contig3410:15251..153111622930053.3576837-CDS-H-paniculata_contig3410:15251..15311Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 15252..15311 -
1691481127.5969713-CDS-H-paniculata_contig3410:15251..153111691481127.5969713-CDS-H-paniculata_contig3410:15251..15311Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3410 15252..15311 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3410.9113.1

>prot_H-paniculata_contig3410.9113.1 ID=prot_H-paniculata_contig3410.9113.1|Name=mRNA_H-paniculata_contig3410.9113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MANIGKGFWTKWIPKNITEKVRRVVEFRPDDPHRTWQVPPANAKNSLGNK
FRYPSPNSQPMASVPTTDYPDRVYDIGYFKRDTKRAPRDETSYAAPELRP
GLSDGKEAATALLGEKAPPNRPPATPGNKNPAVLKYDPTGLRSTMSATDA
EMNKSIQEYMPNHNVRPSWVDDGVDIMMEAKEKGLPPPPGRAYQW*
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mRNA from alignment at H-paniculata_contig3410:7364..15314-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3410.9113.1 ID=mRNA_H-paniculata_contig3410.9113.1|Name=mRNA_H-paniculata_contig3410.9113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7951bp|location=Sequence derived from alignment at H-paniculata_contig3410:7364..15314- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAATGGCGAATATTGGAAAGGGGTTCTGGACCAAGTGGATCCCCAAGAA
CATCACGGAGAAGGTGCGCAAAGGGGTTCATCCATTGCCCTCTCATCACA
ACACTTACAGCACACAGTTGTTTGTCTTGAGTTCTGCCTATGAAGTGGAT
TACTGACTCTGCGCGGTCTTGAGTACTGCATCACCGAGTGGATCAATTCT
ACGATCGGGTTGGGTGAGGAACGCACCTCGCAACTCCGTTGCATCATCTA
TAGATACCTGTTCCATTTTTTCGTGCGTGTTCATCAGGCACTGTCTTCCT
TTCCCATGCACACGGGCCGTGTGCTTGTCCTGCACGACTACTGTTGATAA
ATTGACTATTATACTGAACTTTAGAGAATTGTATAAGTATTGCCCTCGCT
GTGCGTTGGAGCTGTGGAGGTGCAAGCAGCCAGTACATGCAGACACGAAA
CCGGCAATAACACTTGAAGCAAATCGGTTATCGTACTACATTTGATGAGA
CACATAAGCCTGTTTAGGCCAAACTCTTGGTGAATGTCCAGGTGGTGGCG
TTCGTATCGTTTAGGCACCGGGTCTGCGTCTTCGCATTGAACCTACAGAT
TTAATGTAGGACACGTAACGTATTGTATGTATTTTAGACACCGATGGTAC
GGCTTACATATTCGCCGGATTCTTTTCATCGAAAGACTTGGACTCAGACG
CGCTCGAACACAACTCACCATCTTCATCACCACCAATACATCACCCCTCA
TCCACCCTGACAGATGCACGCTATTGCTGTACCCTTATCACCATATCATT
GTTGCCATTGACGTGGAGGAGAGAGAGGCCGCCCGCCCCATACACACAGA
GAGCCATGCCCTATAGAAAGAGCAAAACCCAACTATCCAGACGTGAACAA
AATGCTGCAGCAGAGACAACATAGCAGGTAATGAAGGCACAAATTGGTCC
TTACTCTACTGTACACGATGGGTGCCATAGATTGGGTGTTCAAAACTACA
CCTGTCACACTTTCAAAGACAGACCTCTCTTAGCTTCCGTAACTCGTGAA
TGCCCTCTAAGCACGGAGTAAAATAAAAAACTCAAGGTGGCGTGCTTGCA
CCCGACACGCGAAGCGACCTTACCAGCCACTCGTGCATTCTTCAGCAACC
ACGGTTGTCACAATCGCCGTTGACATTGATCTCAAACAAGTATGGCAAAC
ACGCTTCAAGGTTGCAAGAAAGTTCAAGCAAAATCTGTCAAAGCAAGAAG
TCACTCTACTGTACAGTTGTAGGCATAGGAAGATTTTCAACAGATGGCGG
GTGGCGAAACAACGCGCTGTCCGGCAAGAGATTTGGTGATGACCGCGCTG
TGTTTACTGGTGGATTCTGCAATGATAGCTGCTAGTCTCATTCTTGAGTA
CCTAGCATTTTGTGCTTGTAGCAACAAAATGACAAGTTTGGATCTTGCAT
CCCCTGTGATAAGATGTCTTGACGCGCGGTGCATTGCTATAGATGACTCG
TATTCTGGTGAAAGCTGTTGGATGATGACTGGCCTTTTCAGAGGTTTTTG
CTCCGTCAAAACGTGCTTTTGTTTTTGTTCTCTGCGGCCATTCGGTGGTA
GTGGGGCAATTGTCCACTTCGCGTGGTGGTTCGGGCCTTTGCCTTCTTCA
CTTCTGGAGCAGTAGAGTCGCATCGTTTTGCGTGGGTGTCACACTGTTGA
GGCGTTTGTGAGGTCAACCCTGCCACATCTCCAACACGTATTTCATGGTG
TCATGAAGGATCCCCCTTGATGTACTAAAGATCTTCTGCTGTGTTATTTT
GAATTGAAGTTGCGCTGCCTCCTTGACCGCTTCGATACACTCTGTTGCTT
ATTTCGACACTGCCTAAGTTCGGGCTTGTTTGTACTCGCTATGCCCTTGC
CGCTCTACCTGGAATGGTCGTTCCTTCTTTTTCGCTCGAATTTTGCTAAT
GAGTAAATCGCATGAATAACGATATTATTATATATTCGTCAAAAAGTGCA
TAAAACTGTTACCTCTCTCTCTCCCCCCCCCCCCTCCCTTCCGGCCCTTA
CGGGTGGTGTGCCTCGTTCGTCTCGGCGGTGATGCAGGTCCGAAGGGTCG
TCGAATTTAGGCCGGATGACCCCCATCGAACTTGGCAGGTGAGCAACTAT
TGTACGCTTTAAGCAAATCAGGTATTATTCCCGTTTTTTTCGTGCGTGTT
ATTCTCTGTTTTACTGCCTCCACAGTACAAAATGACAATGGTACGATACG
TGCGTTGGCACGGCGATGAGACAGACTCGAAATGTCAGCCACCGCGAAAC
AAGACCGACAGTATCCGTCTTGCAGACATATGCCCTCGTCAACGGTTGCA
CCGCCATTGCCAGAGGTATCGCCTTGAGAAATTCGATATTTCCACAGTGG
ACCCATGCACTCTGCTCACATAGGTACATTTTCATTTTCTCTCAGCGGGC
CTGTTGCTTGAGCGCCCTCCCTCTCCTTGTCGCCCAGGGTCGTGATGTCG
CTCGTTGCCCGCCCGAGTTGACGTCGCCAGTTTATATCCAATGTCTTTCG
GCTGACTTGCCTCCTTCGCGCGTACGATCGATCGCTGCCTTTCCTCACCT
CCCTTGTTATTCGGGTGTGTTTCCTGTCTATTTATTTTTTTCGTGAAAAA
AAGGTGCCCCCGGCGAATGCTAAAAATTCACTCGGGAACAAATTCCGGTA
CCCGTCGCCAAACTCGCAGCCGATGGCAAGCGTGCCCACCACAGGTGCCC
AACACAAGAGGCTGCTGTTTCTTTTTAAGTAAGATGCGTAGCCTTGTTAC
TGTGTATGGGACTGAGGTATTGTTGACTCCTGCGGCTGTGTCACACATTC
CGATCGTCGCGGTTGCTCAAGGTTTGTGAGGACGCGTGACTGCCGAAGCC
ACGTAGAAGATAATATTAAATCATCATCACCTGAGCGATGCCTTGTCAAC
CTTCGTACTCTCAAGGGGCAAGACGTTTCTCTTTCGAAAGAGAGCGTTAT
ATTTATCTACAGACTTGCTGGGGCGCACTCACTTGAGATTTGGAGAAAAT
TCGGGTTTGACAATTGTCATAACTGCAGGCGATACAATTTGCGGTTTTTA
TAATACAACGAGTGGTTTGATGTCACTTGAAGCTCTCGTCGTGGGATTGT
CATAAAGACGATATGTCCTGTTATCCTATACGGAGTCGTCTCTTCTGCTG
ATCTCAATCATGTTCATGAGGTCACGAAAACAAGAACGACCCGCAACCCT
CGACAAAGAATAACGGTTGTGAGCGCTGGCGCAGTGCACGTGGCGCACAA
GCAGTCTGTACAAGATTTCATGTAGCTGTACTACTGAAGTACTTGTTACA
GAGAGGGATCCATCCAGAACATGTAAATAGGGAGAGTCCCCATGGTGATA
TTTTTGGTGATTTGGTCAGGGCTGAGGACAAATGGAAATATAGTGTCTGG
ATGTATAGGTGTGTGGGTGCTTTTTTTAAAGCGGGCAACTTCTGGCGCAA
CCTGGATCAAAACCCTCCGCGTTACGCCTGTCATCGATTAGAAAGAATCA
ATTTCACAACAAGAGTGCCGTTTTTGTGCGCGGGCACACAAAGTCACAGT
TCGGGTTGTCTTGTCGTACCGCAGCCATTTTTTTTCGCCTCTCCTTTCCT
CTTCCCCCCCTTGATTTCATGAGCACGACTGGTCATGTAAACAAAAACTA
TTTCGTAGCTGTAAGAGTTTATTCTTCCATATGGGTATATAACGCGTAAC
ATGGTGCCATTCCCCCCCCCTCTTTCATCGCAGATTACCCGGACAGGGTT
TATGATATAGGTTACTTCAAGAGAGACACGAAAAGGGCGCCCAGAGACGA
AACTAGCTACGCCGCGCCTGAACTCAGGCCAGGCCTCTCGGACGGCAAGG
AAGCGGTGCGTTTACGACCTGACCACTCTCTTGATGTTGGTACTACTGGT
TGCGAAAATTTTAATGCCCTGCTGAGTCGGTCATGTTGGAGGAAAGGCCA
ACTGTTGGCAGTTTTCCTTCTCTTTTTGACATAGTTTGACAGTGATGATT
CAGGTTTCATTTCGCCCTGGGTGAGGAGATGTTGTGCCTCTGAACGCCAG
GGCAGACTCGTCGTGATGTCGGACATTGTTTGGGGAAGTATTGGTGATTG
TGTGGTGAGAGGGACGAAGACAAAACTGCTTGCTCTCCGAGGGGGGGTGC
GTTTTACTCAATTTATGTTTCAATGGCCATTTTGTAGGGGGTCATGTTTG
AATTTTTCCCCCAATATGCTTGTGCTGTAGCATCAGTTAAAGAGAGTGAT
TCGTAATGGAAGCTGCAAGAGCTTGAGCTTCCTCACCCACCTAGTTGCAT
CAAACTTTTTTTGGGGGATGCTCAAGTGCCACTCTCCTCCTCCTCCTCCC
AAAAGTGTCAATTGTCGCGTGGAACAATGAGTTGGTTGGTAGTTTGCATT
CTTCCTACCTCGAGGATACTGAGAAATATCCACACGTCTTTTCTTTTCCT
TGCTCTCCCTCCACACTACCAAACGACAAAGTTGGAACAGTCTGCTCCCT
TTTTATACATGTCACGATCGATTGAATTATGCACGTGAACCCTCAGCAAA
AACCCATCACTTGTTTGTCAAAATCTACTTCCAAGTGGGCACATGATGTT
GCGTGGTGTACTCCCACTGTATCGAAGCCACATTTTCTTGTCGTATATTT
CGCCTTCTTCGTCGCTTCCATCTCAGCGTAGTGTCCAGTCTCTTTTTTTA
TATAACTTTGCTGGTAAGTGTACACCAGTGACGTTCGCGGCATGCTGGAT
AAGCTCAATTTGGGTATAACGATTAGATTTATTATGTGATCGTTAGAGCT
GTGTTTTACTACCTGTACCAAGTGGGCCGACTAGGAAAATGAATCGCGGT
GGGTGTTCCCCCCCTTGTTCGAGTTTGTGCTCTATTGCGTACTATGATTC
GAGTAGCAGTACTATTCTCTGATGCACACAACAGCGGTCATGTGAATTAT
AGAGGATAATACAAAAAACGCGGAGAAGTTTGCGTGGAGTTTCAAAAGGC
ATATATATATATATCCTCAAGAGGGATTTGAGAATTAGGGAACGGTCTAG
GAATTCAGTAGGAACTGTTCTTGTGGTAAGCTTGAAATGTTTTTTTCAAA
AGTGTTGAGAATGTAGCGCACCTCTGAGCTAATTCTCAAGACCCCTCCAC
CGCCTTGTCGTTCTTCCTCAACACTCAAAATTGGATAAAACTCAGGCTAC
CGCGTTACTAGGAGAGAAGGCGCCGCCGAACCGCCCACCCGCCACGCCGG
GAAACAAGAACCCCGCCGTCCTCAAGTACGACCCCACCGGCCTTCGGTCC
ACCATGTCAGCCACAGACGCAGAAATGAACAAGTCCATCCAGGTAGGGAC
AACAGCGTACGAATGCAGCAAGTCCAGTAGTGAACTCCCGTTATATGATC
ATGTCCTGTCCGCTTAAAAAAATCTCGTATGTCGCTTGAAAACCACGAGG
CGTGGGTGATGGACAGCGAGTGCGGGGGGTCGATAGGAGAATGACTCGAA
ATTAATCTTGCAGGACAAACGGTCGACTTCCGAGAAGCAAGGCTGTATTG
GCCGCGAAGCGGTTCTAAAGAGGAAAGGTCACACAGGGTCAACCAGCCGA
ACGACTGGAGGTGGGACCGAGCGGACTACCAACTGGGGACAGTTGATACG
GTTTACACAGACGGCCTTTCACTGTGAAGGATCAACGCGTGATTATTGGT
GGCACTGATTTGGCTGTGTGTGATCCTGGTTGCTCGATGTTTGTCAAACA
TCATTTTGTGAGGCGGTTGTACTGCAGTTTGTCAAAAATTAATCGTTGTT
GTCATGGTTATTTGTTTTATGGTCCTCGCTCTGTCATGATCCGGTTAGAG
TAAAACCAACGGTAATCTATCAGCACTGACCAAAATCGCAAAGCATGCAG
GCCTAATGTGCATTTGACAGGGCACAAACAAGCGTGAGTTAGCCGCAAAA
AACCTCGAAGGGTGAGAACGGCGAGGGCGTGATGAAGGAAAAAATAACAA
ATTCGTTGAAGGTAGTGTCCGCAAAAGCACACCAAGGCCTATTATACCTC
AACAACCTTTTTTTTTTGGTACACTGGGTCAAGCTGTTTTGCATGGTTGT
CCCATCACGCGAGAGCAGAAAACTTCCGACTGCCACATTTCAGCATTGTT
TCAGTATGGGTTCGGTATTGAAGCACAGGTTGCCCATTTCTCGTTTGTAT
GGGGCAATAGCGCCAAGTGTGGTATCATGTTGCTGTCATGGTACATGCGG
CGGACTAAGATACACAGCCTAACACGGTAGTTTCTTACCCTAACAATTTG
GCTATCGAGCGACGGGCGCCCTCATTGACCATGCAATAATATCTCGATGC
ACCCAAAAGGGAAGGATTGACAGGTACATAACCTCGACATACGTACAAGA
GAGTTTTTGATCTCAGGTTTAGAGGTAAACTTGCACTGACTGTGGCACGG
TCATTTTACTGAAGTAATGATAACTTCAGTCAGTGAAACGGAGCGTTGTT
TTTGCTTTTGAGGTGTCAATCGTTTTGGCGAGGACTATTTCATGTTTTAC
CTACAGTGCACTTCCGAGCGATACAGTGACACTCACTTGTGAAGGTTGCT
GTCGTCCATGTGCGTAGTCGCAGATGTGCCATAATTTTCGGTACTTGGTG
ATGATGGGGTCAGAAGTTTGGAAATATGAACAGGATCCTGTCGGTCTACC
CAGCTGCAAACCCAAACTTTCAAGTCCATCTCAAACTTCGGTCCCCCTGG
TGAGCATACTTGTGTGGATCTGGATGAGTTGGTGGCATGGTGATTGAGCA
CTTATTCATGCACAGCCCTTCCCCCTCCTTTGCCCTTTTACCGTCGACCC
CCCTTCCAGGAGTACATGCCCAATCACAATGTCAGACCGTCCTGGGTCGA
CGATGGGGTAGACATTATGATGGAGGCCAAGGAGAAGGGCTTACCCCCCC
CGCCAGGCAGGGCATACCAATGGTGATTTGCCAACTAATAGCATTGTGAA
CCAGGGGTTTGGCGCGGAGATAAAAGTTTTTGCATTGAACATCACTGATG
TTTTTATTTGGAGCACTGCTTTTATAGTACCATTGACTGGCGTGATGGAA
TTCGGGGGAGAGGGGAACGGGACTGTTGCTGGGTGGATTGGTGACGCAGG
TTTTGCGTACATAATTTTATTTTTGGTTGAGAAGTAACGCAATGAGAGTT
TTTGGGTGTTTGATTATGCACTCAAATACGTCCACACGGAGGTTGTCCTT
TTTAATACTACAGGTTGACCCTACGCGGTTGTTTCTCAACCTTGGAAGAA
CATATGTTCGTGGGGCATGCGGGTGCCGAGCTTGAGTGAGTTTTCCTCCC
GAAGGTGGTACATCAACATGGATGCATAGATTGACGGATACCAAGCTTGG
AACGTGATTATTTGTAGGAGACAGGTGGCACCGTCGCTTGTATTCGTGGG
GGAACGGTTGGTCCGGATCTCTCCATGGCGTTCTCTTGGTCTTTTCCGGC
GTAAGACAACGAGGAGGCAGATAAAGATCTGGCACATAGTTGTGGGGCCA
CAGTTGTCGTCCAAAATGCGGGTGTGAAAGTATACGGTATATGATCGGCG
GTGCAAGAATCAGTCGTGGACCACATACCAGGTGCACATCGTTCGACACA
CCGGGTTATTTTGATTAACTCAAGACAGTCTAACCCACAGTCTATCGTGA
GCTGTCGTACAGCGAGGATTCGTTAATGTAAACTCAGGAGGACAAAGTGA
GTCTTTTGTCAACTCTTGGAAACCTATGTGCAAAAATGGGGGCTCATGTC
GGGGGATAGTCCAGCTGATGCATTTTAGAAAGGAAGATATTTGCTTAAAT
ATCCTGTACGAGTCAGGTGCTCATTGATACAACGAATGCTGCAGAATGAC
A
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Coding sequence (CDS) from alignment at H-paniculata_contig3410:7364..15314-

>mRNA_H-paniculata_contig3410.9113.1 ID=mRNA_H-paniculata_contig3410.9113.1|Name=mRNA_H-paniculata_contig3410.9113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig3410:7364..15314- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGAATATTGGAAAGGGGTTCTGGACCAAGTGGATCCCCAAGAACAT
CACGGAGAAGATGGCGAATATTGGAAAGGGGTTCTGGACCAAGTGGATCC
CCAAGAACATCACGGAGAAGGTCCGAAGGGTCGTCGAATTTAGGCCGGAT
GACCCCCATCGAACTTGGCAGGTCCGAAGGGTCGTCGAATTTAGGCCGGA
TGACCCCCATCGAACTTGGCAGGTGCCCCCGGCGAATGCTAAAAATTCAC
TCGGGAACAAATTCCGGTACCCGTCGCCAAACTCGCAGCCGATGGCAAGC
GTGCCCACCACAGGTGCCCCCGGCGAATGCTAAAAATTCACTCGGGAACA
AATTCCGGTACCCGTCGCCAAACTCGCAGCCGATGGCAAGCGTGCCCACC
ACAGATTACCCGGACAGGGTTTATGATATAGGTTACTTCAAGAGAGACAC
GAAAAGGGCGCCCAGAGACGAAACTAGCTACGCCGCGCCTGAACTCAGGC
CAGGCCTCTCGGACGGCAAGGAAGCGATTACCCGGACAGGGTTTATGATA
TAGGTTACTTCAAGAGAGACACGAAAAGGGCGCCCAGAGACGAAACTAGC
TACGCCGCGCCTGAACTCAGGCCAGGCCTCTCGGACGGCAAGGAAGCGGC
TACCGCGTTACTAGGAGAGAAGGCGCCGCCGAACCGCCCACCCGCCACGC
CGGGAAACAAGAACCCCGCCGTCCTCAAGTACGACCCCACCGGCCTTCGG
TCCACCATGTCAGCCACAGACGCAGAAATGAACAAGTCCATCCAGGCTAC
CGCGTTACTAGGAGAGAAGGCGCCGCCGAACCGCCCACCCGCCACGCCGG
GAAACAAGAACCCCGCCGTCCTCAAGTACGACCCCACCGGCCTTCGGTCC
ACCATGTCAGCCACAGACGCAGAAATGAACAAGTCCATCCAGGAGTACAT
GCCCAATCACAATGTCAGACCGTCCTGGGTCGACGATGGGGTAGACATTA
TGATGGAGGCCAAGGAGAAGGGCTTACCCCCCCCGCCAGGCAGGGCATAC
CAATGGTGAGAGTACATGCCCAATCACAATGTCAGACCGTCCTGGGTCGA
CGATGGGGTAGACATTATGATGGAGGCCAAGGAGAAGGGCTTACCCCCCC
CGCCAGGCAGGGCATACCAATGGTGA
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