prot_H-paniculata_contig3409.9110.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3409.9110.1
Unique Nameprot_H-paniculata_contig3409.9110.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length183
Homology
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BLAST of mRNA_H-paniculata_contig3409.9110.1 vs. uniprot
Match: A0A6H5L4A3_9PHAE (TYR_PHOSPHATASE_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A3_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 4.670e-7
Identity = 30/40 (75.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 RRGWVRGRRQAFAQAPNGVGEDVSGWLAPTEEEGHGAGLA 40
            RR WVRGRRQAFAQAPNGVGEDVSGWL   + E  G GL+
Sbjct:  353 RRAWVRGRRQAFAQAPNGVGEDVSGWL-DDDNEVEGDGLS 391
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3409.9110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4A3_9PHAE4.670e-775.00TYR_PHOSPHATASE_2 domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3409contigH-paniculata_contig3409:13633..14181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3409.9110.1mRNA_H-paniculata_contig3409.9110.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3409 13633..14326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3409.9110.1 ID=prot_H-paniculata_contig3409.9110.1|Name=mRNA_H-paniculata_contig3409.9110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
RRGWVRGRRQAFAQAPNGVGEDVSGWLAPTEEEGHGAGLAASGFKSCVEH
EDSGVDAAEITTRAGRRKSFGEPGFSQEDTDAARGGGGRATRLRRKSAPG
QSPRSAEVDGFSKDAGEDEQQEGVEQSPGLSSSGGGGTGASASPVPCKSV
ERCVTRSCTGGESHHACVREPGIAKCGGRRLQ*
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